prot_S-dermatodea_contig9271.17329.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9271.17329.1
Unique Nameprot_S-dermatodea_contig9271.17329.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length89
Homology
BLAST of mRNA_S-dermatodea_contig9271.17329.1 vs. uniprot
Match: D7FQP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP3_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 9.650e-43
Identity = 73/88 (82.95%), Postives = 83/88 (94.32%), Query Frame = 0
Query:    1 MLQQWLRERCVPVVATVVTEDAELTCRKNDLSFEQLVSAFGRMEGLKVPFRSSSQQYSLDSFSCRFVRGSSMRPSPAKEGDPSLADIA 88
            MLQ+WLR+RCVPVVAT+VTEDA++ CRKN LSFEQLVSAF RM+GLKVPFRSSSQQ+SLDSFSCRF+RGSSMRP+PA EGDPSL+ IA
Sbjct:    1 MLQEWLRDRCVPVVATLVTEDADIACRKNGLSFEQLVSAFARMDGLKVPFRSSSQQFSLDSFSCRFMRGSSMRPAPATEGDPSLSHIA 88          
BLAST of mRNA_S-dermatodea_contig9271.17329.1 vs. uniprot
Match: A0A6H5JPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY7_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 6.800e-40
Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 0
Query:    1 MLQQWLRERCVPVVATVVTEDAELTCRKNDLSFEQLVSAFGRMEGLKVPFRSSSQQYSLDSFSCRFVRGSSMRPSPAKEGDPSLADIA 88
            MLQ+WLR+RCVPVVAT+VTEDA++ CRKN LSFEQLVSAF RM+GLKVPFRSSSQQ+SLDSFSCRF+RGSSMRP+PA EGD SL+ IA
Sbjct:    1 MLQEWLRDRCVPVVATLVTEDADIACRKNSLSFEQLVSAFARMDGLKVPFRSSSQQFSLDSFSCRFMRGSSMRPAPATEGDRSLSHIA 88          
BLAST of mRNA_S-dermatodea_contig9271.17329.1 vs. uniprot
Match: A0A0P1AJ27_PLAHL (Protein with predicted involvement in meiosis (GSG1) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ27_PLAHL)

HSP 1 Score: 54.3 bits (129), Expect = 1.640e-6
Identity = 26/72 (36.11%), Postives = 40/72 (55.56%), Query Frame = 0
Query:    2 LQQWLRERCVPVVATVVTEDAELTCRKNDLSFEQLVSAFGRMEGLKVPFRSSSQQYSLDSFSCRFVRGSSMR 73
            ++ W+++   PVV T  T +AE   RKN+LS + L++ F R+     P RS +    L SF+ RF+  S  R
Sbjct:    4 VESWVQDTFAPVVLTCSTSEAERIARKNNLSVDNLLNGFARLNDADTPLRSVTHPIQLASFNFRFIAASQFR 75          
BLAST of mRNA_S-dermatodea_contig9271.17329.1 vs. uniprot
Match: C5WY65_SORBI (Uncharacterized protein n=5 Tax=Andropogoneae TaxID=147429 RepID=C5WY65_SORBI)

HSP 1 Score: 50.8 bits (120), Expect = 2.720e-5
Identity = 31/87 (35.63%), Postives = 44/87 (50.57%), Query Frame = 0
Query:    2 LQQWLRERCVPVVATVVTEDAELTCRKNDLSFEQLVSAFGRMEGLKVPFRSSSQ-QYSLDSFSCRFVRGSSMRPSPAKEGDPSLADI 87
            L + L E   PVV  + T  AE TCRKN LSF  ++S F   + + VP R++S+  Y L  F  R V  S +R    +  D  +  +
Sbjct:    8 LGRLLLEEITPVVMVLSTPLAEATCRKNGLSFVDMLSPFSLFKKIDVPVRTASEVPYRLQMFKIRMVYASDVRKEDCEVADERIKPV 94          
BLAST of mRNA_S-dermatodea_contig9271.17329.1 vs. uniprot
Match: A0A5J9WBM3_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9WBM3_9POAL)

HSP 1 Score: 50.8 bits (120), Expect = 2.720e-5
Identity = 31/87 (35.63%), Postives = 44/87 (50.57%), Query Frame = 0
Query:    2 LQQWLRERCVPVVATVVTEDAELTCRKNDLSFEQLVSAFGRMEGLKVPFRSSSQQ-YSLDSFSCRFVRGSSMRPSPAKEGDPSLADI 87
            L + L E   PVV  + T  AE +CRKN LSF  ++S F   + + VP R++S Q Y L  F  R V  S +R    +  D  +  +
Sbjct:    8 LGRLLLEEITPVVMVLTTPLAEASCRKNGLSFVDMLSPFSLFKKIDVPVRTASDQPYRLQMFKIRMVYASDVRKQDYEVADERIKPV 94          
BLAST of mRNA_S-dermatodea_contig9271.17329.1 vs. uniprot
Match: A0A7J6VQV5_THATH (Tetratricopeptide repeat (TPR)-like superfamily protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6VQV5_THATH)

HSP 1 Score: 49.3 bits (116), Expect = 8.910e-5
Identity = 30/87 (34.48%), Postives = 42/87 (48.28%), Query Frame = 0
Query:    2 LQQWLRERCVPVVATVVTEDAELTCRKNDLSFEQLVSAFGRMEGLKVPFRSSSQQ-YSLDSFSCRFVRGSSMRPSPAKEGDPSLADI 87
            L + L E   PVV  + T   E +CRKN LSF Q++  F     + VP R++S Q Y L  F  R    S +R    +  +  L D+
Sbjct:    8 LGKMLLEEITPVVMVLRTPLVEESCRKNGLSFIQMIQPFSNFNNIDVPVRTASDQPYRLHQFKLRLHYASDIRQPNVEAAEEHLKDV 94          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9271.17329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQP3_ECTSI9.650e-4382.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPY7_9PHAE6.800e-4081.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0P1AJ27_PLAHL1.640e-636.11Protein with predicted involvement in meiosis (GSG... [more]
C5WY65_SORBI2.720e-535.63Uncharacterized protein n=5 Tax=Andropogoneae TaxI... [more]
A0A5J9WBM3_9POAL2.720e-535.63Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
A0A7J6VQV5_THATH8.910e-534.48Tetratricopeptide repeat (TPR)-like superfamily pr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024420TRAPP III complex, Trs85PANTHERPTHR12975TRANSPORT PROTEIN TRAPPcoord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9271contigS-dermatodea_contig9271:5057..7652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9271.17329.1mRNA_S-dermatodea_contig9271.17329.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9271 5003..7652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9271.17329.1 ID=prot_S-dermatodea_contig9271.17329.1|Name=mRNA_S-dermatodea_contig9271.17329.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=89bp
MLQQWLRERCVPVVATVVTEDAELTCRKNDLSFEQLVSAFGRMEGLKVPF
RSSSQQYSLDSFSCRFVRGSSMRPSPAKEGDPSLADIAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024420TRAPP_III_complex_Trs85