prot_S-dermatodea_contig9038.17118.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9038.17118.1
Unique Nameprot_S-dermatodea_contig9038.17118.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length199
Homology
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BLAST of mRNA_S-dermatodea_contig9038.17118.1 vs. uniprot
Match: D7G0T3_ECTSI (Retinoblastoma binding protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T3_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 4.290e-36
Identity = 84/129 (65.12%), Postives = 95/129 (73.64%), Query Frame = 0 
Query:    1 QELEENVDYVEKEDEFDVVIDARDPEGRKRKAEKEXXXXE-AVVSIEAIDTVGAWSTDSEGEDKGKLFYLSTEPGAAAREGWYDLEVQTSKGSSAATKPRGGAPDHKKKEKKGESVKGEDIREEWTSVR 128
            +ELEENV+YVEKEDEFDVV++  DPEG KRKAEKE    E AVVSI+AIDTV AWSTDSEGED+ + FYLSTEPGAAAREGWYDL+VQTSK    ++KP GG  + K               EEWTSVR
Sbjct:  368 EELEENVEYVEKEDEFDVVVEEGDPEGTKRKAEKEKQQEEEAVVSIDAIDTVDAWSTDSEGEDRLQPFYLSTEPGAAAREGWYDLDVQTSK-RGISSKPGGGRWEDK---------------EEWTSVR 480
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BLAST of mRNA_S-dermatodea_contig9038.17118.1 vs. uniprot
Match: A0A6H5KX51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX51_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.780e-35
Identity = 86/129 (66.67%), Postives = 97/129 (75.19%), Query Frame = 0 
Query:    1 QELEENVDYVEKEDEFDVVIDARDPEGRKRKAEKEXXXXE-AVVSIEAIDTVGAWSTDSEGEDKGKLFYLSTEPGAAAREGWYDLEVQTSKGSSAATKPRGGAPDHKKKEKKGESVKGEDIREEWTSVR 128
            +ELEENV+YVEKEDEFDVV++  DPEG KRKAEKE XXX  AVVSI+AIDTV AWSTDSEGED+ + FYLSTEPGAAAREGWYDL+VQTSK    ++KP GG  + K               EEWTSVR
Sbjct:  240 EELEENVEYVEKEDEFDVVVEEGDPEGTKRKAEKEKXXXXXAVVSIDAIDTVDAWSTDSEGEDRLQPFYLSTEPGAAAREGWYDLDVQTSK-RGISSKPGGGRWEDK---------------EEWTSVR 352
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9038.17118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0T3_ECTSI4.290e-3665.12Retinoblastoma binding protein 5 n=1 Tax=Ectocarpu... [more]
A0A6H5KX51_9PHAE2.780e-3566.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9038contigS-dermatodea_contig9038:138..1574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9038.17118.1mRNA_S-dermatodea_contig9038.17118.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9038 138..1574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9038.17118.1 ID=prot_S-dermatodea_contig9038.17118.1|Name=mRNA_S-dermatodea_contig9038.17118.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=199bp
QELEENVDYVEKEDEFDVVIDARDPEGRKRKAEKEQEEEEAVVSIEAIDT
VGAWSTDSEGEDKGKLFYLSTEPGAAAREGWYDLEVQTSKGSSAATKPRG
GAPDHKKKEKKGESVKGEDIREEWTSVRLARVPDEDSGNDGAGGGGSPRP
SPRPRATASRTPSRSGARRRQREGGQGSQQQDRAPEGEGRRPAARLRRQ
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