prot_S-dermatodea_contig914.17214.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig914.17214.1
Unique Nameprot_S-dermatodea_contig914.17214.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length200
Homology
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A6H5L2C7_9PHAE (Bms1-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2C7_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 5.900e-123
Identity = 191/200 (95.50%), Postives = 196/200 (98.00%), Query Frame = 0
Query:    1 KVERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            KVERHNPRAFSV+ +GKTRK QQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITF+ECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLN+LQVHGFPKVMCVLTHLDRFDNVK LRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVR +
Sbjct:   33 KVERHNPRAFSVSKIGKTRKTQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFQECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNILQVHGFPKVMCVLTHLDRFDNVKALRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRNI 232          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: W7TXR8_9STRA (Ribosome biogenesis protein bms1-like protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXR8_9STRA)

HSP 1 Score: 270 bits (691), Expect = 4.770e-89
Identity = 136/200 (68.00%), Postives = 160/200 (80.00%), Query Frame = 0
Query:    2 VERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECP-DDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
             ERHNPRAFSV N+ +T++  QRNLDRAQ+KE VP VDR E +PPP +VVVMGP+G GK+TLIRSL+K YT  NL +  GPITVV+GK +R+TF ECP DDLC M+DLAK ADLVLL+VDGSFGFEMETFEFLNMLQ HGFPKVM V++HLD   N K L  TKK+LK RFWTE+Y GAK+F + G IN KY K E+R +
Sbjct:   38 TERHNPRAFSVANIKRTQRNTQRNLDRAQQKEHVPLVDRTEALPPPSLVVVMGPKGCGKSTLIRSLVKYYTRQNLSDVLGPITVVAGKAKRLTFFECPGDDLCAMLDLAKTADLVLLMVDGSFGFEMETFEFLNMLQTHGFPKVMGVMSHLDGLKNNKALGKTKKRLKQRFWTEIYQGAKMFYLSGVINHKYLKGEIRNI 237          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: I2CPB3_NANGC (Ribosome biogenesis protein BMS1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB3_NANGC)

HSP 1 Score: 270 bits (691), Expect = 1.070e-86
Identity = 136/200 (68.00%), Postives = 160/200 (80.00%), Query Frame = 0
Query:    2 VERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECP-DDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
             ERHNPRAFSV N+ +T++  QRNLDRAQ+KE VP VDR E +PPP +VVVMGP+G GK+TLIRSL+K YT  NL +  GPITVV+GK +R+TF ECP DDLC M+DLAK ADLVLL+VDGSFGFEMETFEFLNMLQ HGFPKVM V++HLD   N K L  TKK+LK RFWTE+Y GAK+F + G IN KY K E+R +
Sbjct:   38 TERHNPRAFSVANIKRTQRNTQRNLDRAQQKEHVPLVDRTEALPPPSLVVVMGPKGCGKSTLIRSLVKYYTRQNLSDVLGPITVVAGKAKRLTFFECPGDDLCAMLDLAKTADLVLLMVDGSFGFEMETFEFLNMLQTHGFPKVMGVMSHLDGLKNNKALGKTKKRLKQRFWTEIYQGAKMFYLSGVINHKYLKGEIRNI 237          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A1V9ZFU4_9STRA (Ribosome biogenesis protein BMS1 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFU4_9STRA)

HSP 1 Score: 270 bits (691), Expect = 3.650e-86
Identity = 130/197 (65.99%), Postives = 161/197 (81.73%), Query Frame = 0
Query:    4 RHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            ++NP+AF V+ +GK ++  QRNLD+A +KE VP VDR E+ PPP+ VVVMGP GSGK+TLIRSL+K YT HN+ E  GPITV+SGK+RRITF ECP+DL  M+DLAK+ADLVLL+VD SFGFEMETFEFLN+LQV GFPKVM +LTHLD+F N K+LR TKK+LK RFWTE+Y GAK+F   G ++ KYPK E+  +
Sbjct:   37 KNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPLVDRTEDTPPPITVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPITVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKVMGILTHLDKFKNNKSLRQTKKRLKNRFWTEIYQGAKLFYFSGIVSNKYPKGEINNM 233          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A2P4XFU5_9STRA (Bms1-type G domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XFU5_9STRA)

HSP 1 Score: 268 bits (686), Expect = 6.850e-86
Identity = 134/198 (67.68%), Postives = 158/198 (79.80%), Query Frame = 0
Query:    3 ERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            +R NP+AF V   G+ RK  QRNLDRA RKE VPQ++RAEE+PPP+ VVVMGP GSGK+T+IRSL+K YT HNL E  GP+TVVSGK+RRITF ECP+DL  M+DLAK+ADLVLL+VD SFGFEMETFEFLN+LQV GFPKVM +LTHLD F   K+LR TKK+LK RFWTE+Y GAK+F   G    KYPK E+  +
Sbjct:   40 QRKNPKAFGVAKAGRARKTIQRNLDRAHRKEYVPQLNRAEELPPPISVVVMGPPGSGKSTVIRSLVKRYTRHNLVEVKGPVTVVSGKDRRITFFECPNDLNAMIDLAKIADLVLLLVDASFGFEMETFEFLNILQVVGFPKVMGILTHLDSFKKNKSLRKTKKRLKARFWTEIYQGAKLFYFSGISANKYPKGEIHNL 237          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A8J9SMQ5_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SMQ5_PHATR)

HSP 1 Score: 261 bits (666), Expect = 2.720e-85
Identity = 134/203 (66.01%), Postives = 158/203 (77.83%), Query Frame = 0
Query:    1 KVERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDR-AEEV--PPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            +VERHNPRAFSV N+G+T++  QRN DRAQ+KE VP  DR A EV   PP +VVVMGP G GK+TLIRSL+KLYT + L   TGPITVV+GKN+RITF ECP+D   M+D AK+ADLVLL VD  FGFEMETFEFLN+LQ HGFPKVM + THLD+F   K LR TKK LK RFWTE+Y+GAK+F   G INGKY K E +++
Sbjct:   35 RVERHNPRAFSVANIGRTKRTIQRNADRAQKKEYVPLNDRRAAEVHETPPSLVVVMGPSGVGKSTLIRSLVKLYTNYTLTTVTGPITVVAGKNKRITFMECPNDTAAMLDCAKIADLVLLCVDAKFGFEMETFEFLNILQTHGFPKVMGIFTHLDQFRTAKNLRKTKKLLKHRFWTEIYDGAKMFYFSGVINGKYLKNECKQL 237          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A7S4QGR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QGR5_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.400e-84
Identity = 130/201 (64.68%), Postives = 160/201 (79.60%), Query Frame = 0
Query:    1 KVERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVP-PPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            +VE+HNPRAFSV+N+ +T++  QRNLDR QRKE VP  DR  EV  PP ++VVMGP   GK+TLIRS++K+Y  HNL   TGP+TVV+GKN+R+TF ECP+D   M+DLAKVADLVLL+VD  +GFEMETFEFLNMLQ HGFPKVM V THLD+F  +K LR TKK LK RFWTE+Y+GAK+F   G +NGKY K EV+++
Sbjct:   36 RVEKHNPRAFSVSNIVRTQRTIQRNLDRGQRKEYVPLNDRRSEVDAPPSVIVVMGPPKVGKSTLIRSMVKMYCNHNLSSVTGPVTVVTGKNKRVTFFECPNDTAAMLDLAKVADLVLLMVDAKYGFEMETFEFLNMLQTHGFPKVMGVFTHLDQFKTMKNLRKTKKLLKHRFWTEIYDGAKMFYFSGCVNGKYLKNEVKQL 236          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A7S3YEJ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEJ2_HETAK)

HSP 1 Score: 261 bits (668), Expect = 3.630e-84
Identity = 130/193 (67.36%), Postives = 154/193 (79.79%), Query Frame = 0
Query:    8 RAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            RAFSV+ +GKT+K  QRNLD+AQ+KE  P VDR E++PPPV VVVMGP G GK++LIRSL+KLYT  NL E TGPIT+V  K RR+T  EC +DL  MVDLAK+ADLVLL+VD S+GFEMETFEFLN+LQVHGFPKVM VLTHLD+  N K L  TKK LK RFWTE+Y GAK+F + G +NGKY K E+R +
Sbjct:    1 RAFSVSKIGKTKKNVQRNLDKAQQKEYAPLVDRTEDIPPPVCVVVMGPPGCGKSSLIRSLVKLYTRQNLTEITGPITIVCNKKRRLTLFECTNDLSAMVDLAKIADLVLLMVDASYGFEMETFEFLNILQVHGFPKVMGVLTHLDKMKNNKALSKTKKALKHRFWTEIYQGAKMFYLSGMVNGKYLKNEIRNL 193          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A067C0E8_SAPPC (Bms1-type G domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C0E8_SAPPC)

HSP 1 Score: 273 bits (699), Expect = 2.750e-83
Identity = 132/200 (66.00%), Postives = 164/200 (82.00%), Query Frame = 0
Query:    1 KVERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            K  ++NP+AF V+ +GK ++  QRNLD+A +KE VPQVDR E+ PPPV VVVMGP GSGK+TLIRSL+K YT HN+ E  GP+TV+SGK+RRITF ECP+DL  M+DLAK+ADLVLL+VD SFGFEMETFEFLN+LQV GFPKVM +LTHLD+F N K+LR TKK+LK+RFWTE+Y GAK+F   G ++ KYPK E+  +
Sbjct:   37 KNAKNNPKAFGVSKIGKAKRMTQRNLDKAHQKEYVPQVDRMEDTPPPVSVVVMGPPGSGKSTLIRSLVKRYTRHNIGEIKGPVTVISGKDRRITFFECPNDLNAMIDLAKIADLVLLMVDASFGFEMETFEFLNILQVSGFPKVMGILTHLDKFKNNKSLRQTKKRLKSRFWTEIYQGAKLFYFSGIVSNKYPKGEINNM 236          
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Match: A0A2D4C029_PYTIN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C029_PYTIN)

HSP 1 Score: 271 bits (694), Expect = 5.660e-83
Identity = 135/198 (68.18%), Postives = 157/198 (79.29%), Query Frame = 0
Query:    3 ERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMVVVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPDDLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTHLDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV 200
            +R NP+AF V   GK RK  QRNLDRA RKE VPQV+RAEE PPP+ VVVMGP GSGK+TLIRSL+K YT HN+ E  GP+TV+SGK+RRITF ECP DL  M+DLAK+ADLVLL++D SFGFEMETFEFLN+LQV GFPKVM +LTHLDRF   K+LR TKK+LK RFWTE+Y GAK+F   G    KYPK E+  +
Sbjct:   42 QRKNPKAFGVAKAGKARKQIQRNLDRAHRKEYVPQVNRAEETPPPISVVVMGPPGSGKSTLIRSLVKRYTRHNMVEIKGPVTVISGKDRRITFIECPXDLNAMIDLAKIADLVLLLIDASFGFEMETFEFLNILQVVGFPKVMGILTHLDRFKKNKSLRKTKKRLKNRFWTEIYQGAKLFYFSGITANKYPKGEIHNL 239          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig914.17214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2C7_9PHAE5.900e-12395.50Bms1-type G domain-containing protein n=2 Tax=Ecto... [more]
W7TXR8_9STRA4.770e-8968.00Ribosome biogenesis protein bms1-like protein (Fra... [more]
I2CPB3_NANGC1.070e-8668.00Ribosome biogenesis protein BMS1 (Fragment) n=1 Ta... [more]
A0A1V9ZFU4_9STRA3.650e-8665.99Ribosome biogenesis protein BMS1 (Fragment) n=1 Ta... [more]
A0A2P4XFU5_9STRA6.850e-8667.68Bms1-type G domain-containing protein (Fragment) n... [more]
A0A8J9SMQ5_PHATR2.720e-8566.01Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S4QGR5_9STRA1.400e-8464.68Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S3YEJ2_HETAK3.630e-8467.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067C0E8_SAPPC2.750e-8366.00Bms1-type G domain-containing protein n=1 Tax=Sapr... [more]
A0A2D4C029_PYTIN5.660e-8368.18Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableGENE3D3.40.50.300coord: 47..197
e-value: 1.5E-15
score: 59.1
NoneNo IPR availablePANTHERPTHR12858:SF2RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOGcoord: 3..199
IPR039761Ribosome biogenesis protein Bms1/Tsr1PANTHERPTHR12858RIBOSOME BIOGENESIS PROTEINcoord: 3..199
IPR030387Bms1/Tsr1-type G domainPROSITEPS51714G_BMS1coord: 45..200
score: 9.304
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 42..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig914contigS-dermatodea_contig914:17866..23854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig914.17214.1mRNA_S-dermatodea_contig914.17214.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig914 17866..23854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig914.17214.1 ID=prot_S-dermatodea_contig914.17214.1|Name=mRNA_S-dermatodea_contig914.17214.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=200bp
KVERHNPRAFSVTNLGKTRKAQQRNLDRAQRKEVVPQVDRAEEVPPPVMV
VVMGPRGSGKTTLIRSLIKLYTGHNLKESTGPITVVSGKNRRITFEECPD
DLCGMVDLAKVADLVLLVVDGSFGFEMETFEFLNMLQVHGFPKVMCVLTH
LDRFDNVKTLRATKKKLKTRFWTEVYNGAKVFGMGGEINGKYPKTEVRRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039761Bms1/Tsr1
IPR030387G_Bms1/Tsr1_dom
IPR027417P-loop_NTPase