mRNA_S-dermatodea_contig9146.17218.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9146.17218.1
Unique NamemRNA_S-dermatodea_contig9146.17218.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A131YIR1_RHIAP (NEDD8 n=5 Tax=Ixodidae TaxID=6939 RepID=A0A131YIR1_RHIAP)

HSP 1 Score: 62.8 bits (151), Expect = 1.290e-8
Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 3 
Query:  252 IRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPRDAAGPGDASTRGSGICRPWC 491
            I +  TDRVE IK+ +++K  IP  +Q LIF    + D KTAAD  +T G+ LHLV+           + RG G+ R WC
Sbjct:   15 IDIEPTDRVERIKERVEEKEGIPPAQQRLIFSGKQMNDDKTAADYKVTGGSVLHLVL-----------ALRGGGVTRRWC 83
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A1D6Y7N2_9VIRU (Ubiquitin n=1 Tax=Golden Marseillevirus TaxID=1720526 RepID=A0A1D6Y7N2_9VIRU)

HSP 1 Score: 58.2 bits (139), Expect = 4.060e-7
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 3 
Query:  237 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 431
            G    + + S+D VE +KQ IQ+K  I A++Q LIF   +LEDG+T AD  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDSVETVKQKIQEKEGISADQQRLIFAGKSLEDGRTLADYNIQKESTLHLVLRLR 74
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: UPI0013F34EFE (ubiquitin-like n=1 Tax=Rattus rattus TaxID=10117 RepID=UPI0013F34EFE)

HSP 1 Score: 57.4 bits (137), Expect = 8.000e-7
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 3 
Query:  237 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 431
            G  + + + S+D +E +K  IQDK  +P E+Q LIF    LEDG+T +D  I + + LHLV++ R
Sbjct:   10 GKTTTLEVESSDTIENVKAQIQDKEGVPPEQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A0G4I0A1_9ALVE (Ubiquitin-like domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I0A1_9ALVE)

HSP 1 Score: 57.4 bits (137), Expect = 1.400e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 3 
Query:  237 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 431
            G    + +  +D +E +K+ IQDK  IPA++Q LIF    LEDG+TA+D  I +   LHLV++ R
Sbjct:   10 GKTITLDVEPSDSIEQVKEKIQDKEGIPADQQRLIFSGKQLEDGRTASDYNIQRETTLHLVLQLR 74
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A2K6F9K3_PROCO (NEDD8 n=1 Tax=Propithecus coquereli TaxID=379532 RepID=A0A2K6F9K3_PROCO)

HSP 1 Score: 57.0 bits (136), Expect = 1.430e-6
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 3 
Query:  204 VVVLMLDGAADGAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPRDAAG 443
            V+ + LD    G    I +  TD+VE IK+ +++K  IP ++Q LI+    + D KTAAD  I  G+ LHLV+  R   G
Sbjct:    4 VISIFLDITLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGGGG 83
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A5D2T1M8_GOSMU (Ubiquitin-like domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A5D2T1M8_GOSMU)

HSP 1 Score: 57.4 bits (137), Expect = 2.210e-6
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 3 
Query:  237 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 431
            G    + + S+D ++ +K N+QDK  IP ++Q LIF    LEDG+T AD  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDTIDNVKANVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A7N6BN42_ANATE (NEDD8 n=4 Tax=Anabantaria TaxID=1489892 RepID=A0A7N6BN42_ANATE)

HSP 1 Score: 56.6 bits (135), Expect = 2.230e-6
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 3 
Query:  252 IRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPRDAAGPGDASTRGSGICRPWCCWRSEL 509
            I +  TD+VE IK+ +++K  IP ++Q LI+    + D KTAAD  I  G+ LHLV+  R           GS +  PWC   S L
Sbjct:   15 IDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRG----------GSTLQSPWCLHLSFL 90
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: UPI00129E7C82 (ubiquitin-like n=1 Tax=Nymphaea colorata TaxID=210225 RepID=UPI00129E7C82)

HSP 1 Score: 57.8 bits (138), Expect = 2.430e-6
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 3 
Query:  237 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 431
            G    + + S+D ++ +K NIQDK  IP ++Q LIF    LEDG+T AD  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDTIDNVKANIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 74
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A0B7NUV8_9FUNG (Ubiquitin-like domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NUV8_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 2.430e-6
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 3 
Query:  237 GAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 431
            G    + + S+DR++ +KQ IQDK  IP ++Q LIF    LEDG++ +D  I + + LHLV++ R
Sbjct:   10 GKTITLEVESSDRIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLRLR 74
[Close]
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Match: A0A3G4ZYU7_9VIRU (Polyubiquitin n=1 Tax=Gaeavirus sp. TaxID=2487767 RepID=A0A3G4ZYU7_9VIRU)

HSP 1 Score: 58.5 bits (140), Expect = 2.480e-6
Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 3 
Query:  258 LSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDATLEDGKTAADCGITQGAKLHLVVKPR 431
            + ++D +E +KQ IQDK  IPA++Q L++    LEDGKT AD G+   + +HLV++ R
Sbjct:   93 VEASDPIESVKQKIQDKEGIPADQQRLVYNGKQLEDGKTIADYGVQAESTVHLVLRLR 150
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9146.17218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A131YIR1_RHIAP1.290e-841.25NEDD8 n=5 Tax=Ixodidae TaxID=6939 RepID=A0A131YIR1... [more]
A0A1D6Y7N2_9VIRU4.060e-744.62Ubiquitin n=1 Tax=Golden Marseillevirus TaxID=1720... [more]
UPI0013F34EFE8.000e-741.54ubiquitin-like n=1 Tax=Rattus rattus TaxID=10117 R... [more]
A0A0G4I0A1_9ALVE1.400e-643.08Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A2K6F9K3_PROCO1.430e-638.75NEDD8 n=1 Tax=Propithecus coquereli TaxID=379532 R... [more]
A0A5D2T1M8_GOSMU2.210e-641.54Ubiquitin-like domain-containing protein n=4 Tax=G... [more]
A0A7N6BN42_ANATE2.230e-638.37NEDD8 n=4 Tax=Anabantaria TaxID=1489892 RepID=A0A7... [more]
UPI00129E7C822.430e-643.08ubiquitin-like n=1 Tax=Nymphaea colorata TaxID=210... [more]
A0A0B7NUV8_9FUNG2.430e-641.54Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A3G4ZYU7_9VIRU2.480e-644.83Polyubiquitin n=1 Tax=Gaeavirus sp. TaxID=2487767 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9146contigS-dermatodea_contig9146:784..8761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score65.5
Seed ortholog evalue6e-08
Seed eggNOG ortholog192875.XP_004349813.1
EggNOG free text desc.Ubiquitin homologues
EggNOG OGs3AMHA@33154,COG5272@1,KOG0001@2759
COG Functional cat.O
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size2295
Cds size1098
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925389.653428-UTR-S-dermatodea_contig9146:783..8361622925389.653428-UTR-S-dermatodea_contig9146:783..836Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9146 784..836 +
1694079900.7347307-UTR-S-dermatodea_contig9146:783..8361694079900.7347307-UTR-S-dermatodea_contig9146:783..836Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9146 784..836 +
1622925389.752582-UTR-S-dermatodea_contig9146:7617..87611622925389.752582-UTR-S-dermatodea_contig9146:7617..8761Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9146 7618..8761 +
1694079900.827338-UTR-S-dermatodea_contig9146:7617..87611694079900.827338-UTR-S-dermatodea_contig9146:7617..8761Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9146 7618..8761 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925389.6659777-CDS-S-dermatodea_contig9146:836..8521622925389.6659777-CDS-S-dermatodea_contig9146:836..852Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 837..852 +
1694079900.745534-CDS-S-dermatodea_contig9146:836..8521694079900.745534-CDS-S-dermatodea_contig9146:836..852Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 837..852 +
1622925389.6786416-CDS-S-dermatodea_contig9146:2241..23341622925389.6786416-CDS-S-dermatodea_contig9146:2241..2334Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 2242..2334 +
1694079900.757528-CDS-S-dermatodea_contig9146:2241..23341694079900.757528-CDS-S-dermatodea_contig9146:2241..2334Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 2242..2334 +
1622925389.6910677-CDS-S-dermatodea_contig9146:3180..32211622925389.6910677-CDS-S-dermatodea_contig9146:3180..3221Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 3181..3221 +
1694079900.7658997-CDS-S-dermatodea_contig9146:3180..32211694079900.7658997-CDS-S-dermatodea_contig9146:3180..3221Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 3181..3221 +
1622925389.7036028-CDS-S-dermatodea_contig9146:4826..50211622925389.7036028-CDS-S-dermatodea_contig9146:4826..5021Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 4827..5021 +
1694079900.7815046-CDS-S-dermatodea_contig9146:4826..50211694079900.7815046-CDS-S-dermatodea_contig9146:4826..5021Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 4827..5021 +
1622925389.714691-CDS-S-dermatodea_contig9146:5364..54791622925389.714691-CDS-S-dermatodea_contig9146:5364..5479Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 5365..5479 +
1694079900.8003697-CDS-S-dermatodea_contig9146:5364..54791694079900.8003697-CDS-S-dermatodea_contig9146:5364..5479Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 5365..5479 +
1622925389.72623-CDS-S-dermatodea_contig9146:5952..60291622925389.72623-CDS-S-dermatodea_contig9146:5952..6029Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 5953..6029 +
1694079900.808627-CDS-S-dermatodea_contig9146:5952..60291694079900.808627-CDS-S-dermatodea_contig9146:5952..6029Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 5953..6029 +
1622925389.7376323-CDS-S-dermatodea_contig9146:7056..76171622925389.7376323-CDS-S-dermatodea_contig9146:7056..7617Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 7057..7617 +
1694079900.818483-CDS-S-dermatodea_contig9146:7056..76171694079900.818483-CDS-S-dermatodea_contig9146:7056..7617Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9146 7057..7617 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9146.17218.1prot_S-dermatodea_contig9146.17218.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9146 837..7617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9146.17218.1

>prot_S-dermatodea_contig9146.17218.1 ID=prot_S-dermatodea_contig9146.17218.1|Name=mRNA_S-dermatodea_contig9146.17218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=366bp
MAAVPAREETRESARYKAPAAGGGSMGGRPQPWAISDLLSDDPVPSGMFE
VVVLMLDGAADGAVSIIRLSSTDRVEIIKQNIQDKMVIPAEEQHLIFKDA
TLEDGKTAADCGITQGAKLHLVVKPRDAAGPGDASTRGSGICRPWCCWRS
ELPVDEPERKAGEARSAPALKRMDSITFKSFKNVGAVPRSPREEAAANAV
VNRAETQFRAWLLGKQRKVLFVNRTDRRVHVFVFPGQEKTKTLDNAKVGL
PTPVGEVSTGVKLESNKTSHAGAFRPNHVDLPACTNVATFQAMNIWEHTA
RRVHFMIATLDGSTITLWSRGDVEGGHQLDIQQAIFGDGADFLSQASYVD
SEGKKDVVPVVQGWL*
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mRNA from alignment at S-dermatodea_contig9146:784..8761+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9146.17218.1 ID=mRNA_S-dermatodea_contig9146.17218.1|Name=mRNA_S-dermatodea_contig9146.17218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7978bp|location=Sequence derived from alignment at S-dermatodea_contig9146:784..8761+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGAGGTTTCCGTGAATTGGGTAGGAGGGGAAGCAGGGCGCGTCGGTGA
CAGATGGCGGCCGTTCCAGGTGAGTCCTTGTATGGCTCTTGGCGCACGGC
ATGGCAGCACTGTTACCGGGAACATCGTTAACGTTAACAGGTCAAAATTC
GCCACAAGTTTCAACCTAAAAATAACCAAAATTGGCTGGAGTTATCGAGA
TTTCAAGGCCGATGTTTTTGTATATAATTGTCATATCTCGTGTGTTATTT
TTTCGTGAGATTTTTTTATGTTGTTGTTTTGGGTATTCATGATCGAAATA
TTTGGGTATTATATTAATGGTTATGATATTTGGTCCTGATTACTTCATTA
CTTGATTATAGTGTACCTCACTAATATTAGTATAATAGTGCACAAATTAG
CGTCGCGCCAAAGGGAGGGGCGCCATGGCTGATAAATATGGATGCGCCAC
TTAAAACGTGCGAGTCGATTTATCAACGCCGCGCGGGAGGGGGTTCGGAA
ATTTGTTGAAGGTAAAGTAAACATGACGGTTTCCCGTGCAAGTCATCCAC
AAGTTCCCACGCTCGAACACGAACTCGGACAGAAGCAGACCCCACCTCCG
AAAAATCACCCACGCGATCCGGCTCTCGCTGCTGGGATATATAGGATAGG
ATATTGTCGATTGCCGCGCACGACCCTCCGCAAGCTTGCAGAGGAAAGTG
GGGCGCTTTGTATTTGCTCACTCAGGTATATATATATCGGGGTTCTCGAT
TGTTCCTATTTTGCGTTTGCGCCCCAAGTATCAAAACTCGCCGCCCAGTG
ATGAGCGTTTTTTGGTTCGTTGATTCACGCAAAAACTAATCGGCCGTCGC
AGCTGTATGACAGCAATCTATGATAGCAATGTATGATAGCAATGTATGAT
AGCAATGTATGATAGCAAAAGTATTATAGCAATGTATGATAGCAATCTGA
GCGTCGGCGAACGAAAGTTTATGGCGAAGGGGACAGACGCGCTCTAATAA
CCATATATGATAATATCCTTGCAAAATCCTCACGTATGTTCCAGTATCTT
TCAACCGGCACGTGCGACCCGGTCAAGAAGGAGAACGTTCGCCTGAAATA
GCGAGCTATTTTTGCGTTAGCGGCATTTAGGCAAACGAAGTACGAGCTCT
AAAAAATTCGCGCGAAGACGCGCTGACGCGGCCCGGCCCGCTTCTGCCGT
GCATTTGCTCGATGATGAGAGCTTTTCTATGCGCTGAGTTGTCTAACCCT
TCGCAATTGCAATGCAAACGGAGCGAGTTGTGGGATGCTACCCGATTGGC
CCATTTTGATGGCGCAGCGAAACTGAAAGCGCCGAGGGCCTACATCGGCG
TTGCTGCCTTTTGTCTCTGAAGAGTACCGGTACGTTTTGTCTCTCACGGG
TTCTGGCAGTTTTGATTTACACCTGAATATTTCCTTTCTGACGCCGTGCT
TGTCGCAGCTCGAGAGGAAACACGGGAGTCTGCCCGATACAAGGCTCCTG
CCGCGGGTGGAGGCTCGATGGGAGGTCGACCTCAACCGTGGGCCATCTCA
GGTATAACATCACACACACGGCAAGAGGCTGGTTGACCGTGCAAGACTTG
TATGTTCTGTCATGGTTCAAAGTAGGGGCGTACCTGGGTTCCCGACTCTT
ATCCTGTACTGCTGCGCATCGATCGGCAGTTGCTCGGACGCCAATTTATC
GGCTCTCGTCGTACGGCCGCGTTCATCACACGACGCGCAACAGCAACCCA
AATGCTTCACGAGCCCCAACACACAGTAGTGCGTCCCCGCTTACGATGGT
ACCTGTTTCTCTACAGACATGGGTTGATTGATTGGTTGATTTATTGATTT
TTGTTTTTTTTTGTCACACGTATAACCGACCGGAATTACATTTTTGCAAT
TGCAAAATAAAAGTGGATCCACTTACGATGGTACCTGTTTCTCTACAGAC
ATGGAGTAATTGATTGGTTGATTTATTGATTTTTCTATTTTTTGCCACAC
GTGTAACCGACCGGAACTCCATTTTGCAACTAACTGCAAAAAGTGAATGC
TGATCCCGCTAACTCTTGGTGACGTCACATGAAGCAGGCACAAGATGAGC
AAGCGAATTAAATCCTGATTTGACCGATGACCTATCATAGATTATGTTTT
TTATAAAATTGCAAAAGTGGATGCTGATCCCGCTCGTGGTCACATGAAGG
CACAAGAGCAAAAGTGAAAATCCAGCGCCCCTACACCGAACAAAAAACTG
ATGGCCAGACTTGACAAGAGATGTATAACCCGCACGCCGCCCGGAGCGAC
TGACCCCCTGATTTACATGGAGCAGTTTAGATTTTTACGAGCTCCCGCTT
AATCTTAATCTTAATCTTCATCTTCCTCTCTGTACCTTGCCCCACAGATT
TACTCTCTGATGACCCGGTGCCTTCCGGCATGTTCGAGGTAAGCAGTGCC
GCTGTCTAGGGGAATTCGTCGTGCAATTTCTGCGTCTCGCCCGACGGTGC
CGTGTCGCAGCCGAGCACGAGCAGTACGAGGCGACTTGTACGAACCGTCG
CTTTGCTCTATACGAAGGGGTGGACACGATTTTTAAGCTGGACGTAATTT
GCCGTTTATATTTTGTGGCGCGTTTTTCAGGGTCGGAAGGGTGGCGGGAG
GGAGGGAGGGAGCCACGGGGTACTTGGCTTTTGTGTTGAGAGCCTCTGTA
AGCCTCGCCTGTTCGCTGTTTGATGTTTGATTTATGATGCCGCTATCTGT
TTGTTCGGTGTGTACACTACAATAGATGGACCTGAAACGGCCGGGAAGGT
TCGAATTTTATAGCACAAAAATGTGGCAGAGGGGTGGCCTGGGGGTATTA
TGTATGGCAATCGTAGGCGTGCGTGTGTGTGACACTCCCACCACCTCAGT
TTCACTACTGTTTGTTCTACAACTTCTCGCGCATCCGACTTGTTAGCCTT
TCCCGGATTAGCCCGTTTTCGCCGAAATCGCCGCCGCGGGTATCGCGGTT
ATCAGGAACACATGCACAAGCTGCACCCTTGCATGAGAGCCAAGCGTGCT
AGCGGTGCGGTCGCACTTTGCTACCGCACCACTACGTCGGCGCTGCCAAG
AGGGTCGGCGGTGATTTTGGGTCGCTGTTCTTTCTGTTCTTCCTCTGTTT
TGTCTGTTTTTTTTGTTTTTTTTTTTTCCGGGCGACCTCATTCATCTCTC
GCGCTCGTGGTTGCACGGTGCCTTTTTCTAATTCGTTTATTTTTTAATTG
CGTAACGGTTTTCCACTCGACATGGACATCGCGGGGGTGCGCTGATCCCT
CCCTTCCTGTGGGGGAGTTTTTTTTTTTTTTCTCTTAACCCTTTTTGGGA
CTAAGGCTGTTTTCGGGTAACTGTTTGCTATTATGGTTTACCCTTTTGGG
ACTAAGCCTGTTCCTAGGGACGAAGCCTGTTTTCGGGTAACTGTTGGCCA
CCATAACAGCAAACAGTTACCCGAAAACAGCCTTAGTCCCAAAACAAAAG
GATATGTAATAATAGCAAACAGTTACCCGAACACAGCTGTTGTCACAAAA
AGGTAAAGTAGGGCAATGTTCCGAAGTCTGTCCCCGCGCTTTTTTCTGAG
AGTGCGACAACTCCTTTGAATGTATATGTACTAAAAGTACATAGGTGCTT
CCGTAGGAGTTTTTCGGTCTCTCGATTTCTCATCTAACCACGAGCGAGAT
CGGCAACCTTTGGTGGGCCCCGGTCGGTTGTAAGTGTGAGAATAAAAAAT
CAAGTAATCGTTTTTATACGGCGCTAGCAAAGGGTCGCGAAAAACGGACG
CGGTCCCAAAAGGATATTTTTTGTTTCCTGCAGCTCTCCCCACTCCGCAC
CTAGAATTCTTTCTCGTAGAATGGGGTACCCAGTGTGTTAAAAATGTGAG
CCATATATTTTTGTTCGTTTACTGAAACCAAGCGCGTCCCTAACAGCCCA
CTCGCCAAGCTTACGATACGCCCGTGTCTACGGAACCCGCCTGCCCTTTT
GCGTTTTTTTTTTCTCGCTGGGTGCGCGTTTCGCCAACTGAAGGTGGTAG
TTTTGATGCTCGACGGTGCAGCCGACGGCGCGGTCTCGATAATTCGGCTG
TCAAGTACCGACAGGGTAGAGATCATCAAGCAGAACATCCAGGATAAGAT
GGTCATCCCTGCCGAAGAACAGCACCTCATCTTCAAGGATGCAACGCTCG
AGGATGGCAAGACTGCGGCGGACTGCGGAATCACGCAGGTGCGCCTTGAG
TATCATACTTGTTTTTTTTTTTTACACATATGATAGACTTGCTTTTCCGA
GGTCCGTCTGTGGTCACAACTCTGTACCCGTGTATTTCAAGCCACTCGTG
AGGTGCACGTGGGACGGACGACGAGGTACTAGAAGTCGCCCATCTGCTGA
CATTCCAACAGCGCACAGCTGAAGGTCAAATATTTGCTAAAGACAGGCCA
CCTCGCCCCACCGTCTCACAGACAACGACGAGGCTGCGTCATCGAGGGTC
GCATCGTTTTCTGCGCTGCCATCGCTTGTGTATCTGCGAAAAATGTGCAC
TGGTGACTTTAATATTTTGCCACACATGCAGGGTGCTAAACTTCACTTGG
TCGTCAAGCCCCGAGATGCCGCGGGACCTGGAGACGCATCCACAAGAGGC
TCAGGGATATGCAGGCCTTGGTGTTGTTGGAGAAGCGAGCTTCCAGGTGA
AGTGTGGGTGCATCGGTGGGTTGACCTTGATCTTGTGCGCGTGCGTGGAT
GGACCTGGCGGTATGACTGAAAGTGCGGCGTAGTGTCGCATTCACCGTTT
TGCTACAAGAAGGGGGTGTACTCATTGATCGTGCATGCCGTAGTCGTTAG
ACAGTAGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTTT
CGCCGGACCGGCTCGAGAAGTGGGGGGGGGGGAGGGCGGTGCTTATGTTC
CGTGCTCGAAGCCACTTTCCAAATGTGTACAGTAGGGCAGCAGTGACGGC
AACGTGAGGGCGCTCGGCGCGACCAGGGCTGGCTTGCCGAGAAGGGCCTC
GTAGTAAAACGACCTTCTGCTATAAGTGTCAAGTCCTCGGTATGCATATG
AACACATGATGGGACACCTTTGACGACGGCCAATCCCGGCACGGCATGTA
CCTCCACCCGTGTCTGCAGTCGACGAACCAGAACGTAAAGCTGGAGAGGC
CCGCTCGGCTCCAGCTTTGAAACGCATGGATTCCATCACGTTCAAGGTGG
GCAAGGTTTAGGTTTCGCCGGTGACAAGTGTTTTGGTAAGGCCGGGGAAA
ATCCAATCTGGCTGCGACGCACTTTGGGGTTAGGTTTGAACGACTTATTG
GGGCTGGTCGGAGAAGAGGGCGGTGGCGATCTACCAAGGTGTCTGTACCT
CACGCAACTCATCCTTCTTGTGACTGTTTCAACCAGCGCGAGACCTGGGA
TGTCGTAAAGGCCTTGCGCGTGCGGCCCCATCCCGGATCCCTGGGGTTTT
TTCTGGGCAACCGAAGTTCCGAGTTCTGCATTTTCTGATTTTCCGAGCGT
TTTGGTGATTTTCCATGTACATAGGTGGTTCTCTAGAGCTCTAATTCTGT
GATTTGTTTTTTTCTTCCGTCTGTCGATTTATCATCTTACGGTGAGCGCG
GGACCGGCAACCATTGGGCAACCATTGAGCAACCATTGGGCAACCATTGA
GCAACCATTGGGCAACCATTGGCATGATACCGTCTGTCGGTTAGTTGTGA
GCGTGATATTACACAAAAACGAATATCGCGTGTGTGCAGGGCGGGCTGAG
GTTGCCTCGTCCGGCTGTTCAGTTATCAATCGACAGCTCGTGAACACCTT
CAGCATTTCAGTTATTTTTTTCAGCAATTACCTATTTACGGGGGATTATA
CCAAAATTAACAGGTCCAAATTTGTCGCAAGTCTCAACAGTACCTAGAAA
AATCAAAATAGGCCGGAACTATCGAGATTTCAAGGTCGATTTTATTTTGT
GTGGCCATAATCTCGTGTTTTTTATTTTTTTGGTGATATTTTTGTTGTTG
TTTTGGGTATTCATGGTCGGAATATATATAGTATTATATAGTATTATAGT
TGGGTAATATTAGCCATGAGATTTGGGCCTATTAACTATGCTCCTCCGTC
ATAGTCTTAGTCTTAGTCTTGCCCGGACCTCATCGAGGTTGTAACCGCCT
TCCAGTGGCCTCGTTTCAAGTTGCATGAATACTGATGTTCTTTCATGGCC
TTTTGACACATGCCCGCGCGCAGAGCTTCAAGAACGTCGGAGCAGTCCCA
AGAAGCCCGCGAGAAGAAGCAGCAGCAAACGCCGTCGTGAACCGGGCAGA
AACGCAGTTCCGGGCCTGGCTTTTGGGGAAGCAGAGGAAGGTGCTGTTTG
TGAACCGCACGGACAGGCGCGTGCACGTGTTCGTCTTTCCCGGGCAAGAA
AAGACCAAGACCCTGGACAACGCCAAGGTGGGCTTGCCAACGCCTGTCGG
AGAAGTCTCCACCGGAGTGAAGCTGGAATCGAACAAAACGTCTCACGCGG
GAGCGTTCCGTCCAAACCACGTGGACCTCCCTGCCTGCACCAACGTCGCG
ACGTTCCAAGCGATGAACATCTGGGAACACACCGCCCGGCGAGTGCACTT
CATGATTGCCACGCTGGACGGCTCCACCATCACGCTTTGGAGTAGGGGCG
ACGTCGAAGGGGGGCACCAGTTGGACATACAGCAGGCGATTTTCGGCGAT
GGCGCCGACTTCTTGAGCCAAGCCTCGTACGTCGACTCCGAGGGGAAGAA
AGATGTGGTGCCGGTGGTGCAGGGTTGGCTGTAAGTCAACGCGATAGGTA
CCCCGACCTCGACCTCGACCCTCGCTACGCCGGTGACTGCGTTTGGCAAA
ACCCCGCCCTCCATCGAACCTCGCCGACAATAAGCCTCGGGCACGAGTCC
GGTTAGCGTGTGAAGTGCGCGGTACAACAGCGGTTGGTGGCCTAGCTTCT
TGGAATCGCCTTCCGTAGTATCATAGTGAAATTGGGGACGACTCGACCCA
ACGACAAGCTCTAAGGTCACCTTTGCATGCTTGCGCAGTATTTTCGCGTG
GGGGCAGGCTCAGCGTGTGGCAGGACTGAGGGTTATATTGGCTATCTAAG
CTTCGATCCGGCACTGCTCAGGCGTGGGAGGATACCTAGGTGTAGGCTTC
GGGCGGTGGAGTGTTTGGGTAGAGCTTGGCGCGCTCGGGTTGCTCTCAGC
AGCTTGACGTGTCGAGACGTACAGAGTTGGGCGTGCGAGTCTTGTCTTCT
TGCTCTCGGCGCATGAATTTGTGAAGCCACGCCTGTCGAGCGATGGCGTA
CCTGTTTTTTTAGAGTAGTCCCGGCTGGAGGATAGGCTTCGGAGACGCAC
GAAATCTTTAATCGTGCTCTATGCATGATAGCTCAGAGGAGGAAGACATC
CACGATATATTTTTATTCGATACAATAGTTGTTGAAGGATCCGGGCGCAG
GGCTTGCACGTACATGTGTTGGCGAAGCTTGTCTGTGCTCCCCCGATACC
GAATCTCCGCCCTTGCCCAGGCTGCGTTTCGTCCCTTGTTTTTCAGAGTC
TGGAAACACGTTTGACAGTGTATTTTACGCAGAGTTGCAGGCTTTCATAT
TAATAGCTCGTTTCTTTTTTTAACAGTAGAACTGGCACGAGTGAAAAGAG
CCGGGGGTGGGCAAGTGTGAGTTAGCAGACTGCTCTGCTTGGTTTTTTGC
GGTTTCGCTATTTAATGCACGGGTGACGTGTGCACTGGTTGGGGCAACCG
CGTGTTGAAAGTTGAAAGTGCTCCGGTTGGAATCGGAAGGCGGGGCATAG
AAATGATGAAGTACTACATACCGACATATCACTGCCGCCGCATACATGGG
TAAGGGCCGGTTCATACGAGCAGAAAAAATCGAGTTTAATTGCAAAAAAA
AAAAAAAAAATTAATTGATTTTTGCCGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig9146:784..8761+

>mRNA_S-dermatodea_contig9146.17218.1 ID=mRNA_S-dermatodea_contig9146.17218.1|Name=mRNA_S-dermatodea_contig9146.17218.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2196bp|location=Sequence derived from alignment at S-dermatodea_contig9146:784..8761+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGGCCGTTCCAGATGGCGGCCGTTCCAGCTCGAGAGGAAACACGGG
AGTCTGCCCGATACAAGGCTCCTGCCGCGGGTGGAGGCTCGATGGGAGGT
CGACCTCAACCGTGGGCCATCTCAGCTCGAGAGGAAACACGGGAGTCTGC
CCGATACAAGGCTCCTGCCGCGGGTGGAGGCTCGATGGGAGGTCGACCTC
AACCGTGGGCCATCTCAGATTTACTCTCTGATGACCCGGTGCCTTCCGGC
ATGTTCGAGATTTACTCTCTGATGACCCGGTGCCTTCCGGCATGTTCGAG
GTGGTAGTTTTGATGCTCGACGGTGCAGCCGACGGCGCGGTCTCGATAAT
TCGGCTGTCAAGTACCGACAGGGTAGAGATCATCAAGCAGAACATCCAGG
ATAAGATGGTCATCCCTGCCGAAGAACAGCACCTCATCTTCAAGGATGCA
ACGCTCGAGGATGGCAAGACTGCGGCGGACTGCGGAATCACGCAGGTGGT
AGTTTTGATGCTCGACGGTGCAGCCGACGGCGCGGTCTCGATAATTCGGC
TGTCAAGTACCGACAGGGTAGAGATCATCAAGCAGAACATCCAGGATAAG
ATGGTCATCCCTGCCGAAGAACAGCACCTCATCTTCAAGGATGCAACGCT
CGAGGATGGCAAGACTGCGGCGGACTGCGGAATCACGCAGGGTGCTAAAC
TTCACTTGGTCGTCAAGCCCCGAGATGCCGCGGGACCTGGAGACGCATCC
ACAAGAGGCTCAGGGATATGCAGGCCTTGGTGTTGTTGGAGAAGCGAGCT
TCCAGGGTGCTAAACTTCACTTGGTCGTCAAGCCCCGAGATGCCGCGGGA
CCTGGAGACGCATCCACAAGAGGCTCAGGGATATGCAGGCCTTGGTGTTG
TTGGAGAAGCGAGCTTCCAGTCGACGAACCAGAACGTAAAGCTGGAGAGG
CCCGCTCGGCTCCAGCTTTGAAACGCATGGATTCCATCACGTTCAAGTCG
ACGAACCAGAACGTAAAGCTGGAGAGGCCCGCTCGGCTCCAGCTTTGAAA
CGCATGGATTCCATCACGTTCAAGAGCTTCAAGAACGTCGGAGCAGTCCC
AAGAAGCCCGCGAGAAGAAGCAGCAGCAAACGCCGTCGTGAACCGGGCAG
AAACGCAGTTCCGGGCCTGGCTTTTGGGGAAGCAGAGGAAGGTGCTGTTT
GTGAACCGCACGGACAGGCGCGTGCACGTGTTCGTCTTTCCCGGGCAAGA
AAAGACCAAGACCCTGGACAACGCCAAGGTGGGCTTGCCAACGCCTGTCG
GAGAAGTCTCCACCGGAGTGAAGCTGGAATCGAACAAAACGTCTCACGCG
GGAGCGTTCCGTCCAAACCACGTGGACCTCCCTGCCTGCACCAACGTCGC
GACGTTCCAAGCGATGAACATCTGGGAACACACCGCCCGGCGAGTGCACT
TCATGATTGCCACGCTGGACGGCTCCACCATCACGCTTTGGAGTAGGGGC
GACGTCGAAGGGGGGCACCAGTTGGACATACAGCAGGCGATTTTCGGCGA
TGGCGCCGACTTCTTGAGCCAAGCCTCGTACGTCGACTCCGAGGGGAAGA
AAGATGTGGTGCCGGTGGTGCAGGGTTGGCTGTAAAGCTTCAAGAACGTC
GGAGCAGTCCCAAGAAGCCCGCGAGAAGAAGCAGCAGCAAACGCCGTCGT
GAACCGGGCAGAAACGCAGTTCCGGGCCTGGCTTTTGGGGAAGCAGAGGA
AGGTGCTGTTTGTGAACCGCACGGACAGGCGCGTGCACGTGTTCGTCTTT
CCCGGGCAAGAAAAGACCAAGACCCTGGACAACGCCAAGGTGGGCTTGCC
AACGCCTGTCGGAGAAGTCTCCACCGGAGTGAAGCTGGAATCGAACAAAA
CGTCTCACGCGGGAGCGTTCCGTCCAAACCACGTGGACCTCCCTGCCTGC
ACCAACGTCGCGACGTTCCAAGCGATGAACATCTGGGAACACACCGCCCG
GCGAGTGCACTTCATGATTGCCACGCTGGACGGCTCCACCATCACGCTTT
GGAGTAGGGGCGACGTCGAAGGGGGGCACCAGTTGGACATACAGCAGGCG
ATTTTCGGCGATGGCGCCGACTTCTTGAGCCAAGCCTCGTACGTCGACTC
CGAGGGGAAGAAAGATGTGGTGCCGGTGGTGCAGGGTTGGCTGTAA
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