prot_S-dermatodea_contig9074.17157.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9074.17157.1
Unique Nameprot_S-dermatodea_contig9074.17157.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length180
Homology
BLAST of mRNA_S-dermatodea_contig9074.17157.1 vs. uniprot
Match: A0A6H5L5N1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N1_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 6.010e-29
Identity = 96/191 (50.26%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    1 RKRTSKAIASALAEVTKAERAAETEIVKHQLRNTPALSDSSEDGSKDTARGK-WIVHTGRTSSKRDLRKAKVGRAAVP--APAWVQDFHKMKEQESWASV--ICHDDSAAPASAQATAKP-----REGRTTVSAVLAAAASTP--PPSPG--REGDTA-----IDDEWVVRKLAQIRRRSRSIDSAIGDFA 172
            R+RTS+A+  ALAEV KAERAA+ E V+HQLR+   L D+  DG     RGK W  HT         R+AKVGRA  P  +PAW +DFH+MK + SWAS   I  +    P   +   +P     R G T VSAVLAA A +P  PPS    R+G T      +DD+WVVRK AQIRRRSRSIDSAIGD +
Sbjct:   66 RERTSQAMERALAEVVKAERAAKAETVRHQLRD---LQDNENDGQDH--RGKDWTPHTRVGHRNSWARQAKVGRATGPIRSPAWAKDFHEMKRRASWASALEITMEYEVPPILPEVPLEPPPVPVRRG-TIVSAVLAAVAESPSSPPSTSSERKGKTGNSGPVLDDDWVVRKFAQIRRRSRSIDSAIGDIS 250          
BLAST of mRNA_S-dermatodea_contig9074.17157.1 vs. uniprot
Match: D8LTM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM9_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 8.170e-29
Identity = 96/199 (48.24%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    1 RKRTSKAIASALAEVTKAERAAETEIVKHQLRNTPALSDSSEDGSKDTARGK-WIVHTGRTSSKRDLRKAKVGRAA--VPAPAWVQDFHKMKEQESWASVI--CHDDSAAPASAQATAKP-----REGRTTVSAVLAAAASTP--PPSPGREGD-------TAIDDEWVVRKLAQIRRRSRSIDSAIGDFATLSPVIKP 180
            R+RTS+A+  ALAEV KA RAA+ E V+HQLR+   L D+ +DG  D  RGK W  HT         RKAKVGRA   V  PAW +DFH+MK + SWAS +    +D   P   +   +P     R G T VSAVLAA A +P  PPS   E +         +DD+WVVRK AQIRRRSR IDSAIGD + L    +P
Sbjct:   66 RERTSQAMERALAEVIKAGRAAQAETVRHQLRD---LHDNEKDGQDD--RGKAWTPHTRVGHRNSWDRKAKVGRATGLVRPPAWAKDFHEMKRRVSWASALESTIEDEVPPFLPEVPLEPPPAPVRRG-TIVSAVLAAVAESPSSPPSTSSERNGTMGNSGPVLDDDWVVRKFAQIRRRSRGIDSAIGDISGLHKQAQP 258          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9074.17157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5N1_9PHAE6.010e-2950.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTM9_ECTSI8.170e-2948.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9074contigS-dermatodea_contig9074:767..2196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9074.17157.1mRNA_S-dermatodea_contig9074.17157.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9074 767..2196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9074.17157.1 ID=prot_S-dermatodea_contig9074.17157.1|Name=mRNA_S-dermatodea_contig9074.17157.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=180bp
RKRTSKAIASALAEVTKAERAAETEIVKHQLRNTPALSDSSEDGSKDTAR
GKWIVHTGRTSSKRDLRKAKVGRAAVPAPAWVQDFHKMKEQESWASVICH
DDSAAPASAQATAKPREGRTTVSAVLAAAASTPPPSPGREGDTAIDDEWV
VRKLAQIRRRSRSIDSAIGDFATLSPVIKP
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