prot_S-dermatodea_contig93580.17402.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig93580.17402.1
Unique Nameprot_S-dermatodea_contig93580.17402.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length78
Homology
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A8F0F7A6_9PHAE (Ribosomal protein S16 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A6_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.280e-37
Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLKIRFKR GRKKQPFYRIV+M+ KTKRDG V+EELGFYNPLNK FQINR RTIIRLDNGA+PTEVLKNL  +S IF
Sbjct:    1 MLKIRFKRCGRKKQPFYRIVLMDNKTKRDGNVVEELGFYNPLNKTFQINRVRTIIRLDNGAQPTEVLKNLFRKSNIF 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A1I9LW03_9PHAE (30S ribosomal protein S16, chloroplastic n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A1I9LW03_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.110e-33
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLKIRFKR GRKKQPFYRIVVM+ KTKRDGK +EELGFY+P+NK FQINR RTIIRL NG +PTEV+KNLL+++  F
Sbjct:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKALEELGFYDPMNKTFQINRERTIIRLANGVQPTEVVKNLLIRAFKF 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: D1J702_ECTSI (30S ribosomal protein S16, chloroplastic n=32 Tax=Phaeophyceae TaxID=2870 RepID=D1J702_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.430e-31
Identity = 58/77 (75.32%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLKIRFKR GRKKQPFYRIVVM+ KTKRDGKV+EELGFY+P+ K F INR RTI RL NG +PTEV+KNLL +S  F
Sbjct:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A8F0FAS3_9PHAE (Ribosomal protein S16 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAS3_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.180e-30
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLKIRFK  GRKKQPFYRIVVM+ +TKRDGKV+EELGFYNP+NK   INR RTI RL++GA+PTEV+KNLL ++  F
Sbjct:    1 MLKIRFKLCGRKKQPFYRIVVMDVRTKRDGKVLEELGFYNPMNKTLHINRERTISRLNHGAQPTEVVKNLLRKTPGF 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A141BSI6_9PHAE (30S ribosomal protein S16, chloroplastic n=16 Tax=Fucales TaxID=3009 RepID=A0A141BSI6_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.370e-30
Identity = 55/77 (71.43%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLKIRFKR GRKKQPFY+IVVM+ +TKRDGK +EELGFYNP+ K   IN  RTI RL NG +PTEV+KNLL +S IF
Sbjct:    1 MLKIRFKRTGRKKQPFYKIVVMDVRTKRDGKALEELGFYNPITKTLNINCERTISRLKNGVQPTEVVKNLLRKSSIF 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A2I4Q2M7_9PHAE (30S ribosomal protein S16, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2M7_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.370e-30
Identity = 56/77 (72.73%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLKIRFKR GRKK PFYRIVV+N +TKRDGKVIEELG YNPL K  +IN  RTIIRL++GA+PTEV+KNL  +S +F
Sbjct:    1 MLKIRFKRGGRKKHPFYRIVVINNRTKRDGKVIEELGSYNPLTKIIKINLVRTIIRLEDGAQPTEVVKNLFRKSSLF 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A8E5XRF9_9PHAE (30S ribosomal protein S16, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRF9_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 2.930e-29
Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLKIR KR+GRKK+PFYRIV+M+  TKRDGK IEELGFYNPLNK F INR R I+R+  GA+PT+++ NLL +S+ F
Sbjct:    1 MLKIRLKRFGRKKKPFYRIVLMDASTKRDGKAIEELGFYNPLNKIFYINRERIIMRIKTGAQPTQIVSNLLKKSKFF 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A7S6UA28_9STRA (30S ribosomal protein S16, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA28_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.010e-27
Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQI 76
            MLK+R KR GRKK+PFYRIVVMN KTKRDGK IE+LG+YNP+ K F +NR RT+ RL+ G  PT+V+KNLL ++ I
Sbjct:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKADI 76          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: B7T1T4_VAULI (30S ribosomal protein S16, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1T4_VAULI)

HSP 1 Score: 97.4 bits (241), Expect = 6.080e-25
Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLK+R KR GRKKQPFY+IVVMN  ++RDG  IEELGFYNPLNK F+IN+ RTI RL  G +PT  L +LL +  I 
Sbjct:    1 MLKLRLKRCGRKKQPFYKIVVMNANSRRDGFAIEELGFYNPLNKTFKINKGRTIYRLKQGVQPTATLIDLLKKVNIL 77          
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Match: A0A8E5BGR9_9PHAE (Ribosomal protein S16 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BGR9_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.150e-24
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINRARTIIRLDNGAKPTEVLKNLLLQSQIF 77
            MLK+R KR GRK QPF++I++M+ KTKRDGK IEELGFYNP+ K    N  RTI  L+NG +PTEV+K+LL +S  F
Sbjct:    1 MLKMRLKRCGRKNQPFFKILIMDVKTKRDGKAIEELGFYNPIMKIISFNHKRTIYWLNNGVQPTEVIKDLLNKSPFF 77          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig93580.17402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F7A6_9PHAE2.280e-3783.12Ribosomal protein S16 n=1 Tax=Protohalopteris sp. ... [more]
A0A1I9LW03_9PHAE2.110e-3376.6230S ribosomal protein S16, chloroplastic n=2 Tax=C... [more]
D1J702_ECTSI1.430e-3175.3230S ribosomal protein S16, chloroplastic n=32 Tax=... [more]
A0A8F0FAS3_9PHAE1.180e-3072.73Ribosomal protein S16 n=1 Tax=Desmarestia aculeata... [more]
A0A141BSI6_9PHAE3.370e-3071.4330S ribosomal protein S16, chloroplastic n=16 Tax=... [more]
A0A2I4Q2M7_9PHAE3.370e-3072.7330S ribosomal protein S16, chloroplastic n=1 Tax=D... [more]
A0A8E5XRF9_9PHAE2.930e-2967.5330S ribosomal protein S16, chloroplastic n=1 Tax=I... [more]
A0A7S6UA28_9STRA1.010e-2765.7930S ribosomal protein S16, chloroplastic n=1 Tax=S... [more]
B7T1T4_VAULI6.080e-2563.6430S ribosomal protein S16, chloroplastic n=1 Tax=V... [more]
A0A8E5BGR9_9PHAE2.150e-2461.04Ribosomal protein S16 n=1 Tax=Phaeophyceae sp. Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 8..64
e-value: 9.1E-20
score: 70.5
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 2..77
e-value: 4.2E-29
score: 98.4
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 2..76
IPR000307Ribosomal protein S16HAMAPMF_00385Ribosomal_S16coord: 1..74
score: 22.503
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..77
e-value: 5.5E-26
score: 92.7
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 1..75
NoneNo IPR availablePANTHERPTHR12919:SF31coord: 2..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig93580contigS-dermatodea_contig93580:303..536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig93580.17402.1mRNA_S-dermatodea_contig93580.17402.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig93580 303..536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig93580.17402.1 ID=prot_S-dermatodea_contig93580.17402.1|Name=mRNA_S-dermatodea_contig93580.17402.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=78bp
MLKIRFKRYGRKKQPFYRIVVMNTKTKRDGKVIEELGFYNPLNKNFQINR
ARTIIRLDNGAKPTEVLKNLLLQSQIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf