prot_S-dermatodea_contig91196.17193.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig91196.17193.1
Unique Nameprot_S-dermatodea_contig91196.17193.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length37
Homology
BLAST of mRNA_S-dermatodea_contig91196.17193.1 vs. uniprot
Match: A0A6H5KBQ9_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBQ9_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.190e-6
Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 0
Query:   10 QIYDAFYRLTDPQAQIRSYVYDVVRS 35
            +IYDAFYRLTDP+AQIRSYVYDVVRS
Sbjct:  150 KIYDAFYRLTDPKAQIRSYVYDVVRS 175          
BLAST of mRNA_S-dermatodea_contig91196.17193.1 vs. uniprot
Match: D8LDT1_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT1_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 1.190e-6
Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 0
Query:   10 QIYDAFYRLTDPQAQIRSYVYDVVRS 35
            +IYDAFYRLTDPQAQIRSYV+DVVRS
Sbjct:  191 KIYDAFYRLTDPQAQIRSYVFDVVRS 216          
BLAST of mRNA_S-dermatodea_contig91196.17193.1 vs. uniprot
Match: A0A835YL74_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL74_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.480e-6
Identity = 21/26 (80.77%), Postives = 26/26 (100.00%), Query Frame = 0
Query:   10 QIYDAFYRLTDPQAQIRSYVYDVVRS 35
            ++YDAFYRLTDP++QIRSYVYDV+RS
Sbjct:   82 KVYDAFYRLTDPKSQIRSYVYDVIRS 107          
BLAST of mRNA_S-dermatodea_contig91196.17193.1 vs. uniprot
Match: A0A7S2WGS4_9STRA (Hypothetical protein n=3 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WGS4_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 3.610e-5
Identity = 20/24 (83.33%), Postives = 24/24 (100.00%), Query Frame = 0
Query:   12 YDAFYRLTDPQAQIRSYVYDVVRS 35
            YDA+YRLTDP+AQI+SYVYDV+RS
Sbjct:   86 YDAYYRLTDPEAQIKSYVYDVIRS 109          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig91196.17193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KBQ9_9PHAE1.190e-692.31PHB domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LDT1_ECTSI1.190e-692.31PHB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YL74_9STRA5.480e-680.77Flagellar associated protein n=1 Tax=Tribonema min... [more]
A0A7S2WGS4_9STRA3.610e-583.33Hypothetical protein n=3 Tax=Eucampia antarctica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig91196contigS-dermatodea_contig91196:288..398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig91196.17193.1mRNA_S-dermatodea_contig91196.17193.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig91196 285..398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig91196.17193.1 ID=prot_S-dermatodea_contig91196.17193.1|Name=mRNA_S-dermatodea_contig91196.17193.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=37bp
MVFYRWRRRQIYDAFYRLTDPQAQIRSYVYDVVRSE*
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