prot_S-dermatodea_contig9015.17102.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9015.17102.1
Unique Nameprot_S-dermatodea_contig9015.17102.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length761
Homology
BLAST of mRNA_S-dermatodea_contig9015.17102.1 vs. uniprot
Match: A0A6H5JQC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQC7_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 3.130e-99
Identity = 332/827 (40.15%), Postives = 396/827 (47.88%), Query Frame = 0
Query:    5 RNDVIRSSSSVSTASL-YGQSTPAAIA----------APAVAALQGVVVAVRGARCNRRRLEPLCGLCEGAVRACVCVVTPXXXXXXXXHPPTHPPRLLRWLRWTIYNKKGGPPGGVLGSTGGLKGNPVLMSEAHGSGDSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHLGAAAEALAAELVGIAGLAEMCSPAGVLKCLALSAAAMAAEAAAGKSCG------EGDDIGSSXXXXXXXXXXXXXXXXVDGFREAE---------RKREDASFTAAEERVRYIVGRLDGGSAGGSTAPGGAAGV---SAPTHGQDLALTEARSSA--DNGGGQGADRGGDAEGVLSADEAFRREFAERVREAGGLRALALSWAAVSRLEVSFLAWVGEPAKMGQAPIDLKAELLRLASLADALHPPPGAXXXXXXXXXXXXXXXXXXLGAFPLSLPRDALAPPERSGSGATGTAVATTAAHGSSTKGGQGAVAGIGVGTGA---------------------------------AMDPPIGAPLRPRHYVCRGRLSAAAAASLLRGANVGXXXXXXXXXXXXXXWRGGVTVAFAGSSGAGKACLAAEVVGRRDVRAKFGEEVLWLQVGRTGGADLPAFLRRLAHAYHKVVLSKRLRHPPXXXXIGRFRGPR---ATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---ASWFTPYMSGLGLRCLAVLEDVYEAEVVAAASAAGFDLVVTTTLRDLLPDSPLCTRLDVGGLTMDESRSLLRKCSGLDPEATLPLSADNVIKVC 761
            +  V RS+S++S+AS+ +GQ+                APAVAALQG++ AVR AR  RR+L+ L  +C+ AV   +      XXXXXXX                              S          + + HGSG+ +                                   R+L AAAE L AE+VGI  LAE CSP G+L+ LAL++    ++   G+         +GD  G               XXX                 RK + A F AA ERVR IVGRL+      S A   AA V   +AP HG D++   A  +   D       +   D EGV    EAFR EF E V EAGGL+AL LSW  V+RLE +FLAWV E    G    DLKAE+LR++S A+AL                          A PL+            G G++ +   + +   +S  G  GA                                           A +PP+GAPLRPRH+VCR RLSA                       XXXXW+G   V FAGSSGAGKACLAAEVVGRRDVRAKFG+ VLWLQVG +GG DL   L RLAHAYH+VVL KRLR+PP    IGRFRGPR   A AXXXXXXXXXXXX                                         A   A+WFTPYMSGLGLRCL VLEDV+EAEVVAAASAAGFDLVVTT  RDL+PDSPLCTRLDVGGL  DE+RSLLR+CSGL  +A LP SAD VIK C
Sbjct:    2 KKQVSRSTSTISSASVSHGQAAXXXXXXXXXXXXXXXAPAVAALQGLLAAVRAARACRRQLDALSEICDSAVATLIEACQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNXXXS--------XXVGDIHGSGNGSDTGAASLVAVAAGAAPAQPPVS-------------RNLRAAAELLGAEVVGITALAEACSPRGILESLALASRRYVSKGKHGEGGHRXXXRHDGDAGGGKPGVGAEEEMKEGAXXXXXXXXXXXXXPVTVVSLRKEKAAKFRAAAERVRLIVGRLEVSRDVTSPAAAAAAEVGVAAAPVHGGDVSFFPAARAVWEDEXXXXXGEAERDDEGV----EAFRSEFVESVEEAGGLKALTLSWTGVARLEEAFLAWVVEAG--GNTGTDLKAEILRVSSRAEAL----------------------VKAEARPLA------------GQGSSSSGFPSLSRLLASYDGPAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSNNVDDHHKPLPLAAEPPVGAPLRPRHHVCRDRLSAXXXXXXXXXXXX-----------XXXXWKGETVVTFAGSSGAGKACLAAEVVGRRDVRAKFGDSVLWLQVGLSGGKDLACLLHRLAHAYHRVVLCKRLRNPPPLPPIGRFRGPRNAEAAAXXXXXXXXXXXXCGVFSTMNATFKAAYNFRGIRCDDPLFPTFCLGLLLKAEATATAAATWFTPYMSGLGLRCLVVLEDVWEAEVVAAASAAGFDLVVTTAFRDLVPDSPLCTRLDVGGLARDEARSLLRRCSGLAWQAPLPPSADGVIKAC 756          
BLAST of mRNA_S-dermatodea_contig9015.17102.1 vs. uniprot
Match: D8LCK2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK2_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 8.680e-88
Identity = 342/756 (45.24%), Postives = 397/756 (52.51%), Query Frame = 0
Query:   29 IAAPAVAALQGVVVAVRGARCNRRRLEPLCGLCEGAVRACVCVVTPXXXXXXXXHPPTHPPRLLRWLRWTIYNKKGGPPGGVLGSTGGLKGNPVLMSEAHGSGDSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHLGAAAEALAAELVGIAGLAEMCSPAGVLKCLALSAAAMAAEAAAGKS-----------CGEGDD-IGSSXXXXXXXXXXXXXXXXVDGFREAE-RKREDASFTAAEERVRYIVGRLDGGSAGGSTAPGGAAGVSA----------PTHGQDLALTEARSSADNGGGQGADRGGDAEGVLSADEAFRREFAERVREAGGLRALALSWAAVSRLEVSFLAWVGEPAKMGQAPIDLKAELLRLASLADALHPPPGAXXXXXXXXXXXXXXXXXXLGAFPLSLPRDALAPPERSGSGATGTAVATTAAHGSSTKGGQGAVAGIGVGTGAAMDPPIGAPLRPRHYVCRGRLSAAAAASLLRGANVGXXXXXXXXXXXXXXWRGGVTVAFAGSSGAGKACLAAEVVGRRDVRAKFGEEVLWLQVGRTGGADLPAFLRRLAHAYHKVVLSKRLRHPPXXXXIGRFRGPRATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASWFTPYMSGLGLRCLAVLEDVYEAEVVAAASAAGFDLVVTTTLRDLLPDSPLCTRLDVGGLTMDESRSLLRKCSGLDPEATLPLSADNVIKVC 761
            +AAPAVAALQG++ AVR AR  RR+L+ L  +C+ AV   +               P                                     ++ + HGSG+ +   XXXXXXXXXXXXXXXX                R+L AAAE L AE+VGI  LAE CSP G+L+ LAL+     ++   G+             G G+  +G+ XXXXXXXXXXXXXXXX         RK + A F A  ERVR IVGRL+   +   T+P                  P HG D++                    +AE      EAFR EF E V EAGGL+AL LSW  V+RLE +FLAWV E    G    DLKAE+LR++SLA+AL                                 +D   P                             +AG G  + +   P +                     S L GA+ G               +G   V FAGSSGAGKACLAAEVVGRRDVRAKFG+ VLWLQVGR+GG DL   L RLAHAYH+VVL KRLR+PP    I RFRGPR                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA+WFTPYMSGLGLRCL VLEDV+EAEVVAAASAAGFDLVVTT  RDL+PDSPLCTRLDVGGL  DE+RSLLR+CSGL  +A LP SAD VIK C
Sbjct:  213 VAAPAVAALQGLLAAVRAARACRRQLDALSEICDSAVAMLI----------ETCQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVVGDIHGSGNGSDTGXXXXXXXXXXXXXXXXPSQPPVS---------RNLRAAAELLGAEVVGITALAEACSPRGILESLALATRRDVSKRKPGEGGHRRGGRHDGDAGGGEPGVGAEXXXXXXXXXXXXXXXXXTPVAVVSLRKEKAAKFRATAERVRLIVGRLE--VSRDVTSPXXXXXXXXXXXXXXXXXXPVHGGDVSFFXXXXXXXX--XXXXXXXXEAEREDEGVEAFRSEFVESVEEAGGLKALTLSWTGVARLEEAFLAWVVEAG--GNTGTDLKAEILRVSSLAEALV--------------------------------KDEARP-----------------------------LAGQGSSSSSPGFPSL---------------------SRLLGADGGGAGG-----------KGETVVTFAGSSGAGKACLAAEVVGRRDVRAKFGDSVLWLQVGRSGGTDLACLLHRLAHAYHRVVLCKRLRNPPPLPPISRFRGPR----------NGEAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATWFTPYMSGLGLRCLVVLEDVWEAEVVAAASAAGFDLVVTTAFRDLVPDSPLCTRLDVGGLARDEARSLLRRCSGLAWQAPLPPSADGVIKAC 840          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9015.17102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQC7_9PHAE3.130e-9940.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK2_ECTSI8.680e-8845.24Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45691FAMILY NOT NAMEDcoord: 348..603

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9015contigS-dermatodea_contig9015:129..8173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9015.17102.1mRNA_S-dermatodea_contig9015.17102.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9015 129..8173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9015.17102.1 ID=prot_S-dermatodea_contig9015.17102.1|Name=mRNA_S-dermatodea_contig9015.17102.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=761bp
TTARRNDVIRSSSSVSTASLYGQSTPAAIAAPAVAALQGVVVAVRGARCN
RRRLEPLCGLCEGAVRACVCVVTPPPPPPPTTHPPTHPPRLLRWLRWTIY
NKKGGPPGGVLGSTGGLKGNPVLMSEAHGSGDSATTTSSSSGALAAAVAA
ATAAAAAATTAAQWPPPPPRHLGAAAEALAAELVGIAGLAEMCSPAGVLK
CLALSAAAMAAEAAAGKSCGEGDDIGSSGSSGSSAGGGGGGGSGVDGFRE
AERKREDASFTAAEERVRYIVGRLDGGSAGGSTAPGGAAGVSAPTHGQDL
ALTEARSSADNGGGQGADRGGDAEGVLSADEAFRREFAERVREAGGLRAL
ALSWAAVSRLEVSFLAWVGEPAKMGQAPIDLKAELLRLASLADALHPPPG
APPPPPPPAPSLPPPSLPPLGAFPLSLPRDALAPPERSGSGATGTAVATT
AAHGSSTKGGQGAVAGIGVGTGAAMDPPIGAPLRPRHYVCRGRLSAAAAA
SLLRGANVGGGGGGAGGGGAGGGWRGGVTVAFAGSSGAGKACLAAEVVGR
RDVRAKFGEEVLWLQVGRTGGADLPAFLRRLAHAYHKVVLSKRLRHPPPP
PPIGRFRGPRATATANVAAAAAAVAAAALGEEDGGGGGSGAAAASAAASA
AAASASVAAVEATASAAASWFTPYMSGLGLRCLAVLEDVYEAEVVAAASA
AGFDLVVTTTLRDLLPDSPLCTRLDVGGLTMDESRSLLRKCSGLDPEATL
PLSADNVIKVC
back to top