prot_S-dermatodea_contig9382.17423.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9382.17423.1
Unique Nameprot_S-dermatodea_contig9382.17423.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length369
Homology
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BLAST of mRNA_S-dermatodea_contig9382.17423.1 vs. uniprot
Match: A0A6H5K9R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R7_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 1.820e-121
Identity = 196/297 (65.99%), Postives = 230/297 (77.44%), Query Frame = 0 
Query:   73 FRHSSAVYIEMTDMYGIVYHANYLTYAQRAIERAFGSPAPRIHSIHDMKYRAAATIGELAIVEGNLISHDSSC---GRSRWRFQIAAA-DPSRVFVSAEATLSWPGGAAREALPPGQSPPPTSAEVAGDMQSKSAD--CRADVQLLASLPNEFADSPKTLSVTVWSDDLERGESVCNLSIRAVLNYFERIRTLSLGRGPDGELGLVRLHREGISIVVTNISDLRVDSGGVAAGDNLEVRLGAKLTRGNRAMTMYQTLWREDGTLLAHAEIALLCMDNETRKFRSVPPWVQDILTVPS 363
            FRH S VYIEMTDMY IVYHANY+TYAQRAIE AFG+P  R+HS+  +KYRAAAT+G+   V+G L+S D S    GRSRWRF++AAA DPSRVFV+AEAT+SWPGGAA   +PPG         VA     +SA+     D +LL  LP  F D PK L V VWSDDL+ G    NLSIRAVLNYFERIRTLSLGRG DGELGL+RLHREG+S+VVT+ISDLRV+S G+ AG+ L+VRLGAKL+RGNR MTMY++LW+E+GTL+AHAEIAL CMDNETRKFR VP WVQ  + +PS
Sbjct:   81 FRHCSTVYIEMTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVHSLPIVKYRAAATLGDEIAVQGTLVSCDDSSSGGGRSRWRFELAAASDPSRVFVTAEATVSWPGGAA---MPPG---------VAVIKLPRSAEPTMSDDTELLQPLPEAFTDPPKALKVVVWSDDLDVGG---NLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLWKENGTLVAHAEIALFCMDNETRKFRPVPEWVQVAIMLPS 362
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BLAST of mRNA_S-dermatodea_contig9382.17423.1 vs. uniprot
Match: D8LB89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB89_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 7.350e-119
Identity = 191/287 (66.55%), Postives = 224/287 (78.05%), Query Frame = 0 
Query:   83 MTDMYGIVYHANYLTYAQRAIERAFGSPAPRIHSIHDMKYRAAATIGELAIVEGNLISHDSSC---GRSRWRFQIAAA-DPSRVFVSAEATLSWPGGAAREALPPGQSPPPTSAEVAGDMQSKSAD--CRADVQLLASLPNEFADSPKTLSVTVWSDDLERGESVCNLSIRAVLNYFERIRTLSLGRGPDGELGLVRLHREGISIVVTNISDLRVDSGGVAAGDNLEVRLGAKLTRGNRAMTMYQTLWREDGTLLAHAEIALLCMDNETRKFRSVPPWVQDILTVPS 363
            MTDMY IVYHANY+TYAQRAIE AFG+P  R+HS+  +KYRAAAT+GE   V+G L+S D S    GRSRWRF++AAA DPSRVFV+AEAT+SW GGAA   +PPG         VA     +SA+     D +LL  LP  F DSPKTL V VWSDDL+ G    NLSIRAVLNYFERIRTLSLGRG DGELGL+RLHREG+S+VVT+ISDLRV+S G+ AG+ L+VRLGAKL+RGNR MTMY++LWRE+GTL+AHAEIAL CMDNETRKFR VP WVQ+ + +PS
Sbjct:    1 MTDMYRIVYHANYVTYAQRAIEHAFGAPGVRVHSLPIVKYRAAATLGEEITVQGTLVSCDDSSSGGGRSRWRFELAAASDPSRVFVTAEATVSWLGGAA---MPPG---------VAVSKLPRSAEPTMTDDTELLQPLPEAFTDSPKTLKVVVWSDDLDGGG---NLSIRAVLNYFERIRTLSLGRGQDGELGLMRLHREGVSVVVTSISDLRVNSDGLVAGETLDVRLGAKLSRGNRVMTMYESLWRENGTLVAHAEIALFCMDNETRKFRPVPEWVQEAIMLPS 272
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BLAST of mRNA_S-dermatodea_contig9382.17423.1 vs. uniprot
Match: A0A835YTJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ2_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.120e-22
Identity = 90/310 (29.03%), Postives = 140/310 (45.16%), Query Frame = 0 
Query:   63 GSETEDSLLPFRHSSAVYIEMTDMYGIVYHANYLTYAQRAIERAFGSPAPRIHSIHDMKYRAAATIGELAIVEGNLISHDSSCGRSRWRFQIA-AADPSRVFVSAEATLSWPGGAAREALPPGQSPPPTSAEVAGDMQSKSADCRADVQLLASLPNEFADSPKTLSVTVWSDDLERGESVCNLSIRAVLNYFERIRTLSLGRGPDGELGLVRLHREGISIVVTNISDLRVD-SGGVAAGDNLEVRLGAKLTRGNRAMTMYQTLWRE------DGTLLAHAEIALLCMDNETRKFRSVPPWVQDILTVPSN 364
            GS++      F       +E TDM+G +YH NY+ +  RA ++  G     I  +  ++YR AA +G+  ++ G   S D+      W+  +  A +  RVFV+A   L                               +A   A    LA        S +   +  + D+L    +   LS  +V+NY ER RTLSLG     E GL RLH++G  IV++ ISDLR+D +  +A G  LEV       R  R +++ Q ++ +         L+AHA + LLC+D  T+K  + P W+ + L V S+
Sbjct:   40 GSDSASEGRAFAIEQLCMVEDTDMFGHMYHGNYIKWLARASQKCLGHDTVLI-GVDALRYRNAAVLGDNMVISGTF-SEDAQA----WQCSVVDARNEKRVFVTASVLLG------------------------------TASSDAGASALAGKVESVPQSAQYFDMVAYGDELGADGA---LSPSSVINYMERTRTLSLG---PPEEGLYRLHKQGTDIVISRISDLRLDHTVRIAPGAELEVVNSGSANR--RTVSVRQRVYVKAPDEVSGRRLIAHATVELLCIDGATKKLSAFPDWILERLHVISS 305
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9382.17423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9R7_9PHAE1.820e-12165.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB89_ECTSI7.350e-11966.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTJ2_9STRA1.120e-2229.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.129.10coord: 228..367
e-value: 3.2E-10
score: 41.6
NoneNo IPR availableGENE3D3.10.129.10coord: 61..184
e-value: 2.1E-10
score: 42.5
NoneNo IPR availablePANTHERPTHR31793FAMILY NOT NAMEDcoord: 73..109
NoneNo IPR availablePANTHERPTHR31793:SF9ACYL-COA THIOESTER HYDROLASE YBGCcoord: 73..109
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..368
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.66
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 71..180
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 248..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9382contigS-dermatodea_contig9382:4884..6623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9382.17423.1mRNA_S-dermatodea_contig9382.17423.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9382 4822..7000 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9382.17423.1 ID=prot_S-dermatodea_contig9382.17423.1|Name=mRNA_S-dermatodea_contig9382.17423.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=369bp
MRKNWLRASSWVLLGELLVVNGFVQSVQTSSRPISRTNPRQQQALATTDV
PVAQVSEAPRQAGSETEDSLLPFRHSSAVYIEMTDMYGIVYHANYLTYAQ
RAIERAFGSPAPRIHSIHDMKYRAAATIGELAIVEGNLISHDSSCGRSRW
RFQIAAADPSRVFVSAEATLSWPGGAAREALPPGQSPPPTSAEVAGDMQS
KSADCRADVQLLASLPNEFADSPKTLSVTVWSDDLERGESVCNLSIRAVL
NYFERIRTLSLGRGPDGELGLVRLHREGISIVVTNISDLRVDSGGVAAGD
NLEVRLGAKLTRGNRAMTMYQTLWREDGTLLAHAEIALLCMDNETRKFRS
VPPWVQDILTVPSNAAAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029069HotDog_dom_sf