prot_S-dermatodea_contig9282.17347.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9282.17347.1
Unique Nameprot_S-dermatodea_contig9282.17347.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length122
Homology
BLAST of mRNA_S-dermatodea_contig9282.17347.1 vs. uniprot
Match: A0A6H5L705_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L705_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.430e-59
Identity = 98/115 (85.22%), Postives = 108/115 (93.91%), Query Frame = 0
Query:    2 GIISRVKGIQDRAGRTQAKLHSYNAILLKIKSLHAWSDPGRTRAWVAAVSLVAAVLAIVPARYTFAAMVLFLFTEPVRPKGKTIPELLFEDFWGGLPVESGTHTNVRMAAIYSRH 116
            GIISRVKG+QDRAGRTQAKLH+YNA+LL++KSLHAWSDPGRT+ W AAVSL+AAVLAIVPARYTFAA+VLFLFTEP+RP+ K I ELL EDFW GLPVESGTHTNVRMAAIYSRH
Sbjct:  416 GIISRVKGMQDRAGRTQAKLHAYNAVLLRVKSLHAWSDPGRTKVWAAAVSLLAAVLAIVPARYTFAALVLFLFTEPIRPETKNIAELLLEDFWEGLPVESGTHTNVRMAAIYSRH 530          
BLAST of mRNA_S-dermatodea_contig9282.17347.1 vs. uniprot
Match: D8LLQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ6_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 5.460e-59
Identity = 91/107 (85.05%), Postives = 100/107 (93.46%), Query Frame = 0
Query:   10 IQDRAGRTQAKLHSYNAILLKIKSLHAWSDPGRTRAWVAAVSLVAAVLAIVPARYTFAAMVLFLFTEPVRPKGKTIPELLFEDFWGGLPVESGTHTNVRMAAIYSRH 116
            +QDRAGRTQAKLH+YNA+LL++KSLHAWSDPGRT+ W AAVSL+AA+LAIVPARYTFAA+VLFLFTEPVRPK K I ELL EDFW GLPVESGTHTNVRMAAIYSRH
Sbjct:    1 MQDRAGRTQAKLHAYNAVLLRVKSLHAWSDPGRTKVWAAAVSLLAALLAIVPARYTFAALVLFLFTEPVRPKTKNIAELLLEDFWEGLPVESGTHTNVRMAAIYSRH 107          
BLAST of mRNA_S-dermatodea_contig9282.17347.1 vs. uniprot
Match: A0A835YWJ6_9STRA (PRT_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ6_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.780e-31
Identity = 56/97 (57.73%), Postives = 74/97 (76.29%), Query Frame = 0
Query:   18 QAKLHSYNAILLKIKSLHAWSDPGRTRAWVAAVSLVAAVLAIVPARYTFAAMVLFLFTEPVRPKGKTIPELLFEDFWGGLPVESGTHTNVRMAAIYS 114
            QAKLH+YN  LLK++SL AW+DP RT+ +V  +   A +LA +P RYT+A  V+FLFT+P+R   KT+PELL +DFW GLPV+S  HTN+ MAAIY+
Sbjct:    2 QAKLHAYNVALLKLRSLVAWTDPTRTKVFVLFLLFAALLLATIPLRYTWAGAVVFLFTKPLRSMKKTVPELLLDDFWRGLPVDSALHTNLDMAAIYT 98          
BLAST of mRNA_S-dermatodea_contig9282.17347.1 vs. uniprot
Match: D8LLQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ4_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 4.660e-21
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:   67 AAMVLFLFTEPVRPKGKTIPELLFEDFWGGLPVESGTHTNVRMAAIYSRH 116
            AA+VLFLFTEPVRPK K I ELL EDFW GLPVESGTHTNVRMAAIYSRH
Sbjct:  103 AALVLFLFTEPVRPKTKNIAELLLEDFWEGLPVESGTHTNVRMAAIYSRH 152          
BLAST of mRNA_S-dermatodea_contig9282.17347.1 vs. uniprot
Match: A0A7S1CBD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBD2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.270e-13
Identity = 32/77 (41.56%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    3 IISRVKGIQDRAGRTQAKLHSYNAILLKIKSLHAWSDPGRTRAWVAAVSLVAAVLAIVPARYTFAAMVLFLFTEPVR 79
            ++ R + ++D  GRTQ ++H +N +LLK++SL+AW +P RTR  +A       + ++VP R  FAA V+FLF  P+R
Sbjct:   38 LLDRFRRLRDTLGRTQRRMHRWNMVLLKMRSLYAWQEPSRTRMLIAGNLFFVLLFSVVPFRLLFAAFVIFLFARPLR 114          
BLAST of mRNA_S-dermatodea_contig9282.17347.1 vs. uniprot
Match: M1UP16_CYAM1 (GRAM domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UP16_CYAM1)

HSP 1 Score: 51.6 bits (122), Expect = 4.390e-5
Identity = 27/63 (42.86%), Postives = 40/63 (63.49%), Query Frame = 0
Query:   17 TQAKLHSYNAILLKIKSLHAWSDPGRTRAWVAAVSLVAAVLAIVPARYTFAAMVLFLFTEPVR 79
            TQ  L   N  L K +S+H W DP RTR ++  + + A ++A+VP R+ FAA+V++LFT   R
Sbjct:  702 TQVWLQHMNRHLEKFESIHLWRDPARTRQYIYGLVVSALLIAVVPFRWIFAALVIYLFTLQFR 764          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9282.17347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L705_9PHAE1.430e-5985.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLQ6_ECTSI5.460e-5985.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YWJ6_9STRA2.780e-3157.73PRT_C domain-containing protein n=1 Tax=Tribonema ... [more]
D8LLQ4_ECTSI4.660e-2188.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CBD2_9STRA4.270e-1341.56Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
M1UP16_CYAM14.390e-542.86GRAM domain-containing protein n=1 Tax=Cyanidiosch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..121
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9282contigS-dermatodea_contig9282:3133..4599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9282.17347.1mRNA_S-dermatodea_contig9282.17347.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9282 2197..4599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9282.17347.1 ID=prot_S-dermatodea_contig9282.17347.1|Name=mRNA_S-dermatodea_contig9282.17347.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
EGIISRVKGIQDRAGRTQAKLHSYNAILLKIKSLHAWSDPGRTRAWVAAV
SLVAAVLAIVPARYTFAAMVLFLFTEPVRPKGKTIPELLFEDFWGGLPVE
SGTHTNVRMAAIYSRHKLKID*
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