prot_S-dermatodea_contig91874.17250.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig91874.17250.1
Unique Nameprot_S-dermatodea_contig91874.17250.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length45
Homology
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A2I4Q318_9PHAE (Photosystem II reaction center protein K n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q318_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.710e-18
Identity = 40/44 (90.91%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 MVVIFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            MVV+FLNKLPELY IFSPLVDILP+IPVLFLLLAF+WQASVGFR
Sbjct:    1 MVVVFLNKLPELYVIFSPLVDILPVIPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A8F0F735_9PHAE (Photosystem II reaction center protein K n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F735_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.410e-17
Identity = 37/44 (84.09%), Postives = 43/44 (97.73%), Query Frame = 0
Query:    1 MVVIFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            MV++FLNKLPELY IFSP+VDILP++PVLFLLLAF+WQASVGFR
Sbjct:    1 MVILFLNKLPELYLIFSPVVDILPVVPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A1L2F1W9_9PHAE (Photosystem II reaction center protein K n=3 Tax=Fucales TaxID=3009 RepID=A0A1L2F1W9_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.560e-15
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    4 IFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            + L KLPELY+I+SP+VDILPIIPVLFLLLAF+WQASVGFR
Sbjct:    4 VLLTKLPELYAIYSPIVDILPIIPVLFLLLAFLWQASVGFR 44          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A3R5UAE1_9STRA (Photosystem II reaction center protein K n=1 Tax=Pseudellipsoidion edaphicum TaxID=1431838 RepID=A0A3R5UAE1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.120e-14
Identity = 33/40 (82.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    5 FLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            FL KLPE++++FSPLVDILP+IPVLFLLLAFVWQA+VGFR
Sbjct:    5 FLAKLPEVFAVFSPLVDILPVIPVLFLLLAFVWQAAVGFR 44          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A4D6WWV2_9FLOR (Photosystem II reaction center protein K n=2 Tax=Ceramiaceae TaxID=31377 RepID=A0A4D6WWV2_9FLOR)

HSP 1 Score: 68.9 bits (167), Expect = 1.150e-14
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    4 IFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            IFL KLP+ YSIF PLVDILPIIPV FLLLAFVWQA+VGFR
Sbjct:    5 IFLTKLPDAYSIFRPLVDILPIIPVFFLLLAFVWQAAVGFR 45          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A1Y9TMC7_9RHOD (Photosystem II reaction center protein K n=1 Tax=Bulboplastis apyrenoidosa TaxID=1070855 RepID=A0A1Y9TMC7_9RHOD)

HSP 1 Score: 68.6 bits (166), Expect = 1.630e-14
Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    4 IFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            + LNKLPE+Y+IF PL+DILP++PV FLLLAFVWQA+VGFR
Sbjct:    5 LLLNKLPEIYTIFKPLIDILPVVPVFFLLLAFVWQAAVGFR 45          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A7S6U9V7_9STRA (Photosystem II reaction center protein K n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.270e-14
Identity = 32/44 (72.73%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MVVIFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            M +I ++KLP+ Y+IFSP++DILPI+PVLFLLLAFVWQA+VGFR
Sbjct:    1 MEIILISKLPDAYTIFSPIIDILPIVPVLFLLLAFVWQAAVGFR 44          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A0C5DZG8_GRALE (Photosystem II reaction center protein K n=8 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A0C5DZG8_GRALE)

HSP 1 Score: 68.2 bits (165), Expect = 2.320e-14
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 MVVIFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            M +I L KLPE YSIF PLVDILP+IPV FLLLAFVWQA++GFR
Sbjct:    2 MTMILLTKLPEAYSIFRPLVDILPVIPVFFLLLAFVWQAAIGFR 45          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A3G3MHZ3_9FLOR (Photosystem II reaction center protein K n=1 Tax=Rhodogorgon sp. TaxID=2485824 RepID=A0A3G3MHZ3_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 2.320e-14
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    5 FLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            FL KLPE+Y+IF PLVDILP+IPV FLLLAFVWQA+VGFR
Sbjct:    6 FLAKLPEIYAIFKPLVDILPVIPVFFLLLAFVWQAAVGFR 45          
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Match: A0A1X9PUI9_9RHOD (Photosystem II reaction center protein K n=1 Tax=Flintiella sanguinaria TaxID=101926 RepID=A0A1X9PUI9_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 2.320e-14
Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    3 VIFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR 44
            ++  +KLPE Y+IF PLVDILP+IPVLFLLLAFVWQASVGFR
Sbjct:    4 ILLFSKLPEAYAIFKPLVDILPVIPVLFLLLAFVWQASVGFR 45          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig91874.17250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I4Q318_9PHAE1.710e-1890.91Photosystem II reaction center protein K n=1 Tax=D... [more]
A0A8F0F735_9PHAE1.410e-1784.09Photosystem II reaction center protein K n=1 Tax=P... [more]
A0A1L2F1W9_9PHAE5.560e-1582.93Photosystem II reaction center protein K n=3 Tax=F... [more]
A0A3R5UAE1_9STRA1.120e-1482.50Photosystem II reaction center protein K n=1 Tax=P... [more]
A0A4D6WWV2_9FLOR1.150e-1485.37Photosystem II reaction center protein K n=2 Tax=C... [more]
A0A1Y9TMC7_9RHOD1.630e-1475.61Photosystem II reaction center protein K n=1 Tax=B... [more]
A0A7S6U9V7_9STRA2.270e-1472.73Photosystem II reaction center protein K n=1 Tax=S... [more]
A0A0C5DZG8_GRALE2.320e-1477.27Photosystem II reaction center protein K n=8 Tax=R... [more]
A0A3G3MHZ3_9FLOR2.320e-1482.50Photosystem II reaction center protein K n=1 Tax=R... [more]
A0A1X9PUI9_9RHOD2.320e-1478.57Photosystem II reaction center protein K n=1 Tax=F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003687Photosystem II PsbKPFAMPF02533PsbKcoord: 5..44
e-value: 1.6E-24
score: 85.7
IPR003687Photosystem II PsbKPANTHERPTHR35325FAMILY NOT NAMEDcoord: 4..44
IPR003687Photosystem II PsbKHAMAPMF_00441PSII_PsbKcoord: 6..44
score: 18.732
NoneNo IPR availablePANTHERPTHR35325:SF1PHOTOSYSTEM II REACTION CENTER PROTEIN Kcoord: 4..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR037270Photosystem II PsbK superfamilySUPERFAMILY161037Photosystem II reaction center protein K, PsbKcoord: 8..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig91874contigS-dermatodea_contig91874:189..323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig91874.17250.1mRNA_S-dermatodea_contig91874.17250.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig91874 189..323 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig91874.17250.1 ID=prot_S-dermatodea_contig91874.17250.1|Name=mRNA_S-dermatodea_contig91874.17250.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=45bp
MVVIFLNKLPELYSIFSPLVDILPIIPVLFLLLAFVWQASVGFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003687PSII_PsbK
IPR037270PSII_PsbK_sf