prot_S-dermatodea_contig9258.17311.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9258.17311.1
Unique Nameprot_S-dermatodea_contig9258.17311.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length169
Homology
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 4.750e-68
Identity = 129/168 (76.79%), Postives = 141/168 (83.93%), Query Frame = 0
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 168
            ATLVD D+SVRDLGAFTLTRPLI KTPGLFAQNFVE LFVLNNYSEHPCY AAAAGR DAGGGVTMDGIDLGGDDPAQ  KRMSVYSTMLEHMSDE KITVTAKLAQEVLSA ++GGLP+A  N+  S  +   + + G K+   G   +AR+KASSVVKDALT+MAS
Sbjct:  318 ATLVDSDASVRDLGAFTLTRPLITKTPGLFAQNFVETLFVLNNYSEHPCYAAAAAGRADAGGGVTMDGIDLGGDDPAQIRKRMSVYSTMLEHMSDEQKITVTAKLAQEVLSAVIDGGLPLA--NSTGSATSNSAAFANGNKN---GGGAKARKKASSVVKDALTIMAS 480          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.690e-66
Identity = 130/170 (76.47%), Postives = 143/170 (84.12%), Query Frame = 0
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIA--TNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 168
            ATLVD D+SVRDLGAFTLTRPLI KTPGLFAQNFVE LFVLNNYSEHPCY AAAAGR DAGGGVTMDGIDLGGD+PAQ  +R+SVYSTMLEHMSDE KITVTAKLAQEVLSA ++GGLP+A  T +AAS+  A     + G K+   G   EAR+KASSVVKDALT+MAS
Sbjct: 1162 ATLVDSDASVRDLGAFTLTRPLITKTPGLFAQNFVETLFVLNNYSEHPCYAAAAAGRADAGGGVTMDGIDLGGDNPAQIRRRISVYSTMLEHMSDEQKITVTAKLAQEVLSAVIDGGLPLANSTGSAASNSAA----FANGNKN---GGGAEARKKASSVVKDALTIMAS 1324          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: W7TNH2_9STRA (Condensin-2 complex subunit d3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNH2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.190e-25
Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 0
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVE-----GGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMASP 169
            A LVD D+ V ++  + +  PL+ K P LF  +FVEAL VLN  S+H  Y AA A   ++G  VTM+G+DL G  PA A KRM +Y  ML+HMSDE +I VTAKL Q++L AA +     GG+ I + + AS          R  +   + A     ++  ++++DALTV+  P
Sbjct:  834 AILVDEDTRVAEVADYMIFSPLLRKNPSLFVNHFVEALVVLNGCSDHDAYKAALAQGAESGTAVTMEGVDLEGSGPA-ANKRMRIYQAMLQHMSDEQRIQVTAKLTQDILGAATDEDGEAGGIKIQSYHRAS----------RFTQGLRREAALRKLKRDENLIRDALTVLQCP 996          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A4D9D835_9STRA (Cnd1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D835_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.680e-25
Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 0
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVE-----GGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMASP 169
            A LVD D+ V ++  + +  PL+ K P LF  +FVEAL VLN  S+H  Y AA A   ++G  VTM+G+DL G  PA A KRM +Y  ML+HMSDE +I VTAKL Q++L AA +     GG+ I + + AS          R  +   + A     ++  ++++DALTV+  P
Sbjct:  421 AILVDEDTRVAEVADYMIFAPLLRKNPSLFVNHFVEALVVLNGCSDHDAYKAALAQGAESGTAVTMEGVDLEGSGPA-ATKRMRIYQAMLQHMSDEQRIQVTAKLTQDILGAATDEDGEAGGIKIQSYHRAS----------RFTQGLRREAALRKLKRDENLIRDALTVLQCP 583          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A7S4T9Y0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T9Y0_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.470e-17
Identity = 67/166 (40.36%), Postives = 90/166 (54.22%), Query Frame = 0
Query:    4 VDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAA-GRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 168
            VD D SV  L   TL  PL+++   LF  NFVE+LFVLN  + HP Y AA A G   AG  V  +GI+L G       KR+++Y  ML HM+DE KI +TA+LA+ VL  A+E    ++     S  G   PS +R        ++ + R  A SV+ DA  V+ S
Sbjct:  173 VDDDESVSKLAEMTLCGPLLSRQRNLFFNNFVESLFVLNRCTAHPIYAAAEANGDNGAGLAVGFEGINLSGMYGRM--KRLNIYRMMLNHMTDEEKIGITARLAKVVLGGALESDGDLSMACRQSPPGMFSPSEARK-------SQQQRRECAISVLSDAFAVLTS 329          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A7S1ZLL9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLL9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.890e-17
Identity = 67/166 (40.36%), Postives = 90/166 (54.22%), Query Frame = 0
Query:    4 VDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAA-GRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 168
            VD D SV  L   TL  PL+++   LF  NFVE+LFVLN  + HP Y AA A G   AG  V  +GI+L G       KR+++Y  ML HM+DE KI +TA+LA+ VL  A+E    ++     S  G   PS +R        ++ + R  A SV+ DA  V+ S
Sbjct:  722 VDDDESVSKLAEMTLCGPLLSRQRNLFFNNFVESLFVLNRCTAHPIYAAAEANGDNGAGLAVGFEGINLSGMYGRM--KRLNIYRMMLNHMTDEEKIGITARLAKVVLGGALESDGDLSMACRQSPPGMFSPSEARK-------SQQQRRECAISVLSDAFAVLTS 878          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A1S3I599_LINUN (condensin-2 complex subunit D3 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I599_LINUN)

HSP 1 Score: 75.9 bits (185), Expect = 6.990e-13
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 0
Query:    3 LVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 120
            +VD D  ++    F L   L+ + PG+F Q+FVE +F  N Y  H  Y   +    +     TM    L G D A+  KRM +Y  MLEHMSDE +  +TAK+ QE+L   V+G +P+
Sbjct: 1046 VVDKDPDIKTFAEFCLVHLLLQRNPGMFNQHFVECIFHFNAYEGHNVYNKFSQSERER----TM--FSLKGKDNAE--KRMYMYRFMLEHMSDEHRFQLTAKICQEILGGLVDGVMPL 1155          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: UPI0018D75398 (LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D75398)

HSP 1 Score: 73.6 bits (179), Expect = 4.440e-12
Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0
Query:    2 TLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 120
            +LVD    +RD   F+L + L+ + P +  Q+FVE++F  N Y +H  Y   +    +         ++        AGKR ++Y  ML+HM+DE +  +TAKL QEVL+A V+G LP+
Sbjct: 1082 SLVDDVKEIRDFAEFSLVQLLLKRHPNMLHQHFVESVFHFNAYDKHSVYNQFSQTEREKQLFALKGALN--------AGKRSTIYRFMLQHMTDEHRFKLTAKLCQEVLAAIVDGVLPL 1192          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A8B7ZLI1_ACAPL (condensin-2 complex subunit D3-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZLI1_ACAPL)

HSP 1 Score: 73.2 bits (178), Expect = 6.040e-12
Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 0
Query:    2 TLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 120
            +LVD    +R+   F+L + L+   P +  Q+FVE++F  N Y +H  Y   +  +TD           L G     AGKR ++YS ML+HM+DE +  +TAKL QEVL+A V+G LP+
Sbjct: 1099 SLVDDVQEIREFAEFSLVQLLLKCHPNMLHQHFVESVFYFNAYYKHSVYNQFS--QTDR----EKQLFSLKG--APNAGKRRTIYSFMLQHMTDEHRFKLTAKLCQEVLAAIVDGVLPL 1209          
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: UPI00065B60BB (condensin-2 complex subunit D3 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B60BB)

HSP 1 Score: 70.5 bits (171), Expect = 5.200e-11
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 0
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 120
            ATL+D    VR+L  ++L   L+ K PG+F   F+E +F  N+Y  H  Y      +TD           L G      G+R+ +YS MLEHM+DE +  +T K+ +E+LS  V+  LP 
Sbjct: 1141 ATLLDDSEEVRNLAEYSLAHLLLPKHPGMFFHPFIECIFHFNSYHSHQVYNKFK--QTDR----EKQKFTLAGK--LNTGRRLKLYSFMLEHMTDEQRFKITDKINKEILSTTVDNILPF 1252          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKF8_9PHAE4.750e-6876.79Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FP86_ECTSI1.690e-6676.47Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
W7TNH2_9STRA3.190e-2540.80Condensin-2 complex subunit d3 n=1 Tax=Nannochloro... [more]
A0A4D9D835_9STRA5.680e-2540.80Cnd1 domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S4T9Y0_9STRA1.470e-1740.36Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZLL9_9STRA1.890e-1740.36Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1S3I599_LINUN6.990e-1338.14condensin-2 complex subunit D3 n=1 Tax=Lingula ung... [more]
UPI0018D753984.440e-1235.29LOW QUALITY PROTEIN: condensin-2 complex subunit D... [more]
A0A8B7ZLI1_ACAPL6.040e-1238.66condensin-2 complex subunit D3-like n=1 Tax=Acanth... [more]
UPI00065B60BB5.200e-1135.83condensin-2 complex subunit D3 n=1 Tax=Aplysia cal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 2..168
NoneNo IPR availablePANTHERPTHR14222:SF1CONDENSIN-2 COMPLEX SUBUNIT D3coord: 2..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9258contigS-dermatodea_contig9258:520..5717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9258.17311.1mRNA_S-dermatodea_contig9258.17311.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9258 520..5717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9258.17311.1 ID=prot_S-dermatodea_contig9258.17311.1|Name=mRNA_S-dermatodea_contig9258.17311.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=169bp
ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCY
MAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKIT
VTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFE
ARRKASSVVKDALTVMASP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3