mRNA_S-dermatodea_contig9027.17110.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI) HSP 1 Score: 315 bits (807), Expect = 1.220e-107 Identity = 156/180 (86.67%), Postives = 167/180 (92.78%), Query Frame = 1
Query: 16 AEGKTEGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
+E KTEG DH D DED LEDPDLKVILLGDSAVGKSKLVER+LMDEYNPRQLSTFALTLFRKNA L+DG + KV DFWDTAGQERFSSMHPSYYYRAHAC++VFDVTRKATYKNL++WYGELRQY E IPCLL+ANKIDVDY VTKKSFKFAQQHDLPFFFVSAADGTNVVKAF+EA+K
Sbjct: 2 SERKTEGKDHMEDGDED-LEDPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKV-DFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANKIDVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFDEAVK 179
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.040e-100 Identity = 143/167 (85.63%), Postives = 155/167 (92.81%), Query Frame = 1
Query: 55 VDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
D DDL DPDLKVILLGDSAVGKSKLVER+LMDEY+PRQLSTFALTLFRKNA LEDGT+T V DFWDTAGQERF+SMHPSYYYRAHAC++VFDVTRKATYKNL +WYGELRQ+CE IPC+LVANKIDVDYNVTKK FKFA QH+LPFFFVSAADG NVV+ FEEAI+
Sbjct: 10 ADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTV-DFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIR 175
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A125SEA6_9STRA (RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A125SEA6_9STRA) HSP 1 Score: 278 bits (710), Expect = 9.480e-93 Identity = 137/187 (73.26%), Postives = 158/187 (84.49%), Query Frame = 1
Query: 1 MSEGKAEGKT--EGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
+SEGK EGKT EG ++ VD L DPD K+ILLGDSAVGKSKLVER+LMDEYNPRQLST+ALTL+RK LE+G + D WDTAGQERF+S+HPSYYY AH C+LVFDVTRK TY++L++WYGELRQYCE IPC+LVANKIDVDY VTKKSFKFA Q++LPFFFVSAADGTNVVK F EA++
Sbjct: 7 LSEGKDEGKTANEGDNNNNGVD---LGDPDCKIILLGDSAVGKSKLVERYLMDEYNPRQLSTYALTLYRKTVVLEEGNTYDI-DLWDTAGQERFNSLHPSYYYGAHCCILVFDVTRKVTYQHLSDWYGELRQYCESIPCILVANKIDVDYKVTKKSFKFASQYELPFFFVSAADGTNVVKVFHEAVR 189
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: H3GJM6_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GJM6_PHYRM) HSP 1 Score: 257 bits (656), Expect = 1.150e-84 Identity = 127/170 (74.71%), Postives = 143/170 (84.12%), Query Frame = 1
Query: 52 DVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATL--EDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
+V ED L +PD+KVILLGDSAVGKSKLVERF+M+EY PRQLSTFALTLFRK L E+G +T DFWDTAGQERFSSMHPSYYY A AC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD NVT K FKFA+ H+L F FVSAADGTNVVK F++A++
Sbjct: 7 EVLEDSLGEPDVKVILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEVELDGENGKRTVKVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLANWYKELREYCESIPCFLVANKIDVDMNVTNKKFKFAETHNLEFSFVSAADGTNVVKVFKDAVE 176
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN) HSP 1 Score: 256 bits (654), Expect = 2.410e-84 Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = 1
Query: 40 DHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGT-KTKVA--DFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAI 552
D K + +DDL +PD+KVILLGDSAVGKSKLVERF+MDE+ PRQLSTFALTLFRK LED K ++ DFWDTAGQERFSSMHPSYYY AHAC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD VT K FKFA+ H+L F FVSAADGTNVVK F++A+
Sbjct: 4 DAKRETPDDDLGEPDVKVILLGDSAVGKSKLVERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNLANWYKELREYCENIPCFLVANKIDVDLAVTNKKFKFAETHNLEFEFVSAADGTNVVKLFKQAV 177
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: K3X8X9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8X9_GLOUD) HSP 1 Score: 255 bits (652), Expect = 4.850e-84 Identity = 127/177 (71.75%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 40 DHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLED-----GTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
D KGD D+L +PD+K+ILLGDSAVGKSKLVERF+M+E+ PRQLSTFALT+FRK LED G K DFWDTAGQERFSSMHPSYYY A AC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD VT K FKFA+ H+L F FVSAADGTNVVK F++A+K
Sbjct: 3 DAKGDALADELGEPDVKIILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTMFRKEVELEDDDEGKGKKVVEVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLASWYKELREYCENIPCFLVANKIDVDMAVTGKKFKFAETHNLEFNFVSAADGTNVVKVFKDAVK 179
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A7S2XUJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUJ5_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.460e-83 Identity = 126/179 (70.39%), Postives = 142/179 (79.33%), Query Frame = 1
Query: 61 EDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATL---------EDGTK-----TKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
+DDL DPD KVILLGDSAVGKSKLVER+LM+++NPRQLSTFALTL+RK L +DG K T D WDTAGQERF+SMHPSYYYRAHAC+LVFDVTRK TY+NL+ WY ELR YCE IP +L ANKID++Y VTKKSFKFA QH LPFFF SAADGTNVV+ FE A+K
Sbjct: 9 QDDLPDPDCKVILLGDSAVGKSKLVERYLMNDFNPRQLSTFALTLYRKEVQLPEDDGDGGKDDGAKGQGGRTVSIDIWDTAGQERFTSMHPSYYYRAHACILVFDVTRKVTYQNLSTWYSELRNYCENIPVILCANKIDINYEVTKKSFKFASQHQLPFFFASAADGTNVVQIFESAVK 187
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: T0R548_SAPDV (Rab family, other n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R548_SAPDV) HSP 1 Score: 251 bits (641), Expect = 2.210e-82 Identity = 122/166 (73.49%), Postives = 139/166 (83.73%), Query Frame = 1
Query: 55 VDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAI 552
+ ED L D DLK+ILLGDSAVGKSKLVERF+M+EY PRQLSTFALTLFRK ++DG+ K+ D WDTAGQERFSSMHPSYY+ A AC+LVFDVTRK TY++LA+WY ELR+YCE +PC L ANKIDVD VT K FKFA+ H+L F FVSAADGTNVVK FEEAI
Sbjct: 10 LQEDGLGDADLKIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEFPMDDGSTAKI-DIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENVPCFLAANKIDVDLEVTNKKFKFAETHNLGFHFVSAADGTNVVKIFEEAI 174
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A8K1CGD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD5_PYTOL) HSP 1 Score: 251 bits (640), Expect = 3.140e-82 Identity = 123/168 (73.21%), Postives = 142/168 (84.52%), Query Frame = 1
Query: 61 EDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGT-KTKV--ADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
+DDL +PD+KVILLGDSAVGKSKLVERF+M+E+ PRQLSTFALTLFRK + D K++V DFWDTAGQERFSSMHPSYYY A AC++VFDVTRK TY+NL WY ELR+YCE IPC LVANKIDVD NVT K FKF++ H+LPF FVSAADGTNVVK F++A+K
Sbjct: 9 DDDLGEPDVKVILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVEIPDEKGKSQVIKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLTGWYKELREYCENIPCFLVANKIDVDLNVTSKKFKFSETHNLPFEFVSAADGTNVVKVFQDAVK 176
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A5D6XLH8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLH8_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.410e-81 Identity = 124/166 (74.70%), Postives = 138/166 (83.13%), Query Frame = 1
Query: 67 DLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLE--DGTKTKV-ADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
DL +PD+K+ILLGDSAVGKSKLVERF+M+E+ PRQLSTFALTLFRK LE DG K V DFWDTAGQERFSSMHPSYYY A AC++VFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD VT K FKFA+ H+L F FVSAADGTNVVK F +A+K
Sbjct: 15 DLGEPDVKIILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVELENDDGKKALVKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLANWYQELREYCENIPCFLVANKIDVDLAVTSKKFKFAETHNLEFEFVSAADGTNVVKVFRDAVK 180 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9027.17110.1 >prot_S-dermatodea_contig9027.17110.1 ID=prot_S-dermatodea_contig9027.17110.1|Name=mRNA_S-dermatodea_contig9027.17110.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=185bp MSEGKAEGKTEGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMback to top mRNA from alignment at S-dermatodea_contig9027:5337..8271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9027.17110.1 ID=mRNA_S-dermatodea_contig9027.17110.1|Name=mRNA_S-dermatodea_contig9027.17110.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2935bp|location=Sequence derived from alignment at S-dermatodea_contig9027:5337..8271+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9027:5337..8271+ >mRNA_S-dermatodea_contig9027.17110.1 ID=mRNA_S-dermatodea_contig9027.17110.1|Name=mRNA_S-dermatodea_contig9027.17110.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at S-dermatodea_contig9027:5337..8271+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |