prot_S-dermatodea_contig9421.17453.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9421.17453.1
Unique Nameprot_S-dermatodea_contig9421.17453.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length153
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9421.17453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..104
NoneNo IPR availableTMHMMTMhelixcoord: 87..106
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9421contigS-dermatodea_contig9421:996..1454 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9421.17453.1mRNA_S-dermatodea_contig9421.17453.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9421 725..1454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9421.17453.1 ID=prot_S-dermatodea_contig9421.17453.1|Name=mRNA_S-dermatodea_contig9421.17453.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=153bp
MYFLFVYRTTVLKKKGQGHVPIGTLVRVCVCVGVYVFFFCEINLWRLYLM
TRFQCYLIFVLCRESNNTRLEHWHRTRATRLPRNKHVRALFSPFFFVLFC
FVFSRGNNGKEQKNCFVYLIGKVSIMRPPPPVSARICTKVSFSPKSVLVR
AGC
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