prot_S-dermatodea_contig91046.17185.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig91046.17185.1
Unique Nameprot_S-dermatodea_contig91046.17185.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length182
Homology
BLAST of mRNA_S-dermatodea_contig91046.17185.1 vs. uniprot
Match: A0A8F6U2N5_CRASO (DNA polymerase n=1 Tax=Craspedacusta sowerbii TaxID=128124 RepID=A0A8F6U2N5_CRASO)

HSP 1 Score: 60.8 bits (146), Expect = 1.340e-7
Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 0
Query:    1 KNATHYDINSLYTYVMLKTMPVELINRHQSGYLKFGFGLVRVLSVPK-----TFILN-----------FYQK---SGPLVLFSEELKYYQKLGCRFEILESYEFANKI-LFTKFVAHFFFVRKNSGNKLLKTNAKAILNSLYGKFATKTN 130
            K    +DINSLY + ML  +PV      ++  L+  FG V V S+ K     + I N           + +K   S P++LFSEE KY QKLG   +I    E+ +   +F KF+ +F+ ++K S +     +AK I+NSLYG+   + N
Sbjct:  231 KGVLGFDINSLYPFCMLNKLPVGEPKFKKNVILEDFFGFVYVKSLKKLSRGASVIGNNSNHSLPPSAPYEEKLLSSTPMILFSEEAKYAQKLGYLIDIRWGIEYESSFSVFHKFINYFYNLKK-SHHSTNSISAKLIMNSLYGRLGMRKN 379          
BLAST of mRNA_S-dermatodea_contig91046.17185.1 vs. uniprot
Match: A0A8F1N7G4_CRASO (DNA-directed DNA polymerase n=1 Tax=Craspedacusta sowerbii TaxID=128124 RepID=A0A8F1N7G4_CRASO)

HSP 1 Score: 57.0 bits (136), Expect = 2.810e-6
Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = 0
Query:    6 YDINSLYTYVMLKTMPVELINRHQSGYLKFGFGLVRVLSVPK-----TFILN-----------FYQK---SGPLVLFSEELKYYQKLGCRFEILESYEFANKI-LFTKFVAHFFFVRKNSGNKLLKTNAKAILNSLYGKFATKTN 130
            +D+NSLY   ML  +PV      ++  L+  FG V V S+ +     + I N           + +K   S P++LFSEE KY QKLG   E+    E+ +   +F KF+ +F+ ++K S + +   +AK I+NSLYG+   + N
Sbjct:  242 FDVNSLYPSCMLNRLPVGEPKFKKTIILEDFFGFVYVKSLKRANRGPSVIGNDSDYPVAASPPYEEKLLSSTPMILFSEEAKYAQKLGYLVEVGWGIEYESSFSVFHKFINYFYNLKK-SHHSMNSISAKLIMNSLYGRLGMRKN 385          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig91046.17185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A8F6U2N5_CRASO1.340e-734.00DNA polymerase n=1 Tax=Craspedacusta sowerbii TaxI... [more]
A0A8F1N7G4_CRASO2.810e-633.10DNA-directed DNA polymerase n=1 Tax=Craspedacusta ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006172DNA-directed DNA polymerase, family BPRINTSPR00106DNAPOLBcoord: 3..16
score: 34.22
coord: 158..166
score: 57.21
coord: 111..123
score: 41.33
IPR004868DNA-directed DNA polymerase, family B, mitochondria/virusPFAMPF03175DNA_pol_B_2coord: 60..131
e-value: 1.3E-13
score: 50.6
NoneNo IPR availableGENE3D1.10.287.690coord: 91..127
e-value: 2.8E-5
score: 25.6
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig91046contigS-dermatodea_contig91046:51..596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig91046.17185.1mRNA_S-dermatodea_contig91046.17185.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig91046 51..596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig91046.17185.1 ID=prot_S-dermatodea_contig91046.17185.1|Name=mRNA_S-dermatodea_contig91046.17185.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=182bp
KNATHYDINSLYTYVMLKTMPVELINRHQSGYLKFGFGLVRVLSVPKTFI
LNFYQKSGPLVLFSEELKYYQKLGCRFEILESYEFANKILFTKFVAHFFF
VRKNSGNKLLKTNAKAILNSLYGKFATKTNRRNLLQLSLAINSYAKVEIF
QYRVRSEFCYSDTDSIVYLIPLANRYISRDIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006172DNA-dir_DNA_pol_B
IPR004868DNA-dir_DNA_pol_B_mt/vir