prot_S-dermatodea_contig9245.17303.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9245.17303.1
Unique Nameprot_S-dermatodea_contig9245.17303.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length172
Homology
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: D7FQU6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU6_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 1.570e-92
Identity = 145/171 (84.80%), Postives = 162/171 (94.74%), Query Frame = 0
Query:    1 MEQLDFCFFSLDRLLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHLFGLRRDGTGRRVAGATFEEATHGSLCETIRAGQMVEHALLLHVSEETLEQHRHDYHLQKISSPGSD 171
            +E+LD CFFSL+RLLRRHCPSLRQHLSDEGVEL+MFTSRWFVTLFT TDVFGRGTSRKILDMF+VEGWPLLFK+SLGVLLEMRPLLEP DMEGIL++TKFPRAHLFGLRRDG+GR +AGA+FEEAT GSLCE+IRAGQMVEHALLLH+S ETLEQH+ +Y LQK ++PGSD
Sbjct: 1281 LERLDLCFFSLERLLRRHCPSLRQHLSDEGVELSMFTSRWFVTLFTSTDVFGRGTSRKILDMFLVEGWPLLFKMSLGVLLEMRPLLEPADMEGILKVTKFPRAHLFGLRRDGSGRHIAGASFEEATQGSLCESIRAGQMVEHALLLHISGETLEQHQREYRLQKHAAPGSD 1451          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: A0A225WJL6_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJL6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.210e-15
Identity = 36/92 (39.13%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   14 LLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHL 105
            L   H P L +H   EGV +  F +RWF+T F+  +        ++LD+F+++GW ++F +SL +L E++  L   DMEGILR+ +FPR+H+
Sbjct:  742 LFSTHMPELYEHFQAEGVHVATFCTRWFLTFFSSFETLAPTLVTRLLDIFIIDGWRIMFSVSLVILDELQQQLMQCDMEGILRVLQFPRSHM 833          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: A0A4D9CZ65_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ65_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.400e-15
Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 0
Query:    1 MEQLDFCFFSLDRLLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHLFGL---RRDG 112
            M +L  CF   DRLLR   P L  H  + GV + MF+S+WFVTL+   D        ++ D+F+VEGW ++F +++ ++  +   L   D+E ILR+ + PRA L      R DG
Sbjct: 1025 MPRLKACFAVFDRLLRIRTPGLHAHFVETGVHVAMFSSKWFVTLYANLDTLPPQAVLRVWDVFLVEGWSVIFGVAVSLIEMLEGQLRDLDLEDILRLVQDPRAALLACSTTRADG 1139          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: D0MQN4_PHYIT (Rab-GAP TBC domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MQN4_PHYIT)

HSP 1 Score: 80.5 bits (197), Expect = 1.780e-14
Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 0
Query:   12 DRLLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHL 105
            + L   H P L  H   EGV +  F +RWF+T F+  +        ++LD+F+++GW ++F +SL +L E++  L   DMEGILR+ +FPR ++
Sbjct:  720 EELFSTHMPELHMHFQKEGVHVATFCTRWFLTFFSSFETLAPTLVTRLLDIFIIDGWRIMFSVSLVILDELQQQLLKADMEGILRVLQFPRCYM 813          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: A0A484DSH9_BRELC (Rab-GAP TBC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSH9_BRELC)

HSP 1 Score: 80.1 bits (196), Expect = 2.440e-14
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   14 LLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHL 105
            L   H P L  HL  EGV + MF +RWF+T F+  +        ++L++F+++GW ++F +SL +L E++  L   DMEGILR+ K PR H+
Sbjct:  756 LFSTHMPELFAHLESEGVHVAMFCTRWFLTFFSAFETLVPTLVTRVLEIFIIDGWRIIFSVSLVILNELQHELLRCDMEGILRVLKSPRCHM 847          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: A0A0W8DLX5_PHYNI (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DLX5_PHYNI)

HSP 1 Score: 79.7 bits (195), Expect = 2.990e-14
Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   14 LLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHL 105
            L   H P L  H  +EGV +  F +RWF+T F+  +        ++LD+F+++GW ++F +SL +L E++  L  +DMEGILR+ +FPR ++
Sbjct:  414 LFSTHMPELYTHFQNEGVHVATFCTRWFLTFFSSFETLAPTLVTRLLDIFIIDGWRIMFSVSLVILDELQQQLLKSDMEGILRVLQFPRCYM 505          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: V9F9L7_PHYPR (Rab-GAP TBC domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=V9F9L7_PHYPR)

HSP 1 Score: 79.7 bits (195), Expect = 3.320e-14
Identity = 35/92 (38.04%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   14 LLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHL 105
            L   H P L  H  +EGV +  F +RWF+T F+  +        ++LD+F+++GW ++F +SL +L E++  L  +DMEGILR+ +FPR ++
Sbjct:  755 LFSTHMPELYTHFQNEGVHVATFCTRWFLTFFSSFETLAPTLVTRLLDIFIIDGWRIMFSVSLVILDELQQQLLKSDMEGILRVLQFPRCYM 846          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: A0A2D4BZI8_PYTIN (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZI8_PYTIN)

HSP 1 Score: 76.6 bits (187), Expect = 5.240e-14
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 0
Query:    8 FFSLDRLLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHLFGL 108
            F   +    R  P L  H   EGV +  F +RWF+T F+  + FG     ++LD+F+++GW ++F ++L VL E+   L  +DME ILR+ + PRA L  L
Sbjct:   90 FVRFEAFFSRQKPELFAHFQREGVPVAAFAARWFLTFFSTFETFGPTLVIRLLDLFVIDGWRVIFSMALVVLDELEHELLASDMEAILRLLQLPRARLVEL 190          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: A0A6A3L008_9STRA (Rab-GAP TBC domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L008_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.150e-14
Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   14 LLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHL 105
            L   H P L  H   EGV +  F +RWF+T F+  +        ++LDMF+++GW ++F +SL +L E++  L   DMEGILR+ +FPR+++
Sbjct:  767 LFSTHMPELYAHFQAEGVHVATFCTRWFLTFFSSFETLAPTLVIRLLDMFIIDGWRVMFSVSLVILDELQEQLMKCDMEGILRVLQFPRSYM 858          
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Match: A0A3M6V6V8_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6V8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.190e-14
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   14 LLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDVFGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKFPRAHL 105
            LL  H P L  H   EGV +  F +RWF+T F+  +        ++LD+F+++GW ++F  SL +L E++  L   DMEGILRI +FPR+++
Sbjct:  816 LLSIHMPKLFSHFQAEGVHVAAFCTRWFLTFFSSFEALAPTLVTRLLDIFIIDGWRIMFSFSLVILDELQKQLLKCDMEGILRILQFPRSYM 907          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9245.17303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQU6_ECTSI1.570e-9284.80Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A0A225WJL6_9STRA5.210e-1539.13Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
A0A4D9CZ65_9STRA7.400e-1537.39Rab-GAP TBC domain-containing protein n=2 Tax=Mono... [more]
D0MQN4_PHYIT1.780e-1437.23Rab-GAP TBC domain-containing protein n=2 Tax=Phyt... [more]
A0A484DSH9_BRELC2.440e-1440.22Rab-GAP TBC domain-containing protein n=1 Tax=Brem... [more]
A0A0W8DLX5_PHYNI2.990e-1438.04Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
V9F9L7_PHYPR3.320e-1438.04Rab-GAP TBC domain-containing protein n=16 Tax=Phy... [more]
A0A2D4BZI8_PYTIN5.240e-1437.62Rab-GAP TBC domain-containing protein n=1 Tax=Pyth... [more]
A0A6A3L008_9STRA6.150e-1439.13Rab-GAP TBC domain-containing protein n=5 Tax=Phyt... [more]
A0A3M6V6V8_9STRA6.190e-1440.22Rab-GAP TBC domain-containing protein n=2 Tax=Pero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 2..80
e-value: 4.7E-13
score: 49.3
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..67
score: 11.464
NoneNo IPR availableGENE3D1.10.472.80coord: 1..162
e-value: 7.7E-25
score: 89.3
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 1..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9245contigS-dermatodea_contig9245:5694..8231 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9245.17303.1mRNA_S-dermatodea_contig9245.17303.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9245 4882..8252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9245.17303.1 ID=prot_S-dermatodea_contig9245.17303.1|Name=mRNA_S-dermatodea_contig9245.17303.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=172bp
MEQLDFCFFSLDRLLRRHCPSLRQHLSDEGVELNMFTSRWFVTLFTCTDV
FGRGTSRKILDMFMVEGWPLLFKLSLGVLLEMRPLLEPTDMEGILRITKF
PRAHLFGLRRDGTGRRVAGATFEEATHGSLCETIRAGQMVEHALLLHVSE
ETLEQHRHDYHLQKISSPGSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf