mRNA_S-dermatodea_contig90028.17094.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: G4ZZP8_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZZP8_PHYSP) HSP 1 Score: 75.1 bits (183), Expect = 1.050e-16 Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 150
GRWT EH FL GL+RFGK WK I +LV TRT+VQIRTHAQKYL K S+
Sbjct: 19 GRWTKREHELFLEGLQRFGKSWKKISSLVHTRTLVQIRTHAQKYLQKQSR 68
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 2.290e-16 Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKD-WKGIRTLVETRTIVQIRTHAQKYLIKLSKGRPF 162
GRWT EHH FL G+ RF ++ W GI TL+ TRT++QIRTHAQKY K+ KG PF
Sbjct: 13 GRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPF 67
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A1V9ZGA4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGA4_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.630e-16 Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKGRPF 162
GRWT EH FL GL R+GK WK I LV TRT+VQIRTHAQKYL K +K +PF
Sbjct: 81 GRWTKKEHELFLEGLRRYGKSWKHIANLVVTRTLVQIRTHAQKYLQKQNKSKPF 134
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A0N7L7R3_PLAHL (Protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7R3_PLAHL) HSP 1 Score: 77.8 bits (190), Expect = 6.970e-16 Identity = 36/51 (70.59%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKG 153
GRWT EH FL GL+RFGK WK I +LV TRT+VQIRTHAQKYL K S+G
Sbjct: 108 GRWTKREHELFLEGLQRFGKSWKKISSLVHTRTLVQIRTHAQKYLQKQSRG 158
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A7S3LKU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKU2_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.610e-15 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 150
GRWT EH RF+ GL+ +GK+WK I ++ETRTIVQIRTHAQKY K++K
Sbjct: 90 GRWTKAEHDRFVKGLDVYGKEWKKIAAMIETRTIVQIRTHAQKYFQKIAK 139
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A067D317_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D317_SAPPC) HSP 1 Score: 76.3 bits (186), Expect = 2.000e-15 Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKGRP 159
GRWT EH FL GLER+GK WK I LV TRT+VQIRTHAQKYL K +K P
Sbjct: 90 GRWTKKEHELFLEGLERYGKSWKHISNLVVTRTLVQIRTHAQKYLQKQNKASP 142
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: K0S452_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S452_THAOC) HSP 1 Score: 76.6 bits (187), Expect = 4.390e-15 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKGR 156
GRWT EH FL GLER GK WK I TL+++RT+VQIRTHAQKY KL+K R
Sbjct: 311 GRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKAR 362
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A7S3XSC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSC1_HETAK) HSP 1 Score: 75.9 bits (185), Expect = 4.870e-15 Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 150
GRW EH FL G+E+FGKDWK I T+V TRT+VQIRTHAQKY +KL K
Sbjct: 60 GRWNEEEHRLFLQGVEKFGKDWKQISTVVLTRTVVQIRTHAQKYFLKLEK 109
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A835Z7M4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M4_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.930e-15 Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSK 150
GRWT EH FL GL+ GK WK I +L++TRT+VQIRTHAQKY KL+K
Sbjct: 4 GRWTYSEHCLFLKGLDAHGKAWKKIASLIKTRTVVQIRTHAQKYFQKLAK 53
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Match: A0A0W8DBP4_PHYNI (LHY protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DBP4_PHYNI) HSP 1 Score: 75.5 bits (184), Expect = 8.220e-15 Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 1 GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKG 153
GRWT EH FL GL+RFGK WK I +LV TRT+VQIRTHAQKYL K S+
Sbjct: 132 GRWTKREHELFLEGLQRFGKSWKKISSLVHTRTLVQIRTHAQKYLQKQSRA 182 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig90028.17094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig90028.17094.1 >prot_S-dermatodea_contig90028.17094.1 ID=prot_S-dermatodea_contig90028.17094.1|Name=mRNA_S-dermatodea_contig90028.17094.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=54bp GRWTLGEHHRFLVGLERFGKDWKGIRTLVETRTIVQIRTHAQKYLIKLSKback to top mRNA from alignment at S-dermatodea_contig90028:189..350- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig90028.17094.1 ID=mRNA_S-dermatodea_contig90028.17094.1|Name=mRNA_S-dermatodea_contig90028.17094.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=162bp|location=Sequence derived from alignment at S-dermatodea_contig90028:189..350- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig90028:189..350- >mRNA_S-dermatodea_contig90028.17094.1 ID=mRNA_S-dermatodea_contig90028.17094.1|Name=mRNA_S-dermatodea_contig90028.17094.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=324bp|location=Sequence derived from alignment at S-dermatodea_contig90028:189..350- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |