prot_S-dermatodea_contig9084.17163.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9084.17163.1
Unique Nameprot_S-dermatodea_contig9084.17163.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length64
Homology
BLAST of mRNA_S-dermatodea_contig9084.17163.1 vs. uniprot
Match: D7FYK4_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYK4_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 6.510e-13
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 GKKFLTSWETIMHQGNSMLASMFKGAFKCATDEDGFAFIDRDGKQLCILLRYCK 54
            GKKFLTS  TIM  GN MLASMF+G F   TDE+GFAFIDRDG++   +L + +
Sbjct:   39 GKKFLTSRSTIMQAGNCMLASMFRGKFNMETDEEGFAFIDRDGERFRHVLNFLR 92          
BLAST of mRNA_S-dermatodea_contig9084.17163.1 vs. uniprot
Match: R1CKZ4_EMIHU (Peptidylprolyl isomerase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CKZ4_EMIHU)

HSP 1 Score: 54.7 bits (130), Expect = 4.270e-7
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    1 GKKFLTSWETIMHQGNSMLASMFKGAFKCATDEDGFAFIDRDGKQLCILLRYCKSGRYDKVTAT 64
            G KF T+  T+     SML +MF G  +   D++G+ FIDRDGKQ   +L + ++G  D  ++T
Sbjct:   56 GSKFETTLTTLTRYPESMLGAMFSGRHEVPPDDEGYVFIDRDGKQFGTILNFLRTGTLDVPSST 119          
BLAST of mRNA_S-dermatodea_contig9084.17163.1 vs. uniprot
Match: A0A7S3THN5_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3THN5_EMIHU)

HSP 1 Score: 52.4 bits (124), Expect = 2.820e-6
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 GKKFLTSWETIMHQGNSMLASMFKGAFKCATDEDGFAFIDRDGKQLCILLRYCKSG 56
            G +F TS  T+  +  SMLA+MF G  + ATDEDG+ FIDRDG+    +L + ++G
Sbjct:   88 GHRFTTSRTTLCAR-ESMLATMFSGRHQIATDEDGYTFIDRDGRNFHHILNFLRTG 142          
BLAST of mRNA_S-dermatodea_contig9084.17163.1 vs. uniprot
Match: A0A6C0E9D9_9ZZZZ (BTB domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E9D9_9ZZZZ)

HSP 1 Score: 50.4 bits (119), Expect = 1.110e-5
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    1 GKKFLTSWETIMHQGNSMLASMFKGAFKCATDEDGFAFIDRDGKQLCILLRYCKSGR 57
            G  F T+ +T+    +SMLASMF G     TDE+G+ FIDRDGK    +L++ +  +
Sbjct:   11 GVLFQTTQDTLTKDSDSMLASMFSGRHPLKTDENGYHFIDRDGKLFEYILKFLRDDK 67          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9084.17163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FYK4_ECTSI6.510e-1361.11BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
R1CKZ4_EMIHU4.270e-739.06Peptidylprolyl isomerase n=1 Tax=Emiliania huxleyi... [more]
A0A7S3THN5_EMIHU2.820e-646.43Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
A0A6C0E9D9_9ZZZZ1.110e-542.11BTB domain-containing protein n=1 Tax=viral metage... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 1..57
e-value: 6.7E-6
score: 26.4
NoneNo IPR availableGENE3D3.30.710.20coord: 1..63
e-value: 3.3E-12
score: 48.2
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9084contigS-dermatodea_contig9084:8444..8635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9084.17163.1mRNA_S-dermatodea_contig9084.17163.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9084 8444..8635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9084.17163.1 ID=prot_S-dermatodea_contig9084.17163.1|Name=mRNA_S-dermatodea_contig9084.17163.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=64bp
GKKFLTSWETIMHQGNSMLASMFKGAFKCATDEDGFAFIDRDGKQLCILL
RYCKSGRYDKVTAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003131T1-type_BTB
IPR011333SKP1/BTB/POZ_sf