prot_S-dermatodea_contig900.17092.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig900.17092.1
Unique Nameprot_S-dermatodea_contig900.17092.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length777
Homology
BLAST of mRNA_S-dermatodea_contig900.17092.1 vs. uniprot
Match: D7G6E0_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E0_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 1.340e-165
Identity = 288/365 (78.90%), Postives = 304/365 (83.29%), Query Frame = 0
Query:   25 QEGIVPAATNLSKLDDEDSMRACATVFALLSADPRGRARFVERKSALVSLFELLRSKDQGTQVICGKAVCNLVSCPDSQLAAVEAGAVPCLRQLAKLGVPEIEAAIAMTFLLMSGNSKCRSEVISTALPTVVYLSRSPNAEARCTCARTLGVLAWHDDSRGALSGVGVARALVGIIEDFSEGDEGQKDQLERCTRALYYLATDQSSAGCMVEAGTIRALSKVMEVGAVESVLGLVAAALRCLTQVASPKEASLXXXXXXXXXXXXXXXXXXXXXXXE---TANEEETARMAELVAEQGAGALVRRLVEAAGSIEAPTESTEATLYDCAVVVFNLAAAASGCAALQRDLVGERGVLPALATLAGVR 386
            +EGIVPA TNLSKLDDEDSMRACATVFALLSADPRGRA+FV+RKSALVSLF LLRS DQGTQVICGKAVCNLVSCPDSQL+AV AGAVPCLRQLAKLGV EIEA+IAM FLLMSGNSKCR EV STALPTVVYLSRSPN EARCTCARTLGVLAWHDDSR AL+GVGVARALVGIIED+SEGDE QKDQLE CTRALYYLATDQ SAGCMVEAGTIRALSKVMEVGA ESVL LVAAALRCLTQV +  E                          E      EE+  R+A+LVA QGAGALVRRLVEA+GS EAP +S EATLYDCAVVVFNLA +A+ CA LQRDLVGE GVLPALATLA V+
Sbjct:  905 EEGIVPATTNLSKLDDEDSMRACATVFALLSADPRGRAKFVQRKSALVSLFGLLRSTDQGTQVICGKAVCNLVSCPDSQLSAVGAGAVPCLRQLAKLGVSEIEASIAMAFLLMSGNSKCRMEVTSTALPTVVYLSRSPNFEARCTCARTLGVLAWHDDSRRALTGVGVARALVGIIEDYSEGDECQKDQLEMCTRALYYLATDQRSAGCMVEAGTIRALSKVMEVGATESVLPLVAAALRCLTQVPTRVETPAKDKDKEKHKDGTRMGASGDGDDAEERIATIEEDAPRIAQLVASQGAGALVRRLVEASGSAEAPADSREATLYDCAVVVFNLAESAASCAELQRDLVGEGGVLPALATLAEVK 1269          
BLAST of mRNA_S-dermatodea_contig900.17092.1 vs. uniprot
Match: F0Y3D4_AURAN (Vacuolar protein 8 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3D4_AURAN)

HSP 1 Score: 167 bits (424), Expect = 4.430e-39
Identity = 161/514 (31.32%), Postives = 237/514 (46.11%), Query Frame = 0
Query:   22 ASKQEGIVPAATNLSKLDDEDSMRACATVFALLSAD-PRGRARFVERKSALVSLFELLRSKDQGTQVICGKAVCNLVSCPDSQLAAVEAGAVPCLRQLAKLGVPEIEAAIAMTFLLMSGNSKCRSEVIST-ALPTVVYLSRSPNAEARCTCARTLGVLAWHDDS----RGALSGVGVARALVGIIEDFSEGDEGQKDQLERCTRALYYLATDQSSAGCMVEAGTIRALSKVMEVGAVESVLGLVAAALRCLTQVASPKEASLXXXXXXXXXXXXXXXXXXXXXXXETANEEETARMAELVAEQGAGALVRRLVEAAGSIE-------APTESTEATLYD-CAVVVFNLAAAASGCAALQR--DLVGERGVLPALATLAGVRSTRDLVMATISLLSNDPSNREEVIAQGGA-ELTLTLAGGLDDWTNQRTDVVTNAVCALFLMSRAPPVARERLKEGGKVTQFLANLSKRGGEVQKKVASDALGNLTRDVGMGIEEGTVAALISRSLEGPGDTDA 518
            A  +EG+V A + LS+L +E++MR CA++F  LSA  P GRA  VER+S L+ +F L+RS+D+ TQV+CGK  CNL+   DSQ  AV AGAV  L  L  LG PE E A A  + L++G+  CR E++    LP ++  +RSPN   R +C R L  LAW  +     R  L    +   LV ++E             + C  A    A +   AG    A    A +     G  + V+  +   +      AS                             E A        A L +   A A + +LVE  G++        A  +++ A +++ CA  ++++A         QR   ++ ++G L A+  L  +     L  AT+ LLS +P +RE ++A   A +L L LA   +D        V +     F +SR    ARE L   G V   L  LS+ G +      S+AL NL+     GIEEGTV+ LI+ +L G   T+A
Sbjct:  942 ALAKEGLVQACSVLSRLSEEETMRVCASIFCTLSAQGPAGRALLVERRSTLLDVFGLMRSRDRTTQVVCGKTACNLLGHVDSQQPAVRAGAVSVLTSLCTLGDPEAEVAAADAYFLIAGDEACRLEMVEAKVLPVLITNARSPNGPTRQSCLRVLAHLAWWKNVWKNVRAPLLTASIVPVLVVLVE-------------QTCGAAA---ALEAEPAGDADAAAPAAAPADEKPRG--DDVVQDLTLYIFTYMTFASEDHRVAMVRDDVVPALELLYRRLTLGGPPERARRVRMFVAAALRSLAAATAALDKLVED-GAVRLLCDMMCAEDDASNAEVFEHCARALYSVARE-------QRFNGVLLDQGALEAIPRLGALPECYALAAATLHLLSLEPPHREMIVADVAARDLLLRLAEAPED--PHAASTVQSCAQTFFWLSRCTAQAREELASAGLVP-LLIRLSRHGDDKVASSCSEALKNLSSGGSGGIEEGTVSTLIAMTLSGGPSTNA 1426          
BLAST of mRNA_S-dermatodea_contig900.17092.1 vs. uniprot
Match: A0A835YNZ3_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNZ3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 4.980e-23
Identity = 66/154 (42.86%), Postives = 84/154 (54.55%), Query Frame = 0
Query:   26 EGIVPAATNLSKLDDEDSMRACATVFALLSADPRGRARFVERKSALVSLFELLRSKDQGTQVICGKAVCNLVSCPDSQLAAVEAGAVPCLRQLAKLGVPEIEAAIAMTFLLMSGNSKCRSEVISTALPTVVYLSRSPNAEARCTCARTLGVLAW 179
            EG+V AAT+LS+L DE SMRACA  FA L+ADP GRAR   R++AL + F+LLR++D GT+ + G AV NL+                          P +E ++A      S  +     V    LPTVV+LSRSPN  AR  C R L  LAW
Sbjct:  640 EGLVAAATHLSRLPDEPSMRACAAAFAALTADPAGRARLAARRAALAAAFDLLRARDAGTRALVGAAVINLLRSGXXXXXXXXXXXXXXXXXXXXXXAPAVETSVASXXYXXSVGAAREDIVRGGGLPTVVFLSRSPNTAARWACVRALAALAW 793          
BLAST of mRNA_S-dermatodea_contig900.17092.1 vs. uniprot
Match: A0A7S3YJF8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJF8_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 1.590e-20
Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = 0
Query:   26 EGIVPAATNLSKL-DDEDSMRACATVFALLSADPRGRARFVERKSALVSLFELLR-SKDQGTQVICGKAVCNLVSCPDSQLAAVEAGAVPCLRQLAKLGVPEIEAAIAMTFLLMSGNSKCRSEV 147
            EG++ AA  LSK  DD ++  AC+ ++ +LS     R   + RK A  +LF LLR ++D   QV CGKA+CNL+SC DSQLA V  GAVP L  LA+LG    EA  A  F L+ G+++CR+ +
Sbjct:   35 EGVLTAAAALSKQKDDPETQLACSNIYGVLSGHAGARRALLGRKGAAAALFALLRHAQDHTAQVTCGKALCNLLSCRDSQLATVRKGAVPVLGWLARLGDAATEARCADAFFLLCGDAECRARL 158          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig900.17092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G6E0_ECTSI1.340e-16578.90Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ... [more]
F0Y3D4_AURAN4.430e-3931.32Vacuolar protein 8 n=1 Tax=Aureococcus anophageffe... [more]
A0A835YNZ3_9STRA4.980e-2342.86Vacuolar protein 8 (Fragment) n=1 Tax=Tribonema mi... [more]
A0A7S3YJF8_HETAK1.590e-2045.97Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 449..491
e-value: 490.0
score: 0.1
coord: 227..271
e-value: 10.0
score: 13.1
coord: 140..179
e-value: 27.0
score: 9.9
coord: 402..448
e-value: 5.6
score: 15.2
coord: 99..139
e-value: 8.5
score: 13.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 15..284
e-value: 6.3E-23
score: 83.1
coord: 301..520
e-value: 3.3E-9
score: 37.9
NoneNo IPR availablePANTHERPTHR15599RTDR1coord: 23..131
coord: 158..447
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 39..270
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 340..491

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig900contigS-dermatodea_contig900:8780..16532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig900.17092.1mRNA_S-dermatodea_contig900.17092.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig900 8780..18200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig900.17092.1 ID=prot_S-dermatodea_contig900.17092.1|Name=mRNA_S-dermatodea_contig900.17092.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=777bp
MQHKVLQPLILRVFRRRRIAIASKQEGIVPAATNLSKLDDEDSMRACATV
FALLSADPRGRARFVERKSALVSLFELLRSKDQGTQVICGKAVCNLVSCP
DSQLAAVEAGAVPCLRQLAKLGVPEIEAAIAMTFLLMSGNSKCRSEVIST
ALPTVVYLSRSPNAEARCTCARTLGVLAWHDDSRGALSGVGVARALVGII
EDFSEGDEGQKDQLERCTRALYYLATDQSSAGCMVEAGTIRALSKVMEVG
AVESVLGLVAAALRCLTQVASPKEASLKEGAGTAGGGEEGRGGGGRGGGG
ETANEEETARMAELVAEQGAGALVRRLVEAAGSIEAPTESTEATLYDCAV
VVFNLAAAASGCAALQRDLVGERGVLPALATLAGVRSTRDLVMATISLLS
NDPSNREEVIAQGGAELTLTLAGGLDDWTNQRTDVVTNAVCALFLMSRAP
PVARERLKEGGKVTQFLANLSKRGGEVQKKVASDALGNLTRDVGMGIEEG
TVAALISRSLEGPGDTDADDDVIGSSYVAPGISPPCIGGHGPGGGSSAEE
ASYKIQTVTFVKRTSGGGGDLPPPPEPPAIEGQGLSVPAPPHDLKDGMGE
EGDGDDPKAMEFAKIDVPEEYRTNNDEEVLAKMEQRKLASRSTNRDSSVK
YVEGGPRGGAAASGVDGDGNGSSIRFDGMENASSGHKLSSAKRGTLKKCT
SAPALAAEHGRSARMAAGAKAATAGGKRRSVDPKKGVLQRGWTRPGVVTE
GNSDGEGGGQAVLALDQQAAALGLYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold