prot_S-dermatodea_contig9027.17110.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9027.17110.1
Unique Name	prot_S-dermatodea_contig9027.17110.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	185

Homology

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 1.220e-107
Identity = 156/180 (86.67%), Postives = 167/180 (92.78%), Query Frame = 0

Query:    6 AEGKTEGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
            +E KTEG DH  D DED LEDPDLKVILLGDSAVGKSKLVER+LMDEYNPRQLSTFALTLFRKNA L+DG + KV DFWDTAGQERFSSMHPSYYYRAHAC++VFDVTRKATYKNL++WYGELRQY E IPCLL+ANKIDVDY VTKKSFKFAQQHDLPFFFVSAADGTNVVKAF+EA+K
Sbjct:    2 SERKTEGKDHMEDGDED-LEDPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKV-DFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANKIDVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFDEAVK 179

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.040e-100
Identity = 143/167 (85.63%), Postives = 155/167 (92.81%), Query Frame = 0

Query:   19 VDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
             D DDL DPDLKVILLGDSAVGKSKLVER+LMDEY+PRQLSTFALTLFRKNA LEDGT+T V DFWDTAGQERF+SMHPSYYYRAHAC++VFDVTRKATYKNL +WYGELRQ+CE IPC+LVANKIDVDYNVTKK FKFA QH+LPFFFVSAADG NVV+ FEEAI+
Sbjct:   10 ADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTV-DFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIR 175

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A125SEA6_9STRA (RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A125SEA6_9STRA)

HSP 1 Score: 278 bits (710), Expect = 9.480e-93
Identity = 137/187 (73.26%), Postives = 158/187 (84.49%), Query Frame = 0

Query:    1 MSEGKAEGKT--EGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
            +SEGK EGKT  EG ++   VD   L DPD K+ILLGDSAVGKSKLVER+LMDEYNPRQLST+ALTL+RK   LE+G    + D WDTAGQERF+S+HPSYYY AH C+LVFDVTRK TY++L++WYGELRQYCE IPC+LVANKIDVDY VTKKSFKFA Q++LPFFFVSAADGTNVVK F EA++
Sbjct:    7 LSEGKDEGKTANEGDNNNNGVD---LGDPDCKIILLGDSAVGKSKLVERYLMDEYNPRQLSTYALTLYRKTVVLEEGNTYDI-DLWDTAGQERFNSLHPSYYYGAHCCILVFDVTRKVTYQHLSDWYGELRQYCESIPCILVANKIDVDYKVTKKSFKFASQYELPFFFVSAADGTNVVKVFHEAVR 189

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: H3GJM6_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GJM6_PHYRM)

HSP 1 Score: 257 bits (656), Expect = 1.150e-84
Identity = 127/170 (74.71%), Postives = 143/170 (84.12%), Query Frame = 0

Query:   18 DVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATL--EDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
            +V ED L +PD+KVILLGDSAVGKSKLVERF+M+EY PRQLSTFALTLFRK   L  E+G +T   DFWDTAGQERFSSMHPSYYY A AC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD NVT K FKFA+ H+L F FVSAADGTNVVK F++A++
Sbjct:    7 EVLEDSLGEPDVKVILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEVELDGENGKRTVKVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLANWYKELREYCESIPCFLVANKIDVDMNVTNKKFKFAETHNLEFSFVSAADGTNVVKVFKDAVE 176

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN)

HSP 1 Score: 256 bits (654), Expect = 2.410e-84
Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = 0

Query:   14 DHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGT-KTKVA--DFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAI 184
            D K +  +DDL +PD+KVILLGDSAVGKSKLVERF+MDE+ PRQLSTFALTLFRK   LED   K ++   DFWDTAGQERFSSMHPSYYY AHAC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK F++A+
Sbjct:    4 DAKRETPDDDLGEPDVKVILLGDSAVGKSKLVERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNLANWYKELREYCENIPCFLVANKIDVDLAVTNKKFKFAETHNLEFEFVSAADGTNVVKLFKQAV 177

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: K3X8X9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8X9_GLOUD)

HSP 1 Score: 255 bits (652), Expect = 4.850e-84
Identity = 127/177 (71.75%), Postives = 143/177 (80.79%), Query Frame = 0

Query:   14 DHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLED-----GTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
            D KGD   D+L +PD+K+ILLGDSAVGKSKLVERF+M+E+ PRQLSTFALT+FRK   LED     G K    DFWDTAGQERFSSMHPSYYY A AC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK F++A+K
Sbjct:    3 DAKGDALADELGEPDVKIILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTMFRKEVELEDDDEGKGKKVVEVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLASWYKELREYCENIPCFLVANKIDVDMAVTGKKFKFAETHNLEFNFVSAADGTNVVKVFKDAVK 179

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A7S2XUJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUJ5_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.460e-83
Identity = 126/179 (70.39%), Postives = 142/179 (79.33%), Query Frame = 0

Query:   21 EDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATL---------EDGTK-----TKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
            +DDL DPD KVILLGDSAVGKSKLVER+LM+++NPRQLSTFALTL+RK   L         +DG K     T   D WDTAGQERF+SMHPSYYYRAHAC+LVFDVTRK TY+NL+ WY ELR YCE IP +L ANKID++Y VTKKSFKFA QH LPFFF SAADGTNVV+ FE A+K
Sbjct:    9 QDDLPDPDCKVILLGDSAVGKSKLVERYLMNDFNPRQLSTFALTLYRKEVQLPEDDGDGGKDDGAKGQGGRTVSIDIWDTAGQERFTSMHPSYYYRAHACILVFDVTRKVTYQNLSTWYSELRNYCENIPVILCANKIDINYEVTKKSFKFASQHQLPFFFASAADGTNVVQIFESAVK 187

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: T0R548_SAPDV (Rab family, other n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R548_SAPDV)

HSP 1 Score: 251 bits (641), Expect = 2.210e-82
Identity = 122/166 (73.49%), Postives = 139/166 (83.73%), Query Frame = 0

Query:   19 VDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAI 184
            + ED L D DLK+ILLGDSAVGKSKLVERF+M+EY PRQLSTFALTLFRK   ++DG+  K+ D WDTAGQERFSSMHPSYY+ A AC+LVFDVTRK TY++LA+WY ELR+YCE +PC L ANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK FEEAI
Sbjct:   10 LQEDGLGDADLKIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEFPMDDGSTAKI-DIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENVPCFLAANKIDVDLEVTNKKFKFAETHNLGFHFVSAADGTNVVKIFEEAI 174

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A8K1CGD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD5_PYTOL)

HSP 1 Score: 251 bits (640), Expect = 3.140e-82
Identity = 123/168 (73.21%), Postives = 142/168 (84.52%), Query Frame = 0

Query:   21 EDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGT-KTKV--ADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
            +DDL +PD+KVILLGDSAVGKSKLVERF+M+E+ PRQLSTFALTLFRK   + D   K++V   DFWDTAGQERFSSMHPSYYY A AC++VFDVTRK TY+NL  WY ELR+YCE IPC LVANKIDVD NVT K FKF++ H+LPF FVSAADGTNVVK F++A+K
Sbjct:    9 DDDLGEPDVKVILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVEIPDEKGKSQVIKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLTGWYKELREYCENIPCFLVANKIDVDLNVTSKKFKFSETHNLPFEFVSAADGTNVVKVFQDAVK 176

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BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A5D6XLH8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLH8_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.410e-81
Identity = 124/166 (74.70%), Postives = 138/166 (83.13%), Query Frame = 0

Query:   23 DLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLE--DGTKTKV-ADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 185
            DL +PD+K+ILLGDSAVGKSKLVERF+M+E+ PRQLSTFALTLFRK   LE  DG K  V  DFWDTAGQERFSSMHPSYYY A AC++VFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK F +A+K
Sbjct:   15 DLGEPDVKIILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVELENDDGKKALVKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLANWYQELREYCENIPCFLVANKIDVDLAVTSKKFKFAETHNLEFEFVSAADGTNVVKVFRDAVK 180

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G647_ECTSI	1.220e-107	86.67	RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus Tax...	[more]
A0A835ZG89_9STRA	1.040e-100	85.63	RTW, ras superfamily GTPase n=1 Tax=Tribonema minu...	[more]
A0A125SEA6_9STRA	9.480e-93	73.26	RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 R...	[more]
H3GJM6_PHYRM	1.150e-84	74.71	Uncharacterized protein n=14 Tax=Phytophthora TaxI...	[more]
A0A2D4BD48_PYTIN	2.410e-84	73.56	Rab family, other n=1 Tax=Pythium insidiosum TaxID...	[more]
K3X8X9_GLOUD	4.850e-84	71.75	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A7S2XUJ5_9STRA	1.460e-83	70.39	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
T0R548_SAPDV	2.210e-82	73.49	Rab family, other n=2 Tax=Saprolegniaceae TaxID=47...	[more]
A0A8K1CGD5_PYTOL	3.140e-82	73.21	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A5D6XLH8_9STRA	1.410e-81	74.70	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 72..94 score: 41.13 coord: 165..185 score: 30.65 coord: 29..50 score: 44.32 coord: 133..146 score: 41.12
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 34..184 e-value: 7.4E-4 score: 6.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 31..185 e-value: 2.8E-9 score: 0.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 29..185 e-value: 4.0E-35 score: 132.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 26..185 e-value: 1.2E-8 score: 9.6
None	No IPR available	GENE3D	3.40.50.300		coord: 19..185 e-value: 1.3E-49 score: 170.2
None	No IPR available	PANTHER	PTHR24073:SF263	RAB-LIKE PROTEIN 2A-RELATED	coord: 22..185
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 22..185
None	No IPR available	PROSITE	PS51419	RAB	coord: 20..185 score: 21.845
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 28..181 e-value: 1.8E-23 score: 81.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 30..184 e-value: 3.1E-40 score: 137.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 26..184

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9027	contig	S-dermatodea_contig9027:5337..8271 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9027.17110.1	mRNA_S-dermatodea_contig9027.17110.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9027 5337..8271 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9027.17110.1 ID=prot_S-dermatodea_contig9027.17110.1|Name=mRNA_S-dermatodea_contig9027.17110.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=185bp
MSEGKAEGKTEGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLM
DEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYY
YRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNV
TKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase