prot_S-dermatodea_contig905.17129.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig905.17129.1
Unique Nameprot_S-dermatodea_contig905.17129.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length245
Homology
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A6H5LBY7_9PHAE (Fe/B12 periplasmic-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBY7_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 5.420e-120
Identity = 177/250 (70.80%), Postives = 203/250 (81.20%), Query Frame = 0
Query:    1 MVLSTCARILGDNPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSD---------------AAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWRHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDAVGDAIGQEIAPRDSWTIISEPQPTE 235
            MVLSTCAR+LGDNPRIVSIEPGSVAEVIDSVRLVGRETGF +EG AEARRLE GF+KIR+VVA++E+  A                     A G   +   K++KVAFLEWLEPLFNGGHW+PD+VRAAG EYTMAEPGNKS+G++ +EL  YDADI+LVAPCGMD+ RA SDGE+MWRH WWR+LRAVKDG+VY LDGNAYYARPGPRLLQG G+IARLLHGDA GDAIG++IAPRDSW II+ P P +
Sbjct:  113 MVLSTCARVLGDNPRIVSIEPGSVAEVIDSVRLVGRETGFAEEGIAEARRLEAGFDKIRSVVAKLESTLATAXXXXXXXXXXXXXXGVVGVAPGGASSVP-KKQKVAFLEWLEPLFNGGHWVPDLVRAAGGEYTMAEPGNKSMGMSAKELMDYDADIILVAPCGMDRNRAKSDGEQMWRHDWWRELRAVKDGKVYALDGNAYYARPGPRLLQGCGIIARLLHGDAAGDAIGEDIAPRDSWFIITAPAPAQ 361          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A835YMX1_9STRA (Periplasmic binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX1_9STRA)

HSP 1 Score: 235 bits (599), Expect = 5.350e-73
Identity = 114/231 (49.35%), Postives = 153/231 (66.23%), Query Frame = 0
Query:    1 MVLSTCARILGDNPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWRHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDAVGDAIGQEIAPRDSWTIISEP 231
            +V+  CAR+LGD+PR++SIEP  +++VI SVR VGRE G  +E +  AR LE GF KI+A V  +                   S   +    L   +PLFNGGHW+PD++  AGA+Y +A+   +S+ +TPE L A D DI+LVAPCG D  RA  D + +W+H WW +LRAV+DG+VY +DGNAYYARPGPRLLQG G+IARL+HG +VG  +G+E+APR  W  +  P
Sbjct:  109 IVVGVCARVLGDHPRVISIEPTCLSDVIASVRTVGRECGAEEEADEVARGLEAGFEKIKAAVKGLP-------------RPKPSSCNVRDSCNLLLADPLFNGGHWVPDLLDIAGADYRLAKTKERSIQITPETLAASDPDIILVAPCGFDSTRAHDDAQHLWQHDWWTQLRAVRDGKVYAMDGNAYYARPGPRLLQGCGIIARLIHGKSVGQTLGEELAPRH-WKQVQAP 325          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A7S4KA17_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KA17_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.070e-47
Identity = 93/245 (37.96%), Postives = 138/245 (56.33%), Query Frame = 0
Query:    1 MVLSTCARILGD---------------NPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTM-AEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWR-HAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDAVGDAIGQEIAPRDSWTII 228
            +V+  CA++LG                NP+++S+EP ++ E + +  +     G  D     ARR EE  + IRA +  +         +AA+G        R +VAFLEW +P+F GGHWIPDM+  AGAEY    + G +SVG+  E    +D D +L+ PCG   ER   D  ++ R   WW+++ AV++G VY LDGN+YYARPGPRLLQGTG++A  +HG+     +G+E+ P + +  I
Sbjct:  139 VVIDACAKLLGGGEXXXXXXXXDGERLNPKVISMEPTTLKETLRTFHVAAEAVGLTDA----ARRAEEITSHIRAGLETIR--------NAADGR------PRPRVAFLEWHDPIFAGGHWIPDMLDMAGAEYVFPVKSGERSVGVADEHFVEFDPDFILIGPCGFGLERTVKDTLQLARTKPWWKEMSAVREGNVYALDGNSYYARPGPRLLQGTGIMAACIHGEETAKELGEELCPTEGYCQI 365          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A7R9WK88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WK88_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.870e-44
Identity = 90/216 (41.67%), Postives = 129/216 (59.72%), Query Frame = 0
Query:    1 MVLSTCARIL-------GDNPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSY-KRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWRHA----WWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIAR 204
            +V +TCARI         D  +IVS+EP S+ +V +++R+ GR  G     EA+A  +  G+ K    V  +            EG    +++ K+ KVAFLEW EP   GGHWI DM+  AG  YT+ + G +S  +T E+L  Y+ D++L+ PCG   ERAT+D   +  H+     W+ LRAV+D +V+ LDGN+YYARPGPRL+QGTGL+A+
Sbjct:   92 LVNNTCARIFPTKQEDGSDKTKIVSLEPQSLNDVWETIRVAGRVLGV----EAKAEEMIGGYVKDLQEVQTI-----------VEGYLKTNAHIKKPKVAFLEWHEPFVTGGHWIADMMEIAGGRYTLNKTGCRSECITDEQLVQYNPDVILIGPCGFSVERATNDTLPLLNHSKRGPLWKNLRAVQDEKVFALDGNSYYARPGPRLVQGTGLMAK 292          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A7S2T5Q4_9CHLO (Hypothetical protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T5Q4_9CHLO)

HSP 1 Score: 156 bits (395), Expect = 1.300e-42
Identity = 85/220 (38.64%), Postives = 124/220 (56.36%), Query Frame = 0
Query:    2 VLSTCARILGDNP-RIVSIEPGSVAEVIDSVRLVGRET----GFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMW------RHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDA 210
            V S C+R+L D+P +++S+EP ++ +V DS+++VG         IDE  A   R +EG   +R  V     R                  +R KVA LEW +PLF GGHWI +MV  AG  Y +  PG +S  +T  +L AYD D++++APCG D +R   D +K+          WW  LRAV++ +VY  DGN Y++RP PRL++G  ++A +LHG A
Sbjct:  118 VKSKCSRLLADDPYKLLSVEPQTLRDVRDSIQVVGASLDCSRAAIDEALA---RFDEGRASVRERVHRRLDR------------------RRPKVALLEWFDPLFTGGHWIHEMVEDAGGSYGLTRPGERSAVMTRSDLAAYDPDVIVLAPCGFDLDRCERDAKKILYDPEGEHFEWWSGLRAVRESEVYACDGNQYFSRPSPRLVEGIEILAEVLHGVA 316          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A812QZJ7_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QZJ7_SYMMI)

HSP 1 Score: 148 bits (374), Expect = 5.890e-41
Identity = 71/159 (44.65%), Postives = 94/159 (59.12%), Query Frame = 0
Query:   90 KVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWRHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDAVG-----DAIGQEIAPRDSWTIISEPQPTEAPGIVAPP 243
            +   LEW +PLF+GGHWIP+M+ AAG+E     PGNKS  + P  LT YD D +LVA CG D  R   D +K+W   WW  LR VK+G+V+  DGN Y+ARPGP L+ G  ++AR++H D  G     +A G   A   +W  + EP    A G+   P
Sbjct:   30 RCVLLEWADPLFDGGHWIPEMLVAAGSEEGWQSPGNKSKKIEPSVLTDYDPDCILVACCGFDLHRNLEDAQKLWSKPWWTSLRCVKEGKVFAADGNRYFARPGPSLVAGVAIMARIIHDDVPGVVSAVEATGLLPAEGVAWGRV-EPPGLPASGVPGQP 187          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A7S4V8M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V8M0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 6.420e-40
Identity = 83/266 (31.20%), Postives = 133/266 (50.00%), Query Frame = 0
Query:    1 MVLSTCARILGD--------------------------------NPRIVSIEPGSVAEVIDSVRLVGRETG---FIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTM-AEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMW-RHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDAVGDAIGQEIAPRDSWTIIS 229
            +VLSTCA++LG                                 +P+++S+EP ++ + +D+  +  +  G    I         +E G N+IR  V                        K+ +VAF+EW +P+F GGHWI DM+  A  +Y M  E   +S+ ++ E+    D D++L+ PCG D  R   D  +++    WW  LRAVK+G+V+  D N+YYARPGPRLLQGTG++A  +HGD + D++ +++ P   +  I+
Sbjct:   95 VVLSTCAKLLGGPKANVEESDEKGVVEKGSSSCHLSLKDTTTGLDPKVISMEPENLKDTLDTFHVAAKAIGSPEVIKRANEVTSSIESGLNRIRQAV---------------------KGCKKPRVAFIEWHDPIFCGGHWIVDMLDIARGDYVMPVEYAGRSIAMSNEDFIKLDPDVILIGPCGFDLARTVKDTIEIFGTKDWWLNLRAVKEGRVFAADANSYYARPGPRLLQGTGIMAAAMHGDNIMDSLDEDLVPASGYCQIT 339          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: UPI001C5D4500 (cobalamin-binding protein n=1 Tax=Nonomuraea guangzhouensis TaxID=1291555 RepID=UPI001C5D4500)

HSP 1 Score: 144 bits (362), Expect = 4.760e-38
Identity = 72/210 (34.29%), Postives = 115/210 (54.76%), Query Frame = 0
Query:    3 LSTCARILGDNPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWRHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDAVG 212
            +S   R+L   PR++S+EP ++ EV+ S+  +G   G  D        LE+    +R++VA+                       R +VA +EWL+PL+  GHW+P+ +RAAG E  +AE G  +  +  E + A   +++L+ PCG   ER   +   + R+  W  L AV+ GQV+ LDG AY+ RPGPR+++G  ++A++LHG  VG
Sbjct:  104 VSRAVRLLDSGPRVISLEPRTLPEVLRSIEHLGEALGAADAASRRVAELEDRLAAVRSMVADR---------------------PRPRVAAIEWLDPLWPAGHWVPEQIRAAGGEPLLAEAGEHTTAIDWETVRASQPEVILLMPCGFPPERTQEEWRLLTRYPGWADLPAVRAGQVWVLDGPAYFNRPGPRVVRGVEVLAQVLHGVHVG 292          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: A0A3D1U2S2_9CHLR (Cobalamin-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D1U2S2_9CHLR)

HSP 1 Score: 142 bits (358), Expect = 2.460e-37
Identity = 79/202 (39.11%), Postives = 113/202 (55.94%), Query Frame = 0
Query:    8 RILGDNPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWRHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGD 209
            R L   PR+VS+EP S+ EV+DS+ LVGR TG  D        L +  NK+R +V               +GS+        +V  LEW +P+F GGHW+P+MV  AG    +   G  S  +T   + + D D+V+  PCG D ER+T +  +      W +LRAV+ G+VY +DG+AY+ RPGPRL+ G  ++AR+LH D
Sbjct:  111 RSLRVPPRMVSLEPTSLNEVLDSILLVGRLTGAEDVALKVVAALRDRLNKVRELV---------------KGSEVV------RVLTLEWTDPVFAGGHWLPEMVEVAGGHDVLGIAGRPSEQITWPSVLSSDPDVVIAMPCGFDLERSTLEMRRTTFPDEWYELRAVRSGRVYVVDGSAYFNRPGPRLVDGVEIVARILHSD 291          
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Match: UPI00145D33BE (cobalamin-binding protein n=1 Tax=Streptomyces sp. HNM0575 TaxID=2716338 RepID=UPI00145D33BE)

HSP 1 Score: 141 bits (356), Expect = 3.860e-37
Identity = 74/208 (35.58%), Postives = 116/208 (55.77%), Query Frame = 0
Query:    8 RILGDNPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARRLEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPLFNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGMDKERATSDGEKMWRHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTGLIARLLHGDAVGDAI 215
            R L   P ++S+EP ++++V+D V  VG E G    G   A  L +   ++R  VA +                      R KVA +EWL+PL+  GHW+P+ +RAAG E  +AEPG  +  +  E + A   +++L+ PCG+  ER  S+ E + R   W +L AV+ G+V+ +DG AY+ RPGPR+++G  ++A +LHG   GD +
Sbjct:  109 RSLESGPTMLSLEPRTLSDVLDCVERVGGELGVPLVGSRRAAELRDRLERVRKSVAGL---------------------ARPKVAAIEWLDPLWPAGHWVPEQIRAAGGEALLAEPGEHTEPVDWETVRAAQPEVMLLMPCGLAPERTESERELLTRLPGWAELPAVRAGRVWVVDGPAYFNRPGPRVVRGAEVLAHVLHGVTAGDEV 295          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig905.17129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBY7_9PHAE5.420e-12070.80Fe/B12 periplasmic-binding domain-containing prote... [more]
A0A835YMX1_9STRA5.350e-7349.35Periplasmic binding protein n=1 Tax=Tribonema minu... [more]
A0A7S4KA17_9STRA2.070e-4737.96Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9WK88_9STRA2.870e-4441.67Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2T5Q4_9CHLO1.300e-4238.64Hypothetical protein n=2 Tax=Chloropicon primus Ta... [more]
A0A812QZJ7_SYMMI5.890e-4144.65Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S4V8M0_9STRA6.420e-4031.20Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
UPI001C5D45004.760e-3834.29cobalamin-binding protein n=1 Tax=Nonomuraea guang... [more]
A0A3D1U2S2_9CHLR2.460e-3739.11Cobalamin-binding protein n=1 Tax=Chloroflexi bact... [more]
UPI00145D33BE3.860e-3735.58cobalamin-binding protein n=1 Tax=Streptomyces sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1980coord: 77..207
e-value: 1.0E-18
score: 69.4
NoneNo IPR availablePANTHERPTHR42860FAMILY NOT NAMEDcoord: 10..216
NoneNo IPR availablePANTHERPTHR42860:SF1VITAMIN B12-BINDING PROTEINcoord: 10..216
NoneNo IPR availableSUPERFAMILY53807"Helical backbone" metal receptorcoord: 13..209
IPR002491ABC transporter periplasmic binding domainPFAMPF01497Peripla_BP_2coord: 59..184
e-value: 1.9E-11
score: 44.0
IPR002491ABC transporter periplasmic binding domainPROSITEPS50983FE_B12_PBPcoord: 1..210
score: 10.183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig905contigS-dermatodea_contig905:336..2906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig905.17129.1mRNA_S-dermatodea_contig905.17129.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig905 302..3399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig905.17129.1 ID=prot_S-dermatodea_contig905.17129.1|Name=mRNA_S-dermatodea_contig905.17129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=245bp
MVLSTCARILGDNPRIVSIEPGSVAEVIDSVRLVGRETGFIDEGEAEARR
LEEGFNKIRAVVAEMEARSAAEQSDAAEGSKDAHSYKRKKVAFLEWLEPL
FNGGHWIPDMVRAAGAEYTMAEPGNKSVGLTPEELTAYDADIVLVAPCGM
DKERATSDGEKMWRHAWWRKLRAVKDGQVYGLDGNAYYARPGPRLLQGTG
LIARLLHGDAVGDAIGQEIAPRDSWTIISEPQPTEAPGIVAPPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002491ABC_transptr_periplasmic_BD