mRNA_S-dermatodea_contig9198.17259.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A6H5JFI0_9PHAE (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFI0_9PHAE) HSP 1 Score: 168 bits (426), Expect = 3.090e-48 Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMFGGAGSGS 327
MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQM+RIE+AA AHEKD+ MFGGAG+GS
Sbjct: 1 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMERIEKAAQLAHEKDLAMFGGAGAGS 90
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: F0WHY0_9STRA (Uncharacterized protein AlNc14C105G6187 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY0_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 8.710e-15 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDI 297
M YW S ERYFCKYC +WL S+R+H++ K+H++ + E + KR+ K+K + + DLK+Q+D IE+ A +D+
Sbjct: 1 MTEYWKSNERYFCKYCDIWLQGDSISVRHHEKSKRHLDRIQEKLKAKRQAKVKSEREDKDLKKQLDEIERTAHARFAEDM 80
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A397TAV1_9GLOM (Matrin-type domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TAV1_9GLOM) HSP 1 Score: 73.9 bits (180), Expect = 1.200e-13 Identity = 32/80 (40.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDI 297
M+ YWVSQ++++C+YC++++++++ S H+QGKKH E V +F R R + + E KR+++RIE+AA++ ++KDI
Sbjct: 1 MSEYWVSQQKHWCQYCRIYIADNKPSRTMHEQGKKHKENVEKFLRDIRRRDHENRKEEEKTKRELERIERAAMKQYKKDI 80
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A5J5BSD2_9ASTE (Matrin-type domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BSD2_9ASTE) HSP 1 Score: 71.6 bits (174), Expect = 1.190e-12 Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMF 306
M YWVSQ +C +CK+++SN+ ASIRNH+ G++H + V++ R+DK+ + E + R +++IE A R+++KD+ F
Sbjct: 1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVSKKLTTMRQDKVAKEKEEKEAARALEQIEAKAKRSYQKDVATF 83
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: UPI000C1D7CA3 (zinc finger protein ZOP1 isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7CA3) HSP 1 Score: 69.3 bits (168), Expect = 9.010e-12 Identity = 31/83 (37.35%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMF 306
M +WVSQ +C +CK+++SN+ ASIRNH+ G +H + VA+ R+DK+ + + + R +++IE A R+++KD+ +F
Sbjct: 1 MTEFWVSQGNKWCDFCKIYISNNPASIRNHELGTRHKDNVAKKLNTMRQDKVAKEKEQKEAARVLEQIEAKAKRSYQKDLEVF 83
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A2I0I759_PUNGR (zinc finger protein ZOP1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I759_PUNGR) HSP 1 Score: 68.9 bits (167), Expect = 1.160e-11 Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMF 306
M YWVSQ +C +CK+++SN+ ASIRNH+ G++H + VA+ R+DK + + + R + +IE A R+++KD+ F
Sbjct: 1 MTEYWVSQGNKWCDFCKIFISNNPASIRNHELGQRHKDNVAKKLDDMRKDKAAKEKQQQEAARAIQQIEAKAKRSYQKDVATF 83
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: H3AJW2_LATCH (Uncharacterized protein n=3 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AJW2_LATCH) HSP 1 Score: 69.7 bits (169), Expect = 1.400e-11 Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 61 ASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDIGMFGGAGSG 324
A YW SQ + FC YCK W+++++ SI H++GK H E VA+ + ++ + A+ E+ ++ +E+AALRA+EKD+ G AG G
Sbjct: 1 ADYWKSQPKKFCDYCKCWIADNKPSIDFHEKGKNHKENVAKKISEIKKKSMDKAKEEAKKSKEFAAMEEAALRAYEKDLKRLGEAGLG 88
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A1Y1UL55_9FUNG (Matrin-type domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UL55_9FUNG) HSP 1 Score: 68.2 bits (165), Expect = 1.750e-11 Identity = 28/79 (35.44%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKD 294
M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV + R ++ K + + +R + ++E+AA + + +D
Sbjct: 1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKQEEDKEAEATRRMLQQVEKAAYKQYSQD 79
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A1Y2BXJ3_9FUNG (Matrin-type domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BXJ3_9FUNG) HSP 1 Score: 68.2 bits (165), Expect = 1.890e-11 Identity = 28/79 (35.44%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKD 294
M+ YWVS ++Y+CKYCK+++++++ S +NHD G+KH EIV + R ++ K + + + K+ + +I++AA + + +D
Sbjct: 1 MSEYWVSNKKYYCKYCKIYITDNKISRQNHDNGRKHKEIVQMYIRDVQKRKKEEEKEAEETKKILQQIDKAAYKQYSQD 79
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Match: A0A2P5FZ54_TREOI (U1 small nuclear ribonucleoprotein C n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FZ54_TREOI) HSP 1 Score: 68.2 bits (165), Expect = 2.150e-11 Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 58 MASYWVSQERYFCKYCKVWLSNHQASIRNHDQGKKHVEIVAEFFRKKREDKLKGAQSESDLKRQMDRIEQAALRAHEKDI 297
M YWVSQ +C +CK++LSN+ ASIRNH+ G++H + VA+ R++K + E + R +++IE A R+++KD+
Sbjct: 1 MTEYWVSQGNKWCDFCKIYLSNNPASIRNHELGQRHKDNVAKKLADMRKEKAAKEKEEKEATRLLEQIETKAKRSYQKDM 80 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9198.17259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9198.17259.1 >prot_S-dermatodea_contig9198.17259.1 ID=prot_S-dermatodea_contig9198.17259.1|Name=mRNA_S-dermatodea_contig9198.17259.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=115bp LRGRAAPPCSPLGRRVCNTMASYWVSQERYFCKYCKVWLSNHQASIRNHDback to top mRNA from alignment at S-dermatodea_contig9198:3485..5904+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9198.17259.1 ID=mRNA_S-dermatodea_contig9198.17259.1|Name=mRNA_S-dermatodea_contig9198.17259.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2420bp|location=Sequence derived from alignment at S-dermatodea_contig9198:3485..5904+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9198:3485..5904+ >mRNA_S-dermatodea_contig9198.17259.1 ID=mRNA_S-dermatodea_contig9198.17259.1|Name=mRNA_S-dermatodea_contig9198.17259.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at S-dermatodea_contig9198:3485..5904+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |