prot_S-dermatodea_contig9277.17339.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9277.17339.1
Unique Name	prot_S-dermatodea_contig9277.17339.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	126

Homology

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BLAST of mRNA_S-dermatodea_contig9277.17339.1 vs. uniprot
Match: D8LFG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG6_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 4.700e-17
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 0

Query:   29 IAWDERTDAVQMGWAYIVGREVI--DKCVLSVVDTIGWRWAGLLFSYVWLSSLVLGQSLVVRLCCGKLREAERGAALKTAVVQAWRALVFTNVVLAPK 124
            + WDER   V    AY+ G      + C+  V++T GWRW  +LFSY WL  L + Q  ++RLCCGKL+  ER  A  T + + W + +F NVVLAP+
Sbjct:    1 MGWDERDHVVGACTAYLSGDPDTRPEHCLSKVIETFGWRWGFVLFSYSWLVFLWIVQGALIRLCCGKLKPVERARATATVLGKVWSSFLFVNVVLAPE 98

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BLAST of mRNA_S-dermatodea_contig9277.17339.1 vs. uniprot
Match: A0A6H5KCR0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR0_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 9.360e-17
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0

Query:   29 IAWDERTDAVQMGWAYIVGREVI--DKCVLSVVDTIGWRWAGLLFSYVWLSSLVLGQSLVVRLCCGKLREAERGAALKTAVVQAWRALVFTNVVLAPK 124
            + WDER   V    AY+ G      + C+  V++T GWRW  +LFSY WL  L + Q  +VRLCCGKL+  ER  A    + + W + +F NVVLAP+
Sbjct:    1 MGWDERDHVVGACTAYLSGDPDTRPEHCLSKVIETFGWRWGFVLFSYTWLVFLWIVQGALVRLCCGKLKPVERARATAAVLGKVWSSFLFVNVVLAPE 98

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9277.17339.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9277.17339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LFG6_ECTSI	4.700e-17	42.86	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KCR0_9PHAE	9.360e-17	42.86	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..87
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..65
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 88..125

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9277	contig	S-dermatodea_contig9277:4168..7287 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9277.17339.1	mRNA_S-dermatodea_contig9277.17339.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9277 4168..7287 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9277.17339.1 ID=prot_S-dermatodea_contig9277.17339.1|Name=mRNA_S-dermatodea_contig9277.17339.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=126bp
HISHPGIIGPRTDPSCERRPTTDDHTEAIAWDERTDAVQMGWAYIVGREV
IDKCVLSVVDTIGWRWAGLLFSYVWLSSLVLGQSLVVRLCCGKLREAERG
AALKTAVVQAWRALVFTNVVLAPKV*