prot_S-dermatodea_contig90473.17128.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90473.17128.1
Unique Nameprot_S-dermatodea_contig90473.17128.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length104
Homology
BLAST of mRNA_S-dermatodea_contig90473.17128.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.830e-19
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    7 CNTPEFEEPGLTLGLCTWKLDENGDLVLGYHHTHRSDKHPVCVVGGTVPAIQVGKEWLVARFALRYIKEGRIVSRVANNKRHNGADKRYRKK 98
            C  P F E G+T G  TW+LDE+  L+L  H  ++++ HP C +GG VP  +V + W +  +AL+YI   RIVS+V  N RHNGA ++ R K
Sbjct:  504 CEIPNFSEAGVTKGESTWQLDEHDYLILPVHSGNKTEGHPACTIGGCVPVEKVNESWRLCHWALKYILNRRIVSKVTQNARHNGAGEKSRAK 595          
BLAST of mRNA_S-dermatodea_contig90473.17128.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.170e-17
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    7 CNTPEFEEPGLTLGLCTWKLDENGDLVLGYHHTHRSDKHPVCVVGGTVPAIQVGKEWLVARFALRYIKEGRIVSRVANNKRHNGADKRYRKK 98
            C  P F E G+T G  TW+LDE+ +L+L  H +  ++ HP C +GG VP  +V + W +  +AL+YI   RIV R++ ++RHNGA  + R K
Sbjct:  459 CEIPNFSEAGVTKGKSTWQLDEHDNLILPVHSSIETEGHPRCQLGGCVPVEKVNESWRLCHWALKYILARRIVQRISQSQRHNGAPAKSRAK 550          
BLAST of mRNA_S-dermatodea_contig90473.17128.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.370e-15
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    7 CNTPEFEEPGLTLGLCTWKLDENGDLVLGYHHTHRSDKHPVCVVGGTVPAIQVGKEWLVARFALRYIKEGRIVSRVANNKRHNGA-DKRYRKKK 99
            C TP F E G+T G   W+ DE+  L+L  H   R+D HP  V+GG V   +V + W +  + L+YI   RIV ++  N+RHNGA +K Y K++
Sbjct:  290 CETPNFSEAGVTEGKSKWEHDEHDKLILPVHSGIRTDGHPRYVIGGCVSVEKVNESWRLCHWVLKYILARRIVPKITQNQRHNGAPEKSYAKRR 383          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90473.17128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L5E5_9PHAE2.830e-1944.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWV7_ECTSI1.170e-1742.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7M5_9PHAE2.370e-1541.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90473contigS-dermatodea_contig90473:23..334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90473.17128.1mRNA_S-dermatodea_contig90473.17128.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90473 2..420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90473.17128.1 ID=prot_S-dermatodea_contig90473.17128.1|Name=mRNA_S-dermatodea_contig90473.17128.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=104bp
MQGVSLCNTPEFEEPGLTLGLCTWKLDENGDLVLGYHHTHRSDKHPVCVV
GGTVPAIQVGKEWLVARFALRYIKEGRIVSRVANNKRHNGADKRYRKKKL
TKN*
back to top