prot_S-dermatodea_contig91473.17219.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig91473.17219.1
Unique Name	prot_S-dermatodea_contig91473.17219.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	90

Homology

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5JYF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF9_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.650e-18
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 0

Query:    2 RVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLA----DVSPIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            RV+S GGK Y L++KDDY+R+  +YFL+ K +A E F ++LA    D +P +VIV RSD+G EF       +C    I+ EFT A  PE+NGV
Sbjct:  180 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVIVVRSDNGGEFFEGEIGKVCRKYCIKEEFTAAHSPEYNGV 272

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.190e-17
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0

Query:    3 VESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADVS----PIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            + S GGK Y +++KDD++R+T++YFLR K +A   F  FLA V     P  V + RSD+G +F G  F+S+CN   I+ EFT A  P++NGV
Sbjct:  105 IASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGV 196

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5K622_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K622_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.830e-17
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    3 VESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADVS----PIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            V S GGK Y +++KDD++R  ++YFLR K +A   F  FLA+V     P  + + RSD+G EF G  F+S+CN   I+ EFT A  PEFNGV
Sbjct:  488 VASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGV 579

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.830e-17
Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 0

Query:    3 VESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADVS----PIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            V S GGK Y +++KDD++R  ++YFLR K +A   F  FLA+V     P  + + RSD+G EF G  F+S+CN   I+ EFT A  PEFNGV
Sbjct:  464 VASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGV 555

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.900e-17
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 0

Query:    2 RVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADV----SPIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            RV+S GGK Y L++KDDY+R+  +YFL+ K +A E F ++LA+     +P +V+V RSD+G EF    F  +C    I+ EFT A  PE++GV
Sbjct:   46 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYDGV 138

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.400e-17
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0

Query:    2 RVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADV----SPIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            RV+S GGK Y L++KDDY+R+  +YFL+ K +A E F ++LA+     +P +V+V RSD+G EF    F  +C    I+ EFT A  PE+NGV
Sbjct: 1013 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGV 1105

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.400e-17
Identity = 43/93 (46.24%), Postives = 60/93 (64.52%), Query Frame = 0

Query:    2 RVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFL----ADVSPIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            R +S GGK Y L++KDDY+R+  +YFL+ K +A E F ++L    AD +P +V+V RSD+G EF    F  +C    I+ EFT A  PE+NGV
Sbjct:  378 RAQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGV 470

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.430e-17
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0

Query:    2 RVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADV----SPIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            RV+S GGK Y L++KDDY+R+  +YFL+ K +A E F ++LA+     +P +V+V RSD+G EF    F  +C    I+ EFT A  PE+NGV
Sbjct:  745 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGV 837

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.430e-17
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0

Query:    2 RVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADV----SPIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            RV+S GGK Y L++KDDY+R+  +YFL+ K +A E F ++LA+     +P +V+V RSD+G EF    F  +C    I+ EFT A  PE+NGV
Sbjct:  580 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGV 672

[Close]

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 3.430e-17
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0

Query:    2 RVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADV----SPIEVIVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV 90
            RV+S GGK Y L++KDDY+R+  +YFL+ K +A E F ++LA+     +P +V+V RSD+G EF    F  +C    I+ EFT A  PE+NGV
Sbjct:  593 RVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGV 685

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig91473.17219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JYF9_9PHAE	3.650e-18	47.31	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KVR5_9PHAE	1.190e-17	45.65	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K622_9PHAE	1.830e-17	47.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JH25_9PHAE	1.830e-17	47.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J7U9_9PHAE	1.900e-17	45.16	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K583_9PHAE	3.400e-17	46.24	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1N9_9PHAE	3.400e-17	46.24	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JTI6_9PHAE	3.430e-17	46.24	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JZQ8_9PHAE	3.430e-17	46.24	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN00_9PHAE	3.430e-17	46.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..90 e-value: 2.1E-14 score: 55.2
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 3..90 e-value: 3.1E-11 score: 43.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..90 score: 10.607
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig91473	contig	S-dermatodea_contig91473:302..571 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig91473.17219.1	mRNA_S-dermatodea_contig91473.17219.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig91473 302..571 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig91473.17219.1 ID=prot_S-dermatodea_contig91473.17219.1|Name=mRNA_S-dermatodea_contig91473.17219.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=90bp
XRVESKGGKRYMLLIKDDYSRYTFLYFLRRKKEAHELFAKFLADVSPIEV
IVTRSDDGREFRGEGFSSLCNLRKIRHEFTTADRPEFNGV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf