prot_S-dermatodea_contig9198.17259.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9198.17259.1
Unique Nameprot_S-dermatodea_contig9198.17259.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length115
Homology
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 3.090e-48
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMFGGAGSGS 109
            MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQM+RIE+AA  AHEKD+ MFGGAG+GS
Sbjct:    1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGS 90          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 8.710e-15
Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDI 99
            M  YW S ERYFCKYC +WL     S+R+H++ K+H++ + E  + KR+ K+K  + + DLK+Q+D IE+ A     +D+
Sbjct:    1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAEDM 80          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM)

HSP 1 Score: 73.9 bits (180), Expect = 1.200e-13
Identity = 32/80 (40.00%), Postives = 58/80 (72.50%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDI 99
            M+ YWVSQ++++C+YC++++++++ S   H+QGKKH E V +F R  R    +  + E   KR+++RIE+AA++ ++KDI
Sbjct:    1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKDI 80          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A5J5BSD2_9ASTE (Matrin-type domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BSD2_9ASTE)

HSP 1 Score: 71.6 bits (174), Expect = 1.190e-12
Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMF 102
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + V++     R+DK+   + E +  R +++IE  A R+++KD+  F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVSKKLTTMRQDKVAKEKEEKEAARALEQIEAKAKRSYQKDVATF 83          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: UPI000C1D7CA3 (zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7CA3)

HSP 1 Score: 69.3 bits (168), Expect = 9.010e-12
Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMF 102
            M  +WVSQ   +C +CK+++SN+ ASIRNH+ G +H + VA+     R+DK+   + + +  R +++IE  A R+++KD+ +F
Sbjct:    1 MTEFWVSQGNKWCDFCKIYISNNPASIRNHELGTRHKDNVAKKLNTMRQDKVAKEKEQKEAARVLEQIEAKAKRSYQKDLEVF 83          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A2I0I759_PUNGR (zinc finger protein ZOP1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I759_PUNGR)

HSP 1 Score: 68.9 bits (167), Expect = 1.160e-11
Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMF 102
            M  YWVSQ   +C +CK+++SN+ ASIRNH+ G++H + VA+     R+DK    + + +  R + +IE  A R+++KD+  F
Sbjct:    1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVAKKLDDMRKDKAAKEKQQQEAARAIQQIEAKAKRSYQKDVATF 83          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: H3AJW2_LATCH (Uncharacterized protein n=3 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AJW2_LATCH)

HSP 1 Score: 69.7 bits (169), Expect = 1.400e-11
Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 0
Query:   21 ASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMFGGAGSG 108
            A YW SQ + FC YCK W+++++ SI  H++GK H E VA+   + ++  +  A+ E+   ++   +E+AALRA+EKD+   G AG G
Sbjct:    1 ADYWKSQPKKFCDYCKCWIADNKPSIDFHEKGKNHKENVAKKISEIKKKSMDKAKEEAKKSKEFAAMEEAALRAYEKDLKRLGEAGLG 88          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A1Y1UL55_9FUNG (Matrin-type domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UL55_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 1.750e-11
Identity = 28/79 (35.44%), Postives = 54/79 (68.35%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKD 98
            M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV  + R  ++ K +  +     +R + ++E+AA + + +D
Sbjct:    1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKQEEDKEAEATRRMLQQVEKAAYKQYSQD 79          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A1Y2BXJ3_9FUNG (Matrin-type domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BXJ3_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 1.890e-11
Identity = 28/79 (35.44%), Postives = 55/79 (69.62%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKD 98
            M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV  + R  ++ K +  +   + K+ + +I++AA + + +D
Sbjct:    1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKKEEEKEAEETKKILQQIDKAAYKQYSQD 79          
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A2P5FZ54_TREOI (U1 small nuclear ribonucleoprotein C n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FZ54_TREOI)

HSP 1 Score: 68.2 bits (165), Expect = 2.150e-11
Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:   20 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDI 99
            M  YWVSQ   +C +CK++LSN+ ASIRNH+ G++H + VA+     R++K    + E +  R +++IE  A R+++KD+
Sbjct:    1 MTEYWVSQGNKWCDFCKIYLSNNPASIRNHELGQRHKDNVAKKLADMRKEKAAKEKEEKEATRLLEQIETKAKRSYQKDM 80          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI0_9PHAE3.090e-4892.22Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
F0WHY0_9STRA8.710e-1541.25Uncharacterized protein AlNc14C105G6187 n=1 Tax=Al... [more]
A0A397TAV1_9GLOM1.200e-1340.00Matrin-type domain-containing protein n=1 Tax=Glom... [more]
A0A5J5BSD2_9ASTE1.190e-1238.55Matrin-type domain-containing protein n=1 Tax=Nyss... [more]
UPI000C1D7CA39.010e-1237.35zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea e... [more]
A0A2I0I759_PUNGR1.160e-1138.55zinc finger protein ZOP1 n=1 Tax=Punica granatum T... [more]
H3AJW2_LATCH1.400e-1139.77Uncharacterized protein n=3 Tax=Latimeria chalumna... [more]
A0A1Y1UL55_9FUNG1.750e-1135.44Matrin-type domain-containing protein n=1 Tax=Piro... [more]
A0A1Y2BXJ3_9FUNG1.890e-1135.44Matrin-type domain-containing protein n=1 Tax=Neoc... [more]
A0A2P5FZ54_TREOI2.150e-1140.00U1 small nuclear ribonucleoprotein C n=2 Tax=Canna... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 27..62
e-value: 7.9E-7
score: 38.7
IPR013085U1-C, C2H2-type zinc fingerPFAMPF06220zf-U1coord: 28..62
e-value: 5.0E-11
score: 42.2
NoneNo IPR availableGENE3D3.30.160.60coord: 28..88
e-value: 1.9E-9
score: 39.5
IPR040023WW domain-binding protein 4PANTHERPTHR13173WW DOMAIN BINDING PROTEIN 4coord: 20..109
IPR000690Matrin/U1-C, C2H2-type zinc fingerPROSITEPS50171ZF_MATRINcoord: 30..61
score: 9.852
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 28..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9198contigS-dermatodea_contig9198:3485..5903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9198.17259.1mRNA_S-dermatodea_contig9198.17259.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9198 3485..5904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9198.17259.1 ID=prot_S-dermatodea_contig9198.17259.1|Name=mRNA_S-dermatodea_contig9198.17259.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=115bp
LRGRAAPPCSPLGRRVCNTMASYWVSQERYFCKYCKVWLSNHQASIRNHD
QGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIG
MFGGAGSGSASASST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR013085U1-CZ_Znf_C2H2
IPR040023WBP4
IPR000690Matrin/U1-C_Znf_C2H2
IPR036236Znf_C2H2_sf