prot_S-dermatodea_contig9146.17218.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9146.17218.1
Unique Nameprot_S-dermatodea_contig9146.17218.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length366
Homology
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A131YIR1_RHIAP (NEDD8 n=5 Tax=Ixodidae TaxID=6939 RepID=A0A131YIR1_RHIAP)

HSP 1 Score: 62.8 bits (151), Expect = 5.590e-9
Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 0
Query:   67 IRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPRDAAGPGDASTRGSGICRPWC 146
            I +  TDRVE IK+ +++K  IP  +Q LIF    + D KTAAD  +T G+ LHLV+           + RG G+ R WC
Sbjct:   15 IDIEPTDRVERIKERVEEKEGIPPAQQRLIFSGKQMNDDKTAADYKVTGGSVLHLVL-----------ALRGGGVTRRWC 83          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A1D6Y7N2_9VIRU (Ubiquitin n=1 Tax=Golden Marseillevirus TaxID=1720526 RepID=A0A1D6Y7N2_9VIRU)

HSP 1 Score: 58.2 bits (139), Expect = 1.840e-7
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   62 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 126
            G    + + S+D VE +KQ IQ+K  I A++Q LIF   +LEDG+T AD  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDSVETVKQKIQEKEGISADQQRLIFAGKSLEDGRTLADYNIQKESTLHLVLRLR 74          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: UPI0013F34EFE (ubiquitin-like n=1 Tax=Rattus rattus TaxID=10117 RepID=UPI0013F34EFE)

HSP 1 Score: 57.4 bits (137), Expect = 3.630e-7
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   62 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 126
            G  + + + S+D +E +K  IQDK  +P E+Q LIF    LEDG+T +D  I + + LHLV++ R
Sbjct:   10 GKTTTLEVESSDTIENVKAQIQDKEGVPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A0G4I0A1_9ALVE (Ubiquitin-like domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I0A1_9ALVE)

HSP 1 Score: 57.4 bits (137), Expect = 6.150e-7
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   62 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 126
            G    + +  +D +E +K+ IQDK  IPA++Q LIF    LEDG+TA+D  I +   LHLV++ R
Sbjct:   10 GKTITLDVEPSDSIEQVKEKIQDKEGIPADQQRLIFSGKQLEDGRTASDYNIQRETTLHLVLQLR 74          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A2K6F9K3_PROCO (NEDD8 n=1 Tax=Propithecus coquereli TaxID=379532 RepID=A0A2K6F9K3_PROCO)

HSP 1 Score: 57.0 bits (136), Expect = 6.390e-7
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 0
Query:   51 VVVLMLDGAADGAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPRDAAG 130
            V+ + LD    G    I +  TD+VE IK+ +++K  IP ++Q LI+    + D KTAAD  I  G+ LHLV+  R   G
Sbjct:    4 VISIFLDITLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGGGG 83          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A5D2T1M8_GOSMU (Ubiquitin-like domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5D2T1M8_GOSMU)

HSP 1 Score: 57.4 bits (137), Expect = 9.470e-7
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   62 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 126
            G    + + S+D ++ +K N+QDK  IP ++Q LIF    LEDG+T AD  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDTIDNVKANVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A3G4ZYU7_9VIRU (Polyubiquitin n=1 Tax=Gaeavirus sp. TaxID=2487767 RepID=A0A3G4ZYU7_9VIRU)

HSP 1 Score: 58.5 bits (140), Expect = 9.880e-7
Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
Query:   69 LSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 126
            + ++D +E +KQ IQDK  IPA++Q L++    LEDGKT AD G+   + +HLV++ R
Sbjct:   93 VEASDPIESVKQKIQDKEGIPADQQRLVYNGKQLEDGKTIADYGVQAESTVHLVLRLR 150          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A7N6BN42_ANATE (NEDD8 n=4 Tax=Anabantaria TaxID=1489892 RepID=A0A7N6BN42_ANATE)

HSP 1 Score: 56.6 bits (135), Expect = 9.910e-7
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 0
Query:   67 IRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPRDAAGPGDASTRGSGICRPWCCWRSEL 152
            I +  TD+VE IK+ +++K  IP ++Q LI+    + D KTAAD  I  G+ LHLV+  R           GS +  PWC   S L
Sbjct:   15 IDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRG----------GSTLQSPWCLHLSFL 90          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: UPI00129E7C82 (ubiquitin-like n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E7C82)

HSP 1 Score: 57.8 bits (138), Expect = 1.020e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   62 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 126
            G    + + S+D ++ +K NIQDK  IP ++Q LIF    LEDG+T AD  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDTIDNVKANIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74          
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A0B7NUV8_9FUNG (Ubiquitin-like domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NUV8_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 1.040e-6
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   62 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 126
            G    + + S+DR++ +KQ IQDK  IP ++Q LIF    LEDG++ +D  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDRIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLR 74          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A131YIR1_RHIAP5.590e-941.25NEDD8 n=5 Tax=Ixodidae TaxID=6939 RepID=A0A131YIR1... [more]
A0A1D6Y7N2_9VIRU1.840e-744.62Ubiquitin n=1 Tax=Golden Marseillevirus TaxID=1720... [more]
UPI0013F34EFE3.630e-741.54ubiquitin-like n=1 Tax=Rattus rattus TaxID=10117 R... [more]
A0A0G4I0A1_9ALVE6.150e-743.08Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A2K6F9K3_PROCO6.390e-738.75NEDD8 n=1 Tax=Propithecus coquereli TaxID=379532 R... [more]
A0A5D2T1M8_GOSMU9.470e-741.54Ubiquitin-like domain-containing protein n=4 Tax=G... [more]
A0A3G4ZYU7_9VIRU9.880e-744.83Polyubiquitin n=1 Tax=Gaeavirus sp. TaxID=2487767 ... [more]
A0A7N6BN42_ANATE9.910e-738.37NEDD8 n=4 Tax=Anabantaria TaxID=1489892 RepID=A0A7... [more]
UPI00129E7C821.020e-643.08ubiquitin-like n=1 Tax=Nymphaea colorata TaxID=210... [more]
A0A0B7NUV8_9FUNG1.040e-641.54Ubiquitin-like domain-containing protein n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 63..83
score: 25.08
coord: 105..126
score: 41.45
coord: 84..104
score: 50.12
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 49..124
e-value: 6.8E-15
score: 65.5
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 65..126
e-value: 6.2E-15
score: 54.7
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 49..128
score: 16.69
NoneNo IPR availableGENE3D3.10.20.90coord: 48..137
e-value: 1.5E-16
score: 61.9
NoneNo IPR availablePANTHERPTHR10666:SF318coord: 66..179
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 66..179
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 44..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9146contigS-dermatodea_contig9146:837..7617 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9146.17218.1mRNA_S-dermatodea_contig9146.17218.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9146 784..8761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9146.17218.1 ID=prot_S-dermatodea_contig9146.17218.1|Name=mRNA_S-dermatodea_contig9146.17218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=366bp
MAAVPAREETRESARYKAPAAGGGSMGGRPQPWAISDLLSDDPVPSGMFE
VVVLMLDGAADGAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDA
TLEDGKTAADCGITQGAKLHLVVKPRDAAGPGDASTRGSGICRPWCCWRS
ELPVDEPERKAGEARSAPALKRMDSITFKSFKNVGAVPRSPREEAAANAV
VNRAETQFRAWLLGKQRKVLFVNRTDRRVHVFVFPGQEKTKTLDNAKVGL
PTPVGEVSTGVKLESNKTSHAGAFRPNHVDLPACTNVATFQAMNIWEHTA
RRVHFMIATLDGSTITLWSRGDVEGGHQLDIQQAIFGDGADFLSQASYVD
SEGKKDVVPVVQGWL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf