mRNA_S-dermatodea_contig9258.17311.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9258.17311.1
Unique NamemRNA_S-dermatodea_contig9258.17311.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 4.750e-68
Identity = 129/168 (76.79%), Postives = 141/168 (83.93%), Query Frame = 1 
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 504
            ATLVD D+SVRDLGAFTLTRPLI KTPGLFAQNFVE LFVLNNYSEHPCY AAAAGR DAGGGVTMDGIDLGGDDPAQ  KRMSVYSTMLEHMSDE KITVTAKLAQEVLSA ++GGLP+A  N+  S  +   + + G K+   G   +AR+KASSVVKDALT+MAS
Sbjct:  318 ATLVDSDASVRDLGAFTLTRPLITKTPGLFAQNFVETLFVLNNYSEHPCYAAAAAGRADAGGGVTMDGIDLGGDDPAQIRKRMSVYSTMLEHMSDEQKITVTAKLAQEVLSAVIDGGLPLA--NSTGSATSNSAAFANGNKN---GGGAKARKKASSVVKDALTIMAS 480
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BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 1.690e-66
Identity = 130/170 (76.47%), Postives = 143/170 (84.12%), Query Frame = 1 
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIA--TNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 504
            ATLVD D+SVRDLGAFTLTRPLI KTPGLFAQNFVE LFVLNNYSEHPCY AAAAGR DAGGGVTMDGIDLGGD+PAQ  +R+SVYSTMLEHMSDE KITVTAKLAQEVLSA ++GGLP+A  T +AAS+  A     + G K+   G   EAR+KASSVVKDALT+MAS
Sbjct: 1162 ATLVDSDASVRDLGAFTLTRPLITKTPGLFAQNFVETLFVLNNYSEHPCYAAAAAGRADAGGGVTMDGIDLGGDNPAQIRRRISVYSTMLEHMSDEQKITVTAKLAQEVLSAVIDGGLPLANSTGSAASNSAA----FANGNKN---GGGAEARKKASSVVKDALTIMAS 1324
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: W7TNH2_9STRA (Condensin-2 complex subunit d3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNH2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.190e-25
Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 1 
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVE-----GGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMASP 507
            A LVD D+ V ++  + +  PL+ K P LF  +FVEAL VLN  S+H  Y AA A   ++G  VTM+G+DL G  PA A KRM +Y  ML+HMSDE +I VTAKL Q++L AA +     GG+ I + + AS          R  +   + A     ++  ++++DALTV+  P
Sbjct:  834 AILVDEDTRVAEVADYMIFSPLLRKNPSLFVNHFVEALVVLNGCSDHDAYKAALAQGAESGTAVTMEGVDLEGSGPA-ANKRMRIYQAMLQHMSDEQRIQVTAKLTQDILGAATDEDGEAGGIKIQSYHRAS----------RFTQGLRREAALRKLKRDENLIRDALTVLQCP 996
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A4D9D835_9STRA (Cnd1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D835_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.680e-25
Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 1 
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVE-----GGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMASP 507
            A LVD D+ V ++  + +  PL+ K P LF  +FVEAL VLN  S+H  Y AA A   ++G  VTM+G+DL G  PA A KRM +Y  ML+HMSDE +I VTAKL Q++L AA +     GG+ I + + AS          R  +   + A     ++  ++++DALTV+  P
Sbjct:  421 AILVDEDTRVAEVADYMIFAPLLRKNPSLFVNHFVEALVVLNGCSDHDAYKAALAQGAESGTAVTMEGVDLEGSGPA-ATKRMRIYQAMLQHMSDEQRIQVTAKLTQDILGAATDEDGEAGGIKIQSYHRAS----------RFTQGLRREAALRKLKRDENLIRDALTVLQCP 583
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A7S4T9Y0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T9Y0_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.470e-17
Identity = 67/166 (40.36%), Postives = 90/166 (54.22%), Query Frame = 1 
Query:   10 VDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAA-GRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 504
            VD D SV  L   TL  PL+++   LF  NFVE+LFVLN  + HP Y AA A G   AG  V  +GI+L G       KR+++Y  ML HM+DE KI +TA+LA+ VL  A+E    ++     S  G   PS +R        ++ + R  A SV+ DA  V+ S
Sbjct:  173 VDDDESVSKLAEMTLCGPLLSRQRNLFFNNFVESLFVLNRCTAHPIYAAAEANGDNGAGLAVGFEGINLSGMYGRM--KRLNIYRMMLNHMTDEEKIGITARLAKVVLGGALESDGDLSMACRQSPPGMFSPSEARK-------SQQQRRECAISVLSDAFAVLTS 329
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A7S1ZLL9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLL9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.890e-17
Identity = 67/166 (40.36%), Postives = 90/166 (54.22%), Query Frame = 1 
Query:   10 VDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAA-GRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFEARRKASSVVKDALTVMAS 504
            VD D SV  L   TL  PL+++   LF  NFVE+LFVLN  + HP Y AA A G   AG  V  +GI+L G       KR+++Y  ML HM+DE KI +TA+LA+ VL  A+E    ++     S  G   PS +R        ++ + R  A SV+ DA  V+ S
Sbjct:  722 VDDDESVSKLAEMTLCGPLLSRQRNLFFNNFVESLFVLNRCTAHPIYAAAEANGDNGAGLAVGFEGINLSGMYGRM--KRLNIYRMMLNHMTDEEKIGITARLAKVVLGGALESDGDLSMACRQSPPGMFSPSEARK-------SQQQRRECAISVLSDAFAVLTS 878
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A1S3I599_LINUN (condensin-2 complex subunit D3 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I599_LINUN)

HSP 1 Score: 75.9 bits (185), Expect = 6.990e-13
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 1 
Query:    7 LVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 360
            +VD D  ++    F L   L+ + PG+F Q+FVE +F  N Y  H  Y   +    +     TM    L G D A+  KRM +Y  MLEHMSDE +  +TAK+ QE+L   V+G +P+
Sbjct: 1046 VVDKDPDIKTFAEFCLVHLLLQRNPGMFNQHFVECIFHFNAYEGHNVYNKFSQSERER----TM--FSLKGKDNAE--KRMYMYRFMLEHMSDEHRFQLTAKICQEILGGLVDGVMPL 1155
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BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: UPI0018D75398 (LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D75398)

HSP 1 Score: 73.6 bits (179), Expect = 4.440e-12
Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 1 
Query:    4 TLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 360
            +LVD    +RD   F+L + L+ + P +  Q+FVE++F  N Y +H  Y   +    +         ++        AGKR ++Y  ML+HM+DE +  +TAKL QEVL+A V+G LP+
Sbjct: 1082 SLVDDVKEIRDFAEFSLVQLLLKRHPNMLHQHFVESVFHFNAYDKHSVYNQFSQTEREKQLFALKGALN--------AGKRSTIYRFMLQHMTDEHRFKLTAKLCQEVLAAIVDGVLPL 1192
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: A0A8B7ZLI1_ACAPL (condensin-2 complex subunit D3-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZLI1_ACAPL)

HSP 1 Score: 73.2 bits (178), Expect = 6.040e-12
Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 
Query:    4 TLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 360
            +LVD    +R+   F+L + L+   P +  Q+FVE++F  N Y +H  Y   +  +TD           L G     AGKR ++YS ML+HM+DE +  +TAKL QEVL+A V+G LP+
Sbjct: 1099 SLVDDVQEIREFAEFSLVQLLLKCHPNMLHQHFVESVFYFNAYYKHSVYNQFS--QTDR----EKQLFSLKG--APNAGKRRTIYSFMLQHMTDEHRFKLTAKLCQEVLAAIVDGVLPL 1209
[Close]
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Match: UPI00065B60BB (condensin-2 complex subunit D3 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B60BB)

HSP 1 Score: 70.5 bits (171), Expect = 5.200e-11
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 1 
Query:    1 ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCYMAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKITVTAKLAQEVLSAAVEGGLPI 360
            ATL+D    VR+L  ++L   L+ K PG+F   F+E +F  N+Y  H  Y      +TD           L G      G+R+ +YS MLEHM+DE +  +T K+ +E+LS  V+  LP 
Sbjct: 1141 ATLLDDSEEVRNLAEYSLAHLLLPKHPGMFFHPFIECIFHFNSYHSHQVYNKFK--QTDR----EKQKFTLAGK--LNTGRRLKLYSFMLEHMTDEQRFKITDKINKEILSTTVDNILPF 1252
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9258.17311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKF8_9PHAE4.750e-6876.79Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FP86_ECTSI1.690e-6676.47Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
W7TNH2_9STRA3.190e-2540.80Condensin-2 complex subunit d3 n=1 Tax=Nannochloro... [more]
A0A4D9D835_9STRA5.680e-2540.80Cnd1 domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S4T9Y0_9STRA1.470e-1740.36Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZLL9_9STRA1.890e-1740.36Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1S3I599_LINUN6.990e-1338.14condensin-2 complex subunit D3 n=1 Tax=Lingula ung... [more]
UPI0018D753984.440e-1235.29LOW QUALITY PROTEIN: condensin-2 complex subunit D... [more]
A0A8B7ZLI1_ACAPL6.040e-1238.66condensin-2 complex subunit D3-like n=1 Tax=Acanth... [more]
UPI00065B60BB5.200e-1135.83condensin-2 complex subunit D3 n=1 Tax=Aplysia cal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9258contigS-dermatodea_contig9258:520..5717 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.8
Seed ortholog evalue5.9e-59
Seed eggNOG ortholog2880.D7FP86
KEGG koko:K11491
EggNOG free text desc.meiotic chromosome condensation
EggNOG OGsKOG0413@1,KOG0413@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size509
Cds size507
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9258.17311.1prot_S-dermatodea_contig9258.17311.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9258 520..5717 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925396.6938505-CDS-S-dermatodea_contig9258:519..7021622925396.6938505-CDS-S-dermatodea_contig9258:519..702Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 520..702 -
1694079905.6293972-CDS-S-dermatodea_contig9258:519..7021694079905.6293972-CDS-S-dermatodea_contig9258:519..702Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 520..702 -
1622925396.707638-CDS-S-dermatodea_contig9258:2158..22481622925396.707638-CDS-S-dermatodea_contig9258:2158..2248Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 2159..2248 -
1694079905.6429791-CDS-S-dermatodea_contig9258:2158..22481694079905.6429791-CDS-S-dermatodea_contig9258:2158..2248Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 2159..2248 -
1622925396.7182918-CDS-S-dermatodea_contig9258:3659..38181622925396.7182918-CDS-S-dermatodea_contig9258:3659..3818Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 3660..3818 -
1694079905.65402-CDS-S-dermatodea_contig9258:3659..38181694079905.65402-CDS-S-dermatodea_contig9258:3659..3818Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 3660..3818 -
1622925396.729442-CDS-S-dermatodea_contig9258:5642..57171622925396.729442-CDS-S-dermatodea_contig9258:5642..5717Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 5643..5717 -
1694079905.664517-CDS-S-dermatodea_contig9258:5642..57171694079905.664517-CDS-S-dermatodea_contig9258:5642..5717Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9258 5643..5717 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9258.17311.1

>prot_S-dermatodea_contig9258.17311.1 ID=prot_S-dermatodea_contig9258.17311.1|Name=mRNA_S-dermatodea_contig9258.17311.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=169bp
ATLVDCDSSVRDLGAFTLTRPLINKTPGLFAQNFVEALFVLNNYSEHPCY
MAAAAGRTDAGGGVTMDGIDLGGDDPAQAGKRMSVYSTMLEHMSDEGKIT
VTAKLAQEVLSAAVEGGLPIATNNAASSDGAGEPSSSRGRKSYGKGAEFE
ARRKASSVVKDALTVMASP
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mRNA from alignment at S-dermatodea_contig9258:520..5717-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9258.17311.1 ID=mRNA_S-dermatodea_contig9258.17311.1|Name=mRNA_S-dermatodea_contig9258.17311.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5198bp|location=Sequence derived from alignment at S-dermatodea_contig9258:520..5717- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCTACCCTTGTCGATTGCGATTCCTCGGTCCGGGATCTCGGCGCCTTCAC
GCTGACTCGCCCCCTCATTAACAAGGTCTGCGCGGCGTTATGGTTGCCGA
GGGGAGCCATTGGCTTTTATTTGGTTGGGTGGTTTTGTACTTGTATGGCG
GCGGTGCGTCTCTTGTGCGTGTTGTTGTGGGCGTTGGTTTTACGTGTGTG
TCTGTGTGTGCGTACGCGCCTTGTTTGTGGTTGGAGGTATTTGTTGGGGT
ATTTGTTGGGGGAGCTGTGTTTCTGGGCTACGCGAGTTTTCGAAGGAGGG
AAGACAATGTTGGAGTAGGTGGTATCAATAGTGAATCGAGGGAGAGAGAC
GCCGAGCTCCAGGCATTGCCGCCTGCGGCACGGGAAGCACCGACTGGCTA
CAATAATTTTCGCGCTCAAAATTGCGCGCCGTTGGAAAGGATTCGGCAAG
GAGAGAGTAAAAACGCAGCTGCGAGGCAGCTCGCCTGGTGGTACTTCGCG
AACATGGCCGTGCGGCCTCCGATAAATCCTAATCGTGGTGGTCGGCCTTG
ACTTGTATGAGCTGGTGTCAATATTTTCCGCCGTGGTGGCAGGATCGATG
CAAGCTCCCGATAGGGGATAATTAAACGGAAACACAGTCGTGAGTTTTAG
TTCGTTTCTATTTAATCTTTTGTTAATCACTCTATTTTCGAGCATCAAGT
AAAAAGCCACCCTACTTGTATAAAAATGGCCATCTGGACGTTTTCCGGTA
GCAGGCAAATGTTCCTATTCATTTTTGTTTTCGGCTGTCGGAATCAGCGA
ATTCCCTCAGCTCTTACCTCTCTTGCCGATTTGCTGAACCGTTTCGAAAC
CGAGTTCGTTTTTCGGGTCCGCCCGCCTCCATCGCATTTCGCATCGAACA
GGTACAGTACTTGTACCCGAACGGTGGCTTGCTGACTCCTCGCCCCCCCC
GTACATAGTATTGATATAACGTAGCGGTATTAATTATGAGTAGCCCTTAC
TAGTTAAAGGAACAATCCACGTTTTTTAATAGCGATTTAGAGTTGATTCT
TCCGGACAATAATAACTGCGATTTAGAGCTGAGGCGGTGAAACATGTGCG
AAGCTAAGAGTAGTAGGAATTTTTACCTCATGGACGTAGCCTATTAATAT
GAATACTAGTATTGTAGTATTGTACGTAGTAATTCCTACTACTCTTATAC
TATTACAGTATAGGATTGTACAACTCTGTTTCCGAGAGTTAGTTTATGTC
AATTCCTTCTTTGTATGTACTATAGACGAGTAGGTAACCCGTAGGCTTTT
TTCTCGATCTCCCGATTTTTTCTCATCTGACCACGAGATAGCGGGATCGG
CAACTATTGGTGGGCCGGTCGGCTGTATGTGTGATGATAATAATAACAAT
AAAAGTAATATTAATAACAACACTAATAGTAATAACACTTGTAGTATTAG
TAGTTTGATTATAGGCGATCGGCTTAATCCGACCCGACTTGTGGTCAGAC
ACGCAAATAGTCAAGGAGAAAAATACCTAGTCAGAACTCTACTTGTGCTA
TAGTACATAGTATTAATAGTACATATTATTTATTGTATTAATAATAAATA
GTGGCGGTGTGAAGTGACAACCCTGCCGCGAGTACATAGGCACTGTACCA
TGTGCGTGCAGCCTCACCCCCTCACCGCAATGTGGCCCCAGTGGCCATAT
TGAATATTCCATATGCAATATTCCAAGCAAAACGGACTTAGCGCCGAAGG
GGTAAACAAACACAATATGATGTATAGCTAAAGCGGGAAACATAGTCTTC
TTTTGTCAGAAGCAGAATATTAATACTATTAATACTACTCTATAACCGCC
TGCCTTGCACTCATGCTTGCACCTTCACGCCCTCCCCACTCCCCCTCAGA
CGCCGGGTCTGTTCGCGCAAAACTTTGTGGAAGCGCTCTTCGTGTTGAAT
AACTACTCTGAGCACCCGTGCTACATGGCGGCGGCGGCCGGGCGCACCGA
TGCTGGAGGGGGAGTCACCATGGACGGCATTGATCTGGGGGGGGATGACC
CCGCACAGGTACGTAAATGTATAGGCACGTGAGACAGATATATACGATAT
GTATATAGGTGGATAGGCTGCGGTGGACTGTTGCGGGCGAGCGTTGGGTG
GTGTGCAACATGTAGGACGACTTGTGGGTGGTTTTGCGGTGAGGCATTTT
TGTTTGGGGGGGGTGTACTCATTGATCGTGCATGCCGTAGTCGTTAGACC
ATAGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTTTCGC
CGGACCAGGCTTGGGGGGGAGGGGGTGTACTTACTTATATTAAACGCATG
TCGATCCATACGGATATAGACCACGAGTCCCAACAATGTCGGGACGGAGC
GATATGCCGGGTTTTCGCCGGCCAGGCTGCGTTTCACAAGGGTGATACCA
GCTGCCTGCCATCACCCCTTGTGTTTGCGACGCCAAACGGTATGCCATGG
GTTGATTGGGCATACCGGGTAACCAAATGTTGCACATTCAGTAGGCGTGA
CTATACTCCAAGTTCCACAAAGCAAAGGGATTTTGATCACCGTGCGAACG
CAGAAGCACCGTACCCACACAATATACACGACGGTATATGTGTGATACAC
TCGGACTATAATATGCTCATGAATATCCCTGGCGGAGTACTACTCATAAG
TNNNNNNNNNNAACAATCCAATGTTCAGCAGGTGTCCTATAGGAGGTGAT
GCGATTCGCCCCTTTGGGGAGAGCCAAGACTCTTCGACCGAGGTCGGGGG
GTGAATGCGTGATGGCCTTGGTTGCTGCTGATCTGTGATGTTTTGCTTTC
GGCAGGATTAGTTTGGTGGCGTTCTCAGGTTAACGTTTCGTGGACATATA
TGTGGAGAAACAGTCGTAGTTTAGTGACTGGAACAGCAGTGGGTTGTCGG
ATTGTCTACTCTTTTCCTCTCGGTGCCCCATGCCGTCGATTTTTGTGTAG
CCTGATTTTTCTTACAAATTTCCCCTCCTCCGACAATTGTGCTCGTACAG
AACGTGCAACGCACCCACAGGAATACTTGTAGCTGTAGTTGTAAAGTTCA
TCTACTACTAACCCTTTTGGTAATAGGGCTATCCGAAACGTTCAAAATCT
CTCTAGCTGCCAGTTGACAGCTACATCCCCGCTTCCCCTTGAGCTCCGTT
CTCTCTCATTCCTGCGTCATAACCCATGCGGTTCCCCAGAGCCCCGCTTC
AAACATGCCTCAGTACGTGCTAACCGGCGGTCCAAACACGGGGTTACTAC
CAAAAGGGTTAATACTCATTTTTTTAGTTTTAATTTCGTGCGACGTATCA
TTGAACCGGTCCCGGCTTGACACACGAGATGCAAAAGTGCAAACGGTGTG
TACTGACGACACCTTCAACACCCCAACACCCTCGTGCCCCCTCCCTTTCC
GCATCTCCGCACGTTTAAGGCCGGCAAGCGAATGTCCGTCTACTCGACGA
TGCTGGAACACATGTCAGACGAGGGAAAAATTACCGTTACGGCCAAGCTC
GCGCAAGAGGTGGGTTCGTCCACGGTTCGGTCCCCGCCCGGCGGCTAAAC
GTGGGAAAAAAATCCCGTTACGCCAAGCCCCGGCGAGGGTGTGTTTCTGC
CCATGTTTGGCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGCGGGGGTT
GGTGGAGGGTGTACCCTACGGCTACTTTTCGTTTGAAAGTTTTTCGTGTC
CTTACATGGTGGGGGGAGGGAGGGGGAGGGGCGGGTATTCGCAATGGGGC
ATGAAGACAGCCGCGCGCCCCGTAGTTGAACTGGTTCGACGACGTCCCAG
TAAGGTAAGGCGGAGGACTAAAATAGGGTTCGAACCCCGCCAGAGTCGGT
GTTTTTTTTTTACTACCTCCGCCGCGGGAAGCGCAAGAGCGTGAGTAAGC
AATATTCGAGAAATCGGCGAGCTGTGGGAATGGCATGCTTTGCGAAGCCA
CCCAAGATCCCCCTCCCTTGCTCCGTCCTCTCGAGGACGCGTGGTCAATG
GTCTCACAGCTAAGGCATGCAGAACATGAGTACGCCCCCCCACCCCCCCC
CCCCTCCCACCCACCCATACTAAAAAGTCACATCAAGGAGACACAGCTTA
ATCGCCNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCCCAG
AAGGGGGGAAAGACGAACCACGGGCCCCCCCCCCCCCCCCCCCCCCCCTC
ATCACTACGTAATACGTCGACGGTGCTAAACATGGAACGAGTGAAATATG
TCCGTCCCATGAAAACCCCCATAAAATGCGCACTGATATTTCGATACAAA
CGTGGGTCGTGGGTGGGATTCAGGATTCGTTTTTATTTTTATTTTGCAGG
GGTGGCCCAGTCCACACAAACGTATTGTAAATAGCGTCTGTGGAGAATTG
TGTTACCTTTCAGCCAGCCAGGTCTCTTGATCGCGCATCGTTAACTCCAC
GATGCAACATTATGTATCAATATACGAAGCGACCGTTGACTTAAACCCTG
CATAAGGCTGAAATGGGAAACGTTGATTGTTGTGATAAGTCTGTTTTTGA
GGCATGGGGCACTCTCATGAAGGCAGACAGTACAAATGCAATACTGGGGG
TACTGGGGGATAACAAGTGCCCCGAACAGGCGAGAACTGAAGCAGATACT
GCTTGTAAAACAGGAAAAACCTTTTTTGAGCCACGGAAGGGACGATTCGT
CATCGGCGATCGATGGATCGATGGATCGATCGATCCCATGCGAAATATGC
TATGCTATGTACTCTCTAGGACGCGTTAGTCATCGGCGATCGATGCTGTG
GGAACAATGCTCCATCCTCCCGAGGACGCGTGGTCAATGGCGTAACAGCT
AAGGCATGCAAAACTTGAGTAACCCCCCCCCCCCCCACCCACCCACCCCA
CCTCCCCTCCACCCCTTGCCGCGCGTGCATCGTACCCCATGTATCGGCCG
GACAACCCTACCCAGGTGCTATCCGCAGCTGTGGAAGGAGGCTTGCCAAT
CGCAACCAATAATGCCGCGTCTTCTGATGGTGCTGGGGAACCCAGCAGCA
GCCGAGGTAGGAAGAGCTACGGCAAGGGCGCGGAGTTCGAGGCTCGCAGG
AAGGCGTCATCGGTTGTGAAGGATGCCCTCACGGTCATGGCGTCGCCG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9258:520..5717-

>mRNA_S-dermatodea_contig9258.17311.1 ID=mRNA_S-dermatodea_contig9258.17311.1|Name=mRNA_S-dermatodea_contig9258.17311.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at S-dermatodea_contig9258:520..5717- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCTACCCTTGTCGATTGCGATTCCTCGGTCCGGGATCTCGGCGCCTTCAC
GCTGACTCGCCCCCTCATTAACAAGGCTACCCTTGTCGATTGCGATTCCT
CGGTCCGGGATCTCGGCGCCTTCACGCTGACTCGCCCCCTCATTAACAAG
ACGCCGGGTCTGTTCGCGCAAAACTTTGTGGAAGCGCTCTTCGTGTTGAA
TAACTACTCTGAGCACCCGTGCTACATGGCGGCGGCGGCCGGGCGCACCG
ATGCTGGAGGGGGAGTCACCATGGACGGCATTGATCTGGGGGGGGATGAC
CCCGCACAGACGCCGGGTCTGTTCGCGCAAAACTTTGTGGAAGCGCTCTT
CGTGTTGAATAACTACTCTGAGCACCCGTGCTACATGGCGGCGGCGGCCG
GGCGCACCGATGCTGGAGGGGGAGTCACCATGGACGGCATTGATCTGGGG
GGGGATGACCCCGCACAGGCCGGCAAGCGAATGTCCGTCTACTCGACGAT
GCTGGAACACATGTCAGACGAGGGAAAAATTACCGTTACGGCCAAGCTCG
CGCAAGAGGCCGGCAAGCGAATGTCCGTCTACTCGACGATGCTGGAACAC
ATGTCAGACGAGGGAAAAATTACCGTTACGGCCAAGCTCGCGCAAGAGGT
GCTATCCGCAGCTGTGGAAGGAGGCTTGCCAATCGCAACCAATAATGCCG
CGTCTTCTGATGGTGCTGGGGAACCCAGCAGCAGCCGAGGTAGGAAGAGC
TACGGCAAGGGCGCGGAGTTCGAGGCTCGCAGGAAGGCGTCATCGGTTGT
GAAGGATGCCCTCACGGTCATGGCGTCGCCGGTGCTATCCGCAGCTGTGG
AAGGAGGCTTGCCAATCGCAACCAATAATGCCGCGTCTTCTGATGGTGCT
GGGGAACCCAGCAGCAGCCGAGGTAGGAAGAGCTACGGCAAGGGCGCGGA
GTTCGAGGCTCGCAGGAAGGCGTCATCGGTTGTGAAGGATGCCCTCACGG
TCATGGCGTCGCCG
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