prot_S-dermatodea_contig9318.17369.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9318.17369.1
Unique Nameprot_S-dermatodea_contig9318.17369.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length99
Homology
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A6H5JL66_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL66_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.610e-16
Identity = 33/57 (57.89%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   43 PAKFSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG 99
            P+ FSEAID +G+GPFQ+RL ++CG+GW +D++E++V++F LE +A SF L SVGKG
Sbjct:   53 PSTFSEAIDRVGLGPFQKRLVIICGLGWAVDSMEVLVLAFALEAIATSFELSSVGKG 109          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A2N1S9R7_9SPIR (MFS transporter n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-3 TaxID=2013835 RepID=A0A2N1S9R7_9SPIR)

HSP 1 Score: 58.9 bits (141), Expect = 5.210e-8
Identity = 24/54 (44.44%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   46 FSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG 99
            F EA++ +G G FQRRL V+CG+GW  DA+E++++SF L  ++  ++L +  KG
Sbjct:    6 FDEALEKVGYGRFQRRLLVICGLGWAADAMEVLLVSFALPAMSAEWSLSAAQKG 59          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A3D1JEE6_9CHLR (Arabinose efflux permease n=2 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=A0A3D1JEE6_9CHLR)

HSP 1 Score: 57.0 bits (136), Expect = 2.480e-7
Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   46 FSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG 99
            F EAI+  G+G FQR+L ++CG+GW  DA+E+++ISF L  +   + L +  KG
Sbjct:    7 FDEAIEHAGLGRFQRKLMIICGLGWAADAMEVLLISFALPAIGEEWGLSNAQKG 60          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A3N5RFR2_9CHLR (MFS transporter n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5RFR2_9CHLR)

HSP 1 Score: 56.6 bits (135), Expect = 3.390e-7
Identity = 23/54 (42.59%), Postives = 39/54 (72.22%), Query Frame = 0
Query:   46 FSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG 99
            + +AI+ +G G FQ++L V+CG+GW  DA+E+++I+FVL  +   +NL +  KG
Sbjct:   10 YDQAIEQVGFGRFQKKLMVICGLGWAADAMEVLLIAFVLPVIGEEWNLTNTQKG 63          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A3N5WNN0_9CHLR (MFS transporter n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5WNN0_9CHLR)

HSP 1 Score: 55.1 bits (131), Expect = 1.180e-6
Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   46 FSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG 99
            F +AI   G G FQ++L V+CG+GW  DA+E+++ISF L  ++  +NL +  +G
Sbjct:    8 FDDAIQHAGFGRFQKKLRVICGLGWAADAMEVLLISFALPSISQEWNLTNAQRG 61          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A6H5JUA1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUA1_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.190e-6
Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 0
Query:   64 VMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG 99
            V+C  GWVIDA+EI+V++FVLED+A +F LGSVGKG
Sbjct:   12 VICCNGWVIDAMEILVVAFVLEDIATTFELGSVGKG 47          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A7C5JVG9_9CHLR (MFS transporter n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C5JVG9_9CHLR)

HSP 1 Score: 54.7 bits (130), Expect = 1.610e-6
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   46 FSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG 99
            F EAI+ +G G FQR+L  +CG GW  DA+E+++ISFV+  V   + L +   G
Sbjct:    7 FDEAIERVGFGRFQRKLLWICGAGWAADAMEVIIISFVIPAVIREWGLSAAQAG 60          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: C1D1E7_DEIDV (Putative Major Facilitator Superfamily (MFS_1) transporter n=3 Tax=Deinococcus TaxID=1298 RepID=C1D1E7_DEIDV)

HSP 1 Score: 54.3 bits (129), Expect = 2.210e-6
Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 0
Query:   38 TPALSPAKFSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNL 93
            TP         AID +G+GPFQ RL ++CG+ W  DA+E++++ F L  +A SF L
Sbjct:    5 TPPAGAMSVDAAIDGLGLGPFQWRLLLICGLTWAADAMEVLLMGFALPGIAESFGL 60          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A7X1NUH3_9DEIO (MFS transporter n=2 Tax=Deinococcus TaxID=1298 RepID=A0A7X1NUH3_9DEIO)

HSP 1 Score: 53.5 bits (127), Expect = 4.120e-6
Identity = 21/56 (37.50%), Postives = 36/56 (64.29%), Query Frame = 0
Query:   38 TPALSPAKFSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNL 93
            T +  P    +A+D +G+GPFQ RL  +CG+ W  DA+E++++ F L  ++ +F L
Sbjct:    2 TSSARPISLDDAVDRLGLGPFQWRLLAICGLTWAADAMEVLLMGFALPGISAAFGL 57          
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Match: A0A7C3NTT0_9DELT (MFS transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3NTT0_9DELT)

HSP 1 Score: 52.8 bits (125), Expect = 7.640e-6
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   46 FSEAIDAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNL 93
            F +AI  +G G FQ +L V+CG+GW  DA+E+++ISFV+  V   +NL
Sbjct:    3 FEDAIGEVGFGRFQIKLMVLCGLGWAADAMEVLLISFVIPAVRKEWNL 50          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9318.17369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JL66_9PHAE7.610e-1657.89MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2N1S9R7_9SPIR5.210e-844.44MFS transporter n=1 Tax=Spirochaetae bacterium HGW... [more]
A0A3D1JEE6_9CHLR2.480e-744.44Arabinose efflux permease n=2 Tax=Anaerolinea ther... [more]
A0A3N5RFR2_9CHLR3.390e-742.59MFS transporter n=1 Tax=Chloroflexi bacterium TaxI... [more]
A0A3N5WNN0_9CHLR1.180e-642.59MFS transporter n=1 Tax=Chloroflexi bacterium TaxI... [more]
A0A6H5JUA1_9PHAE1.190e-669.44MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7C5JVG9_9CHLR1.610e-644.44MFS transporter n=1 Tax=Chloroflexi bacterium TaxI... [more]
C1D1E7_DEIDV2.210e-642.86Putative Major Facilitator Superfamily (MFS_1) tra... [more]
A0A7X1NUH3_9DEIO4.120e-637.50MFS transporter n=2 Tax=Deinococcus TaxID=1298 Rep... [more]
A0A7C3NTT0_9DELT7.640e-647.92MFS transporter n=1 Tax=Deltaproteobacteria bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..99
NoneNo IPR availableTMHMMTMhelixcoord: 62..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9318contigS-dermatodea_contig9318:319..3420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9318.17369.1mRNA_S-dermatodea_contig9318.17369.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9318 319..3420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9318.17369.1 ID=prot_S-dermatodea_contig9318.17369.1|Name=mRNA_S-dermatodea_contig9318.17369.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=99bp
MDTTQAEATGAGGRDQEMRSMDGYEVPSVGERRASSATPALSPAKFSEAI
DAIGMGPFQRRLAVMCGMGWVIDALEIVVISFVLEDVAISFNLGSVGKG
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