mRNA_S-dermatodea_contig9027.17110.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9027.17110.1
Unique NamemRNA_S-dermatodea_contig9027.17110.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 1.220e-107
Identity = 156/180 (86.67%), Postives = 167/180 (92.78%), Query Frame = 1
Query:   16 AEGKTEGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
            +E KTEG DH  D DED LEDPDLKVILLGDSAVGKSKLVER+LMDEYNPRQLSTFALTLFRKNA L+DG + KV DFWDTAGQERFSSMHPSYYYRAHAC++VFDVTRKATYKNL++WYGELRQY E IPCLL+ANKIDVDY VTKKSFKFAQQHDLPFFFVSAADGTNVVKAF+EA+K
Sbjct:    2 SERKTEGKDHMEDGDED-LEDPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKV-DFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANKIDVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFDEAVK 179          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.040e-100
Identity = 143/167 (85.63%), Postives = 155/167 (92.81%), Query Frame = 1
Query:   55 VDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
             D DDL DPDLKVILLGDSAVGKSKLVER+LMDEY+PRQLSTFALTLFRKNA LEDGT+T V DFWDTAGQERF+SMHPSYYYRAHAC++VFDVTRKATYKNL +WYGELRQ+CE IPC+LVANKIDVDYNVTKK FKFA QH+LPFFFVSAADG NVV+ FEEAI+
Sbjct:   10 ADTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTV-DFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIR 175          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A125SEA6_9STRA (RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A125SEA6_9STRA)

HSP 1 Score: 278 bits (710), Expect = 9.480e-93
Identity = 137/187 (73.26%), Postives = 158/187 (84.49%), Query Frame = 1
Query:    1 MSEGKAEGKT--EGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
            +SEGK EGKT  EG ++   VD   L DPD K+ILLGDSAVGKSKLVER+LMDEYNPRQLST+ALTL+RK   LE+G    + D WDTAGQERF+S+HPSYYY AH C+LVFDVTRK TY++L++WYGELRQYCE IPC+LVANKIDVDY VTKKSFKFA Q++LPFFFVSAADGTNVVK F EA++
Sbjct:    7 LSEGKDEGKTANEGDNNNNGVD---LGDPDCKIILLGDSAVGKSKLVERYLMDEYNPRQLSTYALTLYRKTVVLEEGNTYDI-DLWDTAGQERFNSLHPSYYYGAHCCILVFDVTRKVTYQHLSDWYGELRQYCESIPCILVANKIDVDYKVTKKSFKFASQYELPFFFVSAADGTNVVKVFHEAVR 189          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: H3GJM6_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GJM6_PHYRM)

HSP 1 Score: 257 bits (656), Expect = 1.150e-84
Identity = 127/170 (74.71%), Postives = 143/170 (84.12%), Query Frame = 1
Query:   52 DVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATL--EDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
            +V ED L +PD+KVILLGDSAVGKSKLVERF+M+EY PRQLSTFALTLFRK   L  E+G +T   DFWDTAGQERFSSMHPSYYY A AC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD NVT K FKFA+ H+L F FVSAADGTNVVK F++A++
Sbjct:    7 EVLEDSLGEPDVKVILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEVELDGENGKRTVKVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLANWYKELREYCESIPCFLVANKIDVDMNVTNKKFKFAETHNLEFSFVSAADGTNVVKVFKDAVE 176          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN)

HSP 1 Score: 256 bits (654), Expect = 2.410e-84
Identity = 128/174 (73.56%), Postives = 144/174 (82.76%), Query Frame = 1
Query:   40 DHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGT-KTKVA--DFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAI 552
            D K +  +DDL +PD+KVILLGDSAVGKSKLVERF+MDE+ PRQLSTFALTLFRK   LED   K ++   DFWDTAGQERFSSMHPSYYY AHAC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK F++A+
Sbjct:    4 DAKRETPDDDLGEPDVKVILLGDSAVGKSKLVERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNLANWYKELREYCENIPCFLVANKIDVDLAVTNKKFKFAETHNLEFEFVSAADGTNVVKLFKQAV 177          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: K3X8X9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8X9_GLOUD)

HSP 1 Score: 255 bits (652), Expect = 4.850e-84
Identity = 127/177 (71.75%), Postives = 143/177 (80.79%), Query Frame = 1
Query:   40 DHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLED-----GTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
            D KGD   D+L +PD+K+ILLGDSAVGKSKLVERF+M+E+ PRQLSTFALT+FRK   LED     G K    DFWDTAGQERFSSMHPSYYY A AC+LVFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK F++A+K
Sbjct:    3 DAKGDALADELGEPDVKIILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTMFRKEVELEDDDEGKGKKVVEVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLASWYKELREYCENIPCFLVANKIDVDMAVTGKKFKFAETHNLEFNFVSAADGTNVVKVFKDAVK 179          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A7S2XUJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUJ5_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.460e-83
Identity = 126/179 (70.39%), Postives = 142/179 (79.33%), Query Frame = 1
Query:   61 EDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATL---------EDGTK-----TKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
            +DDL DPD KVILLGDSAVGKSKLVER+LM+++NPRQLSTFALTL+RK   L         +DG K     T   D WDTAGQERF+SMHPSYYYRAHAC+LVFDVTRK TY+NL+ WY ELR YCE IP +L ANKID++Y VTKKSFKFA QH LPFFF SAADGTNVV+ FE A+K
Sbjct:    9 QDDLPDPDCKVILLGDSAVGKSKLVERYLMNDFNPRQLSTFALTLYRKEVQLPEDDGDGGKDDGAKGQGGRTVSIDIWDTAGQERFTSMHPSYYYRAHACILVFDVTRKVTYQNLSTWYSELRNYCENIPVILCANKIDINYEVTKKSFKFASQHQLPFFFASAADGTNVVQIFESAVK 187          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: T0R548_SAPDV (Rab family, other n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R548_SAPDV)

HSP 1 Score: 251 bits (641), Expect = 2.210e-82
Identity = 122/166 (73.49%), Postives = 139/166 (83.73%), Query Frame = 1
Query:   55 VDEDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAI 552
            + ED L D DLK+ILLGDSAVGKSKLVERF+M+EY PRQLSTFALTLFRK   ++DG+  K+ D WDTAGQERFSSMHPSYY+ A AC+LVFDVTRK TY++LA+WY ELR+YCE +PC L ANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK FEEAI
Sbjct:   10 LQEDGLGDADLKIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEFPMDDGSTAKI-DIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENVPCFLAANKIDVDLEVTNKKFKFAETHNLGFHFVSAADGTNVVKIFEEAI 174          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A8K1CGD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD5_PYTOL)

HSP 1 Score: 251 bits (640), Expect = 3.140e-82
Identity = 123/168 (73.21%), Postives = 142/168 (84.52%), Query Frame = 1
Query:   61 EDDLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLEDGT-KTKV--ADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
            +DDL +PD+KVILLGDSAVGKSKLVERF+M+E+ PRQLSTFALTLFRK   + D   K++V   DFWDTAGQERFSSMHPSYYY A AC++VFDVTRK TY+NL  WY ELR+YCE IPC LVANKIDVD NVT K FKF++ H+LPF FVSAADGTNVVK F++A+K
Sbjct:    9 DDDLGEPDVKVILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVEIPDEKGKSQVIKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLTGWYKELREYCENIPCFLVANKIDVDLNVTSKKFKFSETHNLPFEFVSAADGTNVVKVFQDAVK 176          
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Match: A0A5D6XLH8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLH8_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.410e-81
Identity = 124/166 (74.70%), Postives = 138/166 (83.13%), Query Frame = 1
Query:   67 DLEDPDLKVILLGDSAVGKSKLVERFLMDEYNPRQLSTFALTLFRKNATLE--DGTKTKV-ADFWDTAGQERFSSMHPSYYYRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK 555
            DL +PD+K+ILLGDSAVGKSKLVERF+M+E+ PRQLSTFALTLFRK   LE  DG K  V  DFWDTAGQERFSSMHPSYYY A AC++VFDVTRK TY+NLA WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H+L F FVSAADGTNVVK F +A+K
Sbjct:   15 DLGEPDVKIILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVELENDDGKKALVKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLANWYQELREYCENIPCFLVANKIDVDLAVTSKKFKFAETHNLEFEFVSAADGTNVVKVFRDAVK 180          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9027.17110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G647_ECTSI1.220e-10786.67RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus Tax... [more]
A0A835ZG89_9STRA1.040e-10085.63RTW, ras superfamily GTPase n=1 Tax=Tribonema minu... [more]
A0A125SEA6_9STRA9.480e-9373.26RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 R... [more]
H3GJM6_PHYRM1.150e-8474.71Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A2D4BD48_PYTIN2.410e-8473.56Rab family, other n=1 Tax=Pythium insidiosum TaxID... [more]
K3X8X9_GLOUD4.850e-8471.75Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2XUJ5_9STRA1.460e-8370.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
T0R548_SAPDV2.210e-8273.49Rab family, other n=2 Tax=Saprolegniaceae TaxID=47... [more]
A0A8K1CGD5_PYTOL3.140e-8273.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XLH8_9STRA1.410e-8174.70Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9027contigS-dermatodea_contig9027:5337..8271 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.9
Seed ortholog evalue4.9e-83
Seed eggNOG ortholog2880.D7G647
Preferred nameRABL2B
KEGG koko:K07883,ko:K07931,ko:K07976,ko:K17977
GOsGO:0000001,GO:0000003,GO:0000131,GO:0000166,GO:0000242,GO:0000902,GO:0000904,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005813,GO:0005814,GO:0005815,GO:0005856,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0006810,GO:0006928,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007029,GO:0007030,GO:0007275,GO:0007338,GO:0007399,GO:0008150,GO:0008594,GO:0009566,GO:0009653,GO:0009987,GO:0010256,GO:0010970,GO:0012505,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019953,GO:0022008,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030317,GO:0030427,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032989,GO:0032991,GO:0035639,GO:0036064,GO:0036094,GO:0036126,GO:0040011,GO:0042073,GO:0042461,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0046530,GO:0046907,GO:0048308,GO:0048309,GO:0048311,GO:0048313,GO:0048468,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0060271,GO:0070925,GO:0071840,GO:0097159,GO:0097223,GO:0097225,GO:0097367,GO:0097722,GO:0097729,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901265,GO:1901363
EggNOG free text desc.GTP binding
EggNOG OGsCOG1100@1,KOG0087@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04031,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRTW, Ras superfamily GTPase
Ec32 orthologEc-11_005150.1
Exons4
Model size555
Cds size555
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9027.17110.1prot_S-dermatodea_contig9027.17110.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9027 5337..8271 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925380.9151707-CDS-S-dermatodea_contig9027:5336..54261622925380.9151707-CDS-S-dermatodea_contig9027:5336..5426Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 5337..5426 +
1694079894.809382-CDS-S-dermatodea_contig9027:5336..54261694079894.809382-CDS-S-dermatodea_contig9027:5336..5426Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 5337..5426 +
1622925380.9300609-CDS-S-dermatodea_contig9027:6772..69231622925380.9300609-CDS-S-dermatodea_contig9027:6772..6923Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 6773..6923 +
1694079894.8287616-CDS-S-dermatodea_contig9027:6772..69231694079894.8287616-CDS-S-dermatodea_contig9027:6772..6923Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 6773..6923 +
1622925380.9443986-CDS-S-dermatodea_contig9027:7185..73911622925380.9443986-CDS-S-dermatodea_contig9027:7185..7391Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 7186..7391 +
1694079894.8410325-CDS-S-dermatodea_contig9027:7185..73911694079894.8410325-CDS-S-dermatodea_contig9027:7185..7391Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 7186..7391 +
1622925380.9577732-CDS-S-dermatodea_contig9027:8163..82711622925380.9577732-CDS-S-dermatodea_contig9027:8163..8271Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 8164..8271 +
1694079894.8524435-CDS-S-dermatodea_contig9027:8163..82711694079894.8524435-CDS-S-dermatodea_contig9027:8163..8271Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9027 8164..8271 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9027.17110.1

>prot_S-dermatodea_contig9027.17110.1 ID=prot_S-dermatodea_contig9027.17110.1|Name=mRNA_S-dermatodea_contig9027.17110.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=185bp
MSEGKAEGKTEGTDHKGDVDEDDLEDPDLKVILLGDSAVGKSKLVERFLM
DEYNPRQLSTFALTLFRKNATLEDGTKTKVADFWDTAGQERFSSMHPSYY
YRAHACVLVFDVTRKATYKNLAEWYGELRQYCEGIPCLLVANKIDVDYNV
TKKSFKFAQQHDLPFFFVSAADGTNVVKAFEEAIK
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mRNA from alignment at S-dermatodea_contig9027:5337..8271+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9027.17110.1 ID=mRNA_S-dermatodea_contig9027.17110.1|Name=mRNA_S-dermatodea_contig9027.17110.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2935bp|location=Sequence derived from alignment at S-dermatodea_contig9027:5337..8271+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCAGAGGGCAAGGCAGAGGGCAAGACCGAGGGCACGGATCACAAGGG GGATGTCGACGAGGACGATCTTGAAGATCCTGACCTCAAGGTATACATGT ACTACGAACCAGGGTCTTGAACTACAGACTGTGCTTGTTTGTGTGCATCA GGCGCGGGGTGATGAGCGTGACTTTCAACAGACACTTATAGTTGCAATCC GCTTTTGGGCAGTATCATACGGGCCGCGCCTTGATACAATCCGCGTGGAG CAAGATCTGAGCGCTGTCATTGCGCACTGCGTTGTGACACCCACACACAT ACTTACATATGTATGTATGCATACCTACGGTGTTTATTTATGCTGGCCCT TCAGGCCCGAGGTCACGTGCGTGCGTGCATGGATGGGAGTTGGCATGCAA GGAAAGGTGCTAGGAGACACACTACTGCTGCTGCTGCTGTGTATAATGAC TTAGATTGATGAATGCATACAGTAATTGCGATGATGCATCGTCTCCCAAG TACTATCATACTGTAGTATGCGCCGCTTCTTGTTGTCGTGACGTGCAAAG GAGAAGAAGATCCGTATGAAAAAAATCTGTGAAAATTCGAGTGGATCGGC AAGCACGTCTACATATGATGGTTCCATCCACCGTAAAATATGCCATGCCG ATGTATGTAGACAGGCAGACGTGTTGGGTACCCTCGTTCTTTCTTAATTC CGTTCGAAAGCGTGGCCACACTCTTGACAAGACAAAGAAAACAGGAGCCG ATCGACAGGGCCAAAATCGGGCACACACAAGGAAAAAAACGATGCACCTA ACGGATCAATTTGCTGACGACGCCAGCTAAAACGTGTAGGGTACTTTTTC TGTACTAAACTGACTCTACTGGGCACCTGTGCCGTGCCGTCATGTGACAC TGTCTGTGCAGCACACAGAGTGGGTATGGAGGCTCCAACACGTCCGTCTG CCGGTAGATTCGGGAGCATAAAAACGACGTTATTTGACCACAACACATAA TAACAAGGGCATGGATAACCTTACACACAGCCGGCGCACATCGAACATGG GGACGGCAGAACGAGAACTAGAAACCTGCTGCTCCCCCCTCTCATTCCTG ATGTGCCACTCCAGTGTGCGAATAGCTTTAACTGCGTTGCCTTTGTCCAA AGCGCCTTATACTCTTATACTTCCACACCATACCACCAAAGAAAGACGAT CGGTCCTAATAACGCGCCCATTTATTGTCGTCAAGCGCAAAGCGCGTGAT TGATATGTGATGTGTACTACACTCAGCACAAACTACTGCCATGACCTCGC ACGTCAACGTCCTCAAGTTCAAATCAACCTTCCTTCCAAGATTGATGTCC GCCAGTCAGCCCGCCCCCACCCCCATCTTACGAGAGGCTCACTAAGACGC CCCTCCCCCCCGCGCGCGCCCTGCCTCGCCGCGCAGGTAATTCTCTTGGG CGACTCGGCCGTGGGCAAATCTAAGCTGGTGGAGCGATTTCTTATGGACG AGTACAACCCCCGGCAGCTGTCGACGTTCGCCCTCACGCTCTTCCGCAAG AACGCGACGCTGGAGGACGGCACGAAGACTAAAGTAGGTACGTACGCAGG CGCCGCGATCACGGCATTTCTTCTCAACCACCTCGGTGGTACGTGCTGCA TCGGTGACCACTTGCATAGGACAGGTTGTATGCACTCGCCGCAACGGCGG TCAGAAGTAGGGAGCGCCTGTTCTAGTAGTAAAATAGTATACAAGCGCAT CTATACGAAAAGGCATTCCTCGGAGCACAAAGCAATTAATCGATGGTGGA TTCCATTGTCCGCTGCTGCCACCGCCGCCGCCGCTTCCTCGGGAACGAGC AGATTTTTGGGACACTGCCGGGCAGGAGCGGTTTAGCAGCATGCATCCTT CCTACTACTATCGGGCGCATGCCTGCGTGTTGGTGTTCGACGTGACACGG AAGGCGACCTACAAGAACCTGGCGGAGTGGTATGGGGAGCTGCGGCAGTA CTGCGAGGGTATCCCGTGCTTGCTCGTTGCCAACAAGATCGACGTCGATT ACAACGTGAGAGGCGGCCGTCGTCCGTAAGCCCAACCAGAGCTGATCGTT AACGTGTGGGAATACACTTTGGGCGAGGCGTTTTGATTTTTCAAGTACTA GTAATATAGTACAATTAGCAAGTGGGTGATAAACGTTCCCAATCCTTCAG GCTTCAAGCACGCGTGTGTTTGCAGACGCTTATGATTGTGACAACGGTAA ACCCCCCCCCCTACCCCATATGTGGCAAAGTAGGAAGGAACGATTGGCCA TCGACGATCGATCTTGTCGGAACAATATAGTAATGCTCTGTACTGCTGAA GACGCGTAGTCAATGGTCTGACCGCTAAGTGAGGCATGCAAAACTTGAGT AACCCCCCCCCTCCCCCCCCCCCCAGGACTTTGCCACGTTGGCCTTGGAG GCGTGCCACTCGAGGAGAATTCAACTATACGCTTGTGGCCAAAGGGTTGG GATGTTGCTGGTACAACGCGCAGTCTACACTCACGAAATAGGTGGCACGC ATACCTACCCTTGATCAAGGATAGCTTCAAGAAAGATACACGCTTACACC CAGCGGAAGTCTGCCGCGGTGGGTTGCTGTTTTTCCCTTTCATTTCCGCG TCCTCCGTGAAGGTAAATAAGATTGATGAAGAAGGCGGACTGAAACCAAA TCGCTCTTGACTCCCCAACCCCACCCCCAACCTCACCCCCACCCCCACCC CCGCCCCCTCGCCCTTCCCCTCCCTGTCGTTCGGCGTCTATGTGTAAAAA TCTCTTATAAAATGTCGGTGGAATCAGGTCACCAAGAAGAGCTTCAAGTT CGCGCAACAGCATGACCTGCCCTTCTTTTTTGTGTCCGCCGCGGACGGAA CGAACGTTGTGAAGGCGTTCGAGGAGGCCATCAAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9027:5337..8271+

>mRNA_S-dermatodea_contig9027.17110.1 ID=mRNA_S-dermatodea_contig9027.17110.1|Name=mRNA_S-dermatodea_contig9027.17110.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at S-dermatodea_contig9027:5337..8271+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTCAGAGGGCAAGGCAGAGGGCAAGACCGAGGGCACGGATCACAAGGG
GGATGTCGACGAGGACGATCTTGAAGATCCTGACCTCAAGATGTCAGAGG
GCAAGGCAGAGGGCAAGACCGAGGGCACGGATCACAAGGGGGATGTCGAC
GAGGACGATCTTGAAGATCCTGACCTCAAGGTAATTCTCTTGGGCGACTC
GGCCGTGGGCAAATCTAAGCTGGTGGAGCGATTTCTTATGGACGAGTACA
ACCCCCGGCAGCTGTCGACGTTCGCCCTCACGCTCTTCCGCAAGAACGCG
ACGCTGGAGGACGGCACGAAGACTAAAGTAGGTAATTCTCTTGGGCGACT
CGGCCGTGGGCAAATCTAAGCTGGTGGAGCGATTTCTTATGGACGAGTAC
AACCCCCGGCAGCTGTCGACGTTCGCCCTCACGCTCTTCCGCAAGAACGC
GACGCTGGAGGACGGCACGAAGACTAAAGTAGCAGATTTTTGGGACACTG
CCGGGCAGGAGCGGTTTAGCAGCATGCATCCTTCCTACTACTATCGGGCG
CATGCCTGCGTGTTGGTGTTCGACGTGACACGGAAGGCGACCTACAAGAA
CCTGGCGGAGTGGTATGGGGAGCTGCGGCAGTACTGCGAGGGTATCCCGT
GCTTGCTCGTTGCCAACAAGATCGACGTCGATTACAACCAGATTTTTGGG
ACACTGCCGGGCAGGAGCGGTTTAGCAGCATGCATCCTTCCTACTACTAT
CGGGCGCATGCCTGCGTGTTGGTGTTCGACGTGACACGGAAGGCGACCTA
CAAGAACCTGGCGGAGTGGTATGGGGAGCTGCGGCAGTACTGCGAGGGTA
TCCCGTGCTTGCTCGTTGCCAACAAGATCGACGTCGATTACAACGTCACC
AAGAAGAGCTTCAAGTTCGCGCAACAGCATGACCTGCCCTTCTTTTTTGT
GTCCGCCGCGGACGGAACGAACGTTGTGAAGGCGTTCGAGGAGGCCATCA
AGGTCACCAAGAAGAGCTTCAAGTTCGCGCAACAGCATGACCTGCCCTTC
TTTTTTGTGTCCGCCGCGGACGGAACGAACGTTGTGAAGGCGTTCGAGGA
GGCCATCAAG
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