mRNA_S-dermatodea_contig92199.17283.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0FDI8_9PHAE (SecY-independent transporter protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDI8_9PHAE) HSP 1 Score: 163 bits (412), Expect = 3.830e-47 Identity = 88/165 (53.33%), Postives = 117/165 (70.91%), Query Frame = 1
Query: 1 SLLIGIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKN 495
S++IGI IS+IQLYLFLRPGLY EAK I IT Y+ IYI LP+II SW FF +YT+ F +LIF+PQ++ Y+N+I + ++ N SYP+ I ++L L+Y + ILT +R IVY ITF ILTPPDII+Q + + II+FYEIQI+IW+I+K Y N
Sbjct: 71 SIVIGIMISVIQLYLFLRPGLYRNEAKKSFTLIIITLCFYIFIYILALPIIIQLSWEFFSSYTKTFNPTQLIFDPQLKNYLNYIYELSIIINFSYPLIITLNLILSYVQIIILTKHRKIVYFITFTTATILTPPDIISQTFVGVFIIMFYEIQIIIWMIYKKYNN 235
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A089N2X8_PETFA (SecY-independent protein translocase component tatC n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N2X8_PETFA) HSP 1 Score: 141 bits (356), Expect = 1.480e-38 Identity = 73/168 (43.45%), Postives = 107/168 (63.69%), Query Frame = 1
Query: 1 SLLIGIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
S+ G+ +++Q+YLFLRPGLY++E+KI + + T Y +Y I PL+I F W FL Y+QNF I L FEP++ Y+ + + + LS P I ++L YTK K+ YRGI YI F + A +TPPDI++Q+ + PIILFYE+QI+ W ++K Y+ LL
Sbjct: 71 SISFGLITAILQIYLFLRPGLYSFESKIVLNILICTLLFYTYLYTTIFPLLIKFLWELFLTYSQNFAPIHLTFEPRLNDYLEHVQHLNEVLCLSLPSIITLNLLQRYTKKKLWVKYRGIAYIAAFSLAAFITPPDILSQVFIGFPIILFYELQIIFWALYKQYQEQLL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A4D6E696_9PHAE (SecY-independent transporter protein n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E696_9PHAE) HSP 1 Score: 140 bits (352), Expect = 5.310e-38 Identity = 69/164 (42.07%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 13 GIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
G+ I+LIQLYLFLRPGLY +E+K + F+ Y+ +Y+ + P+II W F +Y+QNF AI+L FEP+++ Y+ + + + +P I++++ YT IL YRGI YI F I A +TPPD+++Q ++ LP+I+FYEIQ+ W +H+ YK +L
Sbjct: 75 GLGIALIQLYLFLRPGLYAFESKTTFNVLIAAFFFYICLYLFLFPIIIKVLWKIFSSYSQNFIAIDLTFEPRLQDYLTHLQQLNKALTIGFPCLIILNILQIYTSRHILVKYRGIAYITAFSIAAFITPPDVLSQTLIGLPLIIFYEIQLKFWHLHEEYKKNIL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: D0IPX3_9PHAE (SecY-independent transporter protein n=4 Tax=Laminariaceae TaxID=33636 RepID=D0IPX3_9PHAE) HSP 1 Score: 139 bits (351), Expect = 5.770e-38 Identity = 71/164 (43.29%), Postives = 103/164 (62.80%), Query Frame = 1
Query: 13 GIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
G+ I+L QLYLFLRPGLY +EAK + F Y +Y+ + P+II W F Y+QNF AI+L FEP+++ Y+N + + LS+P I +++ YT + YRGI YI F I A +TPPD+++Q ++ LP I+FYEIQ+ +W +H+ YK LL
Sbjct: 75 GLGITLTQLYLFLRPGLYAFEAKTTFNLLITAFLFYACLYVFVFPIIIKVLWELFSTYSQNFTAIDLTFEPRLQDYLNHLQQLNKALTLSFPCLITLNIVQIYTDRQTWVKYRGIAYITAFSIAAFITPPDVLSQTLIGLPFIIFYEIQLKVWSLHEEYKKQLL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0K057_9PHAE (SecY-independent transporter protein n=1 Tax=Saccharina subsessilis TaxID=2173147 RepID=A0A8F0K057_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.150e-37 Identity = 67/157 (42.68%), Postives = 102/157 (64.97%), Query Frame = 1
Query: 34 QLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
QLYLFLRPGLY++EAK + F Y +Y+ + P+I+ W F +Y QNF AI+L FEP+++ Y++ + + LS+P I++++ YT + YRGI YI F I A +TPPD+++Q+++ LP+I+FYEIQ+ IW +H+ YK LL
Sbjct: 82 QLYLFLRPGLYDFEAKTTFNLLLTAFLFYTCLYVFVFPIIVKIFWELFSSYAQNFTAIDLTFEPRLQDYLSHLQQLNKALTLSFPCLIVLNIVQIYTNRQTWVKYRGIAYIAAFFIAAFITPPDVLSQVLIGLPLIMFYEIQLKIWSLHEEYKKQLL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0K0V4_9PHAE (SecY-independent transporter protein n=2 Tax=Agaraceae TaxID=2012474 RepID=A0A8F0K0V4_9PHAE) HSP 1 Score: 138 bits (347), Expect = 3.310e-37 Identity = 71/164 (43.29%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 13 GIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
G+ I+L QLYLFLRPGLY +EA+I + T Y +YI I P+I+ W F AY+QNF AI+L FEP++ Y++ + + LS+P I + + YT + YRGI YI+ F I A +TPPD+++Q ++ LP+I+FYEIQ+ W +++ YK LL
Sbjct: 75 GLGITLTQLYLFLRPGLYTFEARITFNLLITTIIFYSCLYIFIFPIIVKVLWELFSAYSQNFTAIDLTFEPRLHDYLSHLRQLNKALTLSFPCLIALQIVQIYTSRQTWVKYRGIAYIVAFSIAAFITPPDVLSQTLIGLPLIIFYEIQLKFWALYEGYKKQLL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0JZS6_9PHAE (SecY-independent transporter protein n=1 Tax=Cymathaere triplicata TaxID=309354 RepID=A0A8F0JZS6_9PHAE) HSP 1 Score: 137 bits (346), Expect = 4.670e-37 Identity = 71/164 (43.29%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 13 GIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
G+ I+L QLYLFLRPGLY +EAK + Y+ IY + P+I+ W F AY+QNF AI+L FEP+++ Y++ + + LS+P IL+++ YT + YRGI YI F I A +TPPD+++Q ++ LP+I+FYEIQI W +++ YK LL
Sbjct: 75 GLGIALTQLYLFLRPGLYAFEAKTTFHLLTTALIFYICIYTIVFPIIVKILWELFSAYSQNFTAIDLTFEPRLQDYLSHLQQLNTALTLSFPCLILLNIIQMYTNRETWIKYRGIAYITAFFIAAFITPPDVLSQTLIGLPLIIFYEIQIKFWSLYEEYKKQLL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: E6ZEQ8_ECTSI (Sec-independent transporter protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ8_ECTSI) HSP 1 Score: 136 bits (342), Expect = 1.850e-36 Identity = 72/168 (42.86%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 1 SLLIGIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
S+ GI++ Q Y+FLRPG+Y YE+ +K I F Y IYI + P +I SW FL Y+QNF I L FEP++ Y++ I + + S+P + ++L YT ++ +RGI YII F I A +TPPDII+QI++ P+I F+EIQI++W +K YK LL
Sbjct: 71 SISFGIFLIASQSYVFLRPGMYTYESSTFLKLIISAFCFYTYIYILVFPALIKVSWELFLTYSQNFTPINLTFEPRLNNYLDHIQQLNKILIFSFPCLLTLNLFQKYTNKQLWVKHRGIAYIIAFFIAAFITPPDIISQILVGAPLIFFFEIQIILWAFYKEYKKQLL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: S4S3T7_LAMHY (SecY-independent transporter protein n=8 Tax=Laminariaceae TaxID=33636 RepID=S4S3T7_LAMHY) HSP 1 Score: 135 bits (341), Expect = 2.620e-36 Identity = 70/164 (42.68%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 13 GIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
G+ I+L QLYLFLRPGLY +EA + F Y +YI + P+I+ W F AY+QNF AI+L FEP+++ Y+ + + LS+P I +++ YTK + YRGI YI F I A +TPPD+++Q ++ LP+I+FYEIQ+ +W +++ YK LL
Sbjct: 75 GLGITLTQLYLFLRPGLYAFEANTIFNLLITAFLFYTCLYIFVFPIIVKVLWELFSAYSQNFTAIDLTFEPRLKDYLYHLQQLNKTLTLSFPCIITLNIIQIYTKKQTWVKYRGIAYIAAFSIAAFITPPDVLSQTLIGLPLIVFYEIQLKLWFLYEEYKKQLL 238
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Match: A0A8F0FDV4_9PHAE (SecY-independent transporter protein n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FDV4_9PHAE) HSP 1 Score: 135 bits (340), Expect = 3.690e-36 Identity = 68/164 (41.46%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 13 GIWISLIQLYLFLRPGLYNYEAKIGIKFIYITFYSYLLIYIKILPLIIHFSWNFFLAYTQNFKAIELIFEPQIEKYVNFISAIGLMSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQIILALPIILFYEIQIVIWIIHKTYKNLLL 504
I I+L QLYLFLRPG Y +EAKI + Y+ +YI I P+I+ W F Y+QNF AI+L FEP++E Y++ + + LS+P +++++ YT + YRGI YI F I A +TPPDI++Q ++ P+I+FYE+Q+ W +++ YK LL
Sbjct: 75 SICITLTQLYLFLRPGFYTFEAKITFNLLITALIFYICLYIVIFPIIVKILWELFSTYSQNFTAIDLTFEPKLENYLSHLQQLNKALTLSFPCLVILNILQIYTNKQTWVKYRGIAYITAFSIAAFITPPDILSQTLIGFPLIIFYELQLKFWSLYEEYKKQLL 238 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig92199.17283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig92199.17283.1 >prot_S-dermatodea_contig92199.17283.1 ID=prot_S-dermatodea_contig92199.17283.1|Name=mRNA_S-dermatodea_contig92199.17283.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=81bp MSNLSYPIAILISLSLAYTKTKILTNYRGIVYIITFIITAILTPPDIITQback to top mRNA from alignment at S-dermatodea_contig92199:3..555+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig92199.17283.1 ID=mRNA_S-dermatodea_contig92199.17283.1|Name=mRNA_S-dermatodea_contig92199.17283.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=553bp|location=Sequence derived from alignment at S-dermatodea_contig92199:3..555+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig92199:3..555+ >mRNA_S-dermatodea_contig92199.17283.1 ID=mRNA_S-dermatodea_contig92199.17283.1|Name=mRNA_S-dermatodea_contig92199.17283.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at S-dermatodea_contig92199:3..555+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |