prot_S-dermatodea_contig90688.17151.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90688.17151.1
Unique Nameprot_S-dermatodea_contig90688.17151.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length60
Homology
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BLAST of mRNA_S-dermatodea_contig90688.17151.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 4.790e-12
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0 
Query:    3 IAAQVAQFAGQSEQKVLVFSVTLTAGERNAVHRLAAGAGLAHESKGQDPDRALHVWK 59
            IAAQV +FA QSE + LVF   L+A ERNA H LAAG GL HES+G + +RALH+WK
Sbjct:  757 IAAQVREFA-QSEDRELVFPSGLSARERNAAHSLAAGEGLGHESRGDEGNRALHLWK 812
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90688.17151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4Q3_9PHAE4.790e-1263.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 1..60
e-value: 2.8E-13
score: 51.4
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 2..59
IPR001374R3H domainPFAMPF01424R3Hcoord: 1..59
e-value: 1.1E-11
score: 44.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90688contigS-dermatodea_contig90688:349..528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90688.17151.1mRNA_S-dermatodea_contig90688.17151.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90688 349..528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90688.17151.1 ID=prot_S-dermatodea_contig90688.17151.1|Name=mRNA_S-dermatodea_contig90688.17151.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=60bp
LQIAAQVAQFAGQSEQKVLVFSVTLTAGERNAVHRLAAGAGLAHESKGQD
PDRALHVWKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036867R3H_dom_sf
IPR001374R3H_dom