prot_S-dermatodea_contig92199.17283.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig92199.17283.1
Unique Nameprot_S-dermatodea_contig92199.17283.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length81
Homology
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0FDI8_9PHAE (SecY-independent transporter protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDI8_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 9.090e-16
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKN 76
            N SYP+ I ++L L+Y +  ILT +R IVY ITF    ILTPPDII+Q  + + II+FYEIQI+IW+I+K Y N
Sbjct:  162 NFSYPLIITLNLILSYVQIIILTKHRKIVYFITFTTATILTPPDIISQTFVGVFIIMFYEIQIIIWMIYKKYNN 235          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0K057_9PHAE (SecY-independent transporter protein n=1 Tax=Saccharina subsessilis TaxID=2173147 RepID=A0A8F0K057_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.640e-14
Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
             LS+P  I++++   YT  +    YRGI YI  F I A +TPPD+++Q+++ LP+I+FYEIQ+ IW +H+ YK  LL
Sbjct:  162 TLSFPCLIVLNIVQIYTNRQTWVKYRGIAYIAAFFIAAFITPPDVLSQVLIGLPLIMFYEIQLKIWSLHEEYKKQLL 238          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A089N2X8_PETFA (SecY-independent protein translocase component tatC n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N2X8_PETFA)

HSP 1 Score: 73.2 bits (178), Expect = 8.730e-14
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    4 LSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
            LS P  I ++L   YTK K+   YRGI YI  F + A +TPPDI++Q+ +  PIILFYE+QI+ W ++K Y+  LL
Sbjct:  163 LSLPSIITLNLLQRYTKKKLWVKYRGIAYIAAFSLAAFITPPDILSQVFIGFPIILFYELQIIFWALYKQYQEQLL 238          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0FC39_9PHAE (SecY-independent transporter protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FC39_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.250e-13
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
            +LS P+ + +S+   YT  K+   YRGI Y+I F I+A LTPPDI++QII+ LPIILF+EIQI  W ++K Y+  LL
Sbjct:  162 SLSLPLILGLSIVQMYTNKKMWIKYRGISYMIAFSISAFLTPPDILSQIIVGLPIILFFEIQIAGWALYKEYQTQLL 238          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A0U1XGV1_9PHAE (SecY-independent protein translocase component tatC n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XGV1_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 3.000e-13
Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
            + S+P  I ++L   YTK  +   YRGI YII F I A LTPPDI++Q I+ALP+I F+E+QI+ W +++ Y+  LL
Sbjct:  162 SFSFPCLITLNLIQKYTKKILWVKYRGIAYIIVFSIAACLTPPDILSQTIVALPLIFFFELQIIFWALYQEYQKQLL 238          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: Q2TUK8_FUCVE (SecY-independent transporter protein n=3 Tax=Fucus TaxID=3011 RepID=Q2TUK8_FUCVE)

HSP 1 Score: 71.2 bits (173), Expect = 4.850e-13
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
            N S+PI I++++    T TKI   YRG++YI++F   A +TPPDII+QI++ +P+IL YE+QI+  I+   YK  LL
Sbjct:  162 NFSFPILIILNIIQNNTSTKIWVKYRGLIYILSFTFAAFITPPDIISQILVGIPLILIYEMQIIYKILKNKYKKYLL 238          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: E6ZEQ8_ECTSI (Sec-independent transporter protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ8_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 6.450e-13
Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    5 SYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
            S+P  + ++L   YT  ++   +RGI YII F I A +TPPDII+QI++  P+I F+EIQI++W  +K YK  LL
Sbjct:  164 SFPCLLTLNLFQKYTNKQLWVKHRGIAYIIAFFIAAFITPPDIISQILVGAPLIFFFEIQIILWAFYKEYKKQLL 238          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A4D6E696_9PHAE (SecY-independent transporter protein n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E696_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 8.590e-13
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKN 76
             + +P  I++++   YT   IL  YRGI YI  F I A +TPPD+++Q ++ LP+I+FYEIQ+  W +H+ YK 
Sbjct:  162 TIGFPCLIILNILQIYTSRHILVKYRGIAYITAFSIAAFITPPDVLSQTLIGLPLIIFYEIQLKFWHLHEEYKK 235          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0K1B9_9PHAE (SecY-independent transporter protein n=7 Tax=Alariaceae TaxID=2887 RepID=A0A8F0K1B9_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 9.000e-13
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
             LS+P  I +++   YT   I   YRGI YI  F I A +TPPD+++Q ++ LP+I+FYEIQ+ IW +++ YK  LL
Sbjct:  162 TLSFPCLIALNIVQIYTNRHIWVKYRGIAYITAFFIAAFITPPDVLSQTLIGLPLIIFYEIQLKIWSLYEGYKKQLL 238          
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0JZS6_9PHAE (SecY-independent transporter protein n=1 Tax=Cymathaere triplicata TaxID=309354 RepID=A0A8F0JZS6_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 9.000e-13
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    3 NLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 79
             LS+P  IL+++   YT  +    YRGI YI  F I A +TPPD+++Q ++ LP+I+FYEIQI  W +++ YK  LL
Sbjct:  162 TLSFPCLILLNIIQMYTNRETWIKYRGIAYITAFFIAAFITPPDVLSQTLIGLPLIIFYEIQIKFWSLYEEYKKQLL 238          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FDI8_9PHAE9.090e-1655.41SecY-independent transporter protein n=1 Tax=Proto... [more]
A0A8F0K057_9PHAE2.640e-1445.45SecY-independent transporter protein n=1 Tax=Sacch... [more]
A0A089N2X8_PETFA8.730e-1448.68SecY-independent protein translocase component tat... [more]
A0A8F0FC39_9PHAE1.250e-1351.95SecY-independent transporter protein n=1 Tax=Desma... [more]
A0A0U1XGV1_9PHAE3.000e-1348.05SecY-independent protein translocase component tat... [more]
Q2TUK8_FUCVE4.850e-1346.75SecY-independent transporter protein n=3 Tax=Fucus... [more]
E6ZEQ8_ECTSI6.450e-1346.67Sec-independent transporter protein n=2 Tax=Ectoca... [more]
A0A4D6E696_9PHAE8.590e-1343.24SecY-independent transporter protein n=2 Tax=Lamin... [more]
A0A8F0K1B9_9PHAE9.000e-1345.45SecY-independent transporter protein n=7 Tax=Alari... [more]
A0A8F0JZS6_9PHAE9.000e-1345.45SecY-independent transporter protein n=1 Tax=Cymat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002033Sec-independent periplasmic protein translocase TatCPFAMPF00902TatCcoord: 6..56
e-value: 5.4E-9
score: 36.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..70
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..44
NoneNo IPR availableTMHMMTMhelixcoord: 24..43
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig92199contigS-dermatodea_contig92199:270..512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig92199.17283.1mRNA_S-dermatodea_contig92199.17283.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig92199 3..555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig92199.17283.1 ID=prot_S-dermatodea_contig92199.17283.1|Name=mRNA_S-dermatodea_contig92199.17283.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=81bp
MSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQ
IILALPIILFYEIQIVIWIIHKTYKNLLLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002033TatC