prot_S-dermatodea_contig90028.17094.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig90028.17094.1
Unique Nameprot_S-dermatodea_contig90028.17094.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length54
Homology
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: G4ZZP8_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZZP8_PHYSP)

HSP 1 Score: 75.1 bits (183), Expect = 1.050e-16
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 50
            GRWT  EH  FL GL+RFGK WK I +LV TRT+VQIRTHAQKYL K S+
Sbjct:   19 GRWTKREHELFLEGLQRFGKSWKKISSLVHTRTLVQIRTHAQKYLQKQSR 68          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.290e-16
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKD-WKGIRTLVETRTIVQIRTHAQKYLIKLSKGRPF 54
            GRWT  EHH FL G+ RF ++ W GI TL+ TRT++QIRTHAQKY  K+ KG PF
Sbjct:   13 GRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPF 67          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A1V9ZGA4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGA4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.630e-16
Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKGRPF 54
            GRWT  EH  FL GL R+GK WK I  LV TRT+VQIRTHAQKYL K +K +PF
Sbjct:   81 GRWTKKEHELFLEGLRRYGKSWKHIANLVVTRTLVQIRTHAQKYLQKQNKSKPF 134          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A0N7L7R3_PLAHL (Protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7R3_PLAHL)

HSP 1 Score: 77.8 bits (190), Expect = 6.970e-16
Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKG 51
            GRWT  EH  FL GL+RFGK WK I +LV TRT+VQIRTHAQKYL K S+G
Sbjct:  108 GRWTKREHELFLEGLQRFGKSWKKISSLVHTRTLVQIRTHAQKYLQKQSRG 158          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A7S3LKU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKU2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.610e-15
Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 50
            GRWT  EH RF+ GL+ +GK+WK I  ++ETRTIVQIRTHAQKY  K++K
Sbjct:   90 GRWTKAEHDRFVKGLDVYGKEWKKIAAMIETRTIVQIRTHAQKYFQKIAK 139          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A067D317_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D317_SAPPC)

HSP 1 Score: 76.3 bits (186), Expect = 2.000e-15
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKGRP 53
            GRWT  EH  FL GLER+GK WK I  LV TRT+VQIRTHAQKYL K +K  P
Sbjct:   90 GRWTKKEHELFLEGLERYGKSWKHISNLVVTRTLVQIRTHAQKYLQKQNKASP 142          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: K0S452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S452_THAOC)

HSP 1 Score: 76.6 bits (187), Expect = 4.390e-15
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKGR 52
            GRWT  EH  FL GLER GK WK I TL+++RT+VQIRTHAQKY  KL+K R
Sbjct:  311 GRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKAR 362          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A7S3XSC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSC1_HETAK)

HSP 1 Score: 75.9 bits (185), Expect = 4.870e-15
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 50
            GRW   EH  FL G+E+FGKDWK I T+V TRT+VQIRTHAQKY +KL K
Sbjct:   60 GRWNEEEHRLFLQGVEKFGKDWKQISTVVLTRTVVQIRTHAQKYFLKLEK 109          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A835Z7M4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M4_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.930e-15
Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 50
            GRWT  EH  FL GL+  GK WK I +L++TRT+VQIRTHAQKY  KL+K
Sbjct:    4 GRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53          
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A0W8DBP4_PHYNI (LHY protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DBP4_PHYNI)

HSP 1 Score: 75.5 bits (184), Expect = 8.220e-15
Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKG 51
            GRWT  EH  FL GL+RFGK WK I +LV TRT+VQIRTHAQKYL K S+ 
Sbjct:  132 GRWTKREHELFLEGLQRFGKSWKKISSLVHTRTLVQIRTHAQKYLQKQSRA 182          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4ZZP8_PHYSP1.050e-1670.00Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
D7FXJ4_ECTSI2.290e-1661.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V9ZGA4_9STRA3.630e-1666.67Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A0N7L7R3_PLAHL6.970e-1670.59Protein n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
A0A7S3LKU2_9STRA1.610e-1564.00Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A067D317_SAPPC2.000e-1567.92Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
K0S452_THAOC4.390e-1567.31Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3XSC1_HETAK4.870e-1568.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z7M4_9STRA4.930e-1564.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A0W8DBP4_PHYNI8.220e-1568.63LHY protein n=9 Tax=Phytophthora TaxID=4783 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 1..47
e-value: 0.0045
score: 26.2
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 1..45
e-value: 8.4E-11
score: 41.9
NoneNo IPR availableGENE3D1.10.10.60coord: 2..49
e-value: 5.6E-15
score: 57.1
NoneNo IPR availablePANTHERPTHR12802:SF20MPN DOMAIN-CONTAINING PROTEIN CG4751coord: 2..50
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 2..50
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 2..47
e-value: 5.5E-12
score: 43.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..49
score: 16.966
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig90028contigS-dermatodea_contig90028:189..350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig90028.17094.1mRNA_S-dermatodea_contig90028.17094.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig90028 189..350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig90028.17094.1 ID=prot_S-dermatodea_contig90028.17094.1|Name=mRNA_S-dermatodea_contig90028.17094.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=54bp
GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK
GRPF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR009057Homeobox-like_sf