prot_S-dermatodea_contig9224.17289.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9224.17289.1
Unique Nameprot_S-dermatodea_contig9224.17289.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length274
Homology
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BLAST of mRNA_S-dermatodea_contig9224.17289.1 vs. uniprot
Match: D7FSN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN1_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 2.630e-26
Identity = 61/122 (50.00%), Postives = 75/122 (61.48%), Query Frame = 0 
Query:    1 MAAQYTDDACEEPTGVEHVVSGSAVSAPGFSTEACFPGE----VGTFGLPYLSECLSDGKVLMNLFGIGDDACEGELYAEILTTFTSDWPREPDWRIVADRVIRETTSHSCFPIAGLYYRAM 118
            +AAQY+DD C  PTGV+HVVSG  VSAPGFSTE CFP E    V    LP+LSECLSDG  ++ LFG+ D  C GE+  E  T FT      PD R +AD       + SC+ +   +YRA+
Sbjct:  177 VAAQYSDDKCTVPTGVDHVVSGYDVSAPGFSTEGCFPPESDPEVPAPSLPFLSECLSDGSAVIQLFGLSDLTCSGEVQLEYHTNFTPHMSSGPDMRRMAD------AADSCYLVGDYHYRAV 292
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9224.17289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSN1_ECTSI2.630e-2650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 250..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9224contigS-dermatodea_contig9224:4157..5385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9224.17289.1mRNA_S-dermatodea_contig9224.17289.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9224 2198..5421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9224.17289.1 ID=prot_S-dermatodea_contig9224.17289.1|Name=mRNA_S-dermatodea_contig9224.17289.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=274bp
MAAQYTDDACEEPTGVEHVVSGSAVSAPGFSTEACFPGEVGTFGLPYLSE
CLSDGKVLMNLFGIGDDACEGELYAEILTTFTSDWPREPDWRIVADRVIR
ETTSHSCFPIAGLYYRAMSCTMDVVTIGEATAPTTAPATPSPSSSSTPAL
EPATTVAPSTGVLESQVPVTGAPVSLSLESTPAPAFAREVAPVSGSPATT
PAATTTAPSGAEIDTPSPSGGNSQETAATTTPATGVEAGVNAAIRSVGSG
GYIEVVTLSLCGLAAFFWVTAGF*
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