prot_S-dermatodea_contig899.17073.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig899.17073.1
Unique Nameprot_S-dermatodea_contig899.17073.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length810
Homology
BLAST of mRNA_S-dermatodea_contig899.17073.1 vs. uniprot
Match: D8LMC1_ECTSI (RAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC1_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 3.690e-90
Identity = 267/582 (45.88%), Postives = 313/582 (53.78%), Query Frame = 0
Query:  272 HPEEGLREIGPLKFGSGAGGETVEEFSAGETPRQVRLSALLTRKLSARAGECKPMELAMAAWGLAVLGQRDEACLSAIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQGRVSWEWKEASSG---------NNGAKGSWKATIDPSCSADQDSAPRPAAELAATAAAAQKAE---------------------------------------AELANRGDGCVSTGGPSEDAGIGAEGIGGRLELGRGAGSEAGVAASSGVGQGGLDGEGGGSSGSFSCAPPRLIAQDSPSASVPEATASASPASPAGVESDGGVVTTVGGPGEAVDDAEGEERGQWSSDSEVQVASVVLAPQDLAMLSWGLSSLCQEWLPGQPAAYRSLAVLAKAARKCVGSFGPQDLSMVSLALARLSWDDPPLMRAMMAHTTETLRAFKPQELSNMAWACARLYVKDSNFWSSVQTQAKRMLAGPGMKAXXXXXXXXXLAVMGEADSVLLADLFRSAEAKRADLTVIDSHQLYQVYLLWKEDIPELWQELDEEFLLELKRRWTDNKERMKRSSFSHLEVSEV 805
            HPE GL E+GPL+FGSGA  +         TP + RL +LL  KLS RA ECKP ELAMAAWGLAVLG+RDE  LSA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     W+GRVSWEWK              +N   G WKATID + +        PA   A   A  ++                                         A + +     V+ GG +E   +    +GG                                        P      S S++    TA  +P   +GV             G+    A    R  WS  SEV+V SV+L PQDLAMLSWG SSL QE LP QPAAYR+L VLAKAAR+CVG+F PQD+SMVSLALAR+SWDDP LM+AM + T                             WS++Q QAKRML GPGM A         LAVMGEAD  LL +L RSA+A+R D T+I+SHQLYQVYLLW +D+PELW+ELD EFL+ LKRRWTDN++R KRSS SHLEVS+ 
Sbjct:    6 HPENGLGEVGPLRFGSGAREKGDTPPVPLGTPGESRLPSLLAGKLSERAMECKPRELAMAAWGLAVLGERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEPLQWRGRVSWEWKHGKKKKSRRGGKGHDNRTTGFWKATIDRTWAMRLPGGAPPARPAAMVMAEKERLAKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVDAEKDSVTEGGSTEWRSV--HRVGGA---------------------------------------PATSTTTSRSSAAASGTAEGAPHRFSGVXXXXXXXXXXXXXGQPFSAAALSSREHWSCASEVEVGSVILTPQDLAMLSWGFSSLSQECLPCQPAAYRALDVLAKAARECVGNFRPQDVSMVSLALARMSWDDPRLMKAMASRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSALQKQAKRMLDGPGMSAQEIANLAWALAVMGEADVELLEELLRSAQAQRGDFTLIESHQLYQVYLLWGKDMPELWKELDGEFLMALKRRWTDNQQRTKRSSCSHLEVSQT 546          
BLAST of mRNA_S-dermatodea_contig899.17073.1 vs. uniprot
Match: A0A6H5K364_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K364_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 4.900e-78
Identity = 244/446 (54.71%), Postives = 276/446 (61.88%), Query Frame = 0
Query:    1 PVHLPPDSEWNSLLQERLQRKLRKPKRLARVAAXXXXXXXXXXXXXXGAALSSTPKVASSPTTETGGTEMGMHDVSCGSDGADGEEIAREEAG--AASAGARVRVALGVGVTAGLG--------GHATGVA-EGIGEVGRDGHEGAGECQEEGSVFVRRGPPLKKSSPGGPFGASKARAWHAQQVVQSAVTPTQAMRAVLDRPLRANYVTVSTALNRVAKLKA-RRSPRDVITEEERKYLGVLLQVTEKLVASDMVNARNLAQLLWSVAKLGNPTACDGEFGRHPEEGLREIGPLKFGSGAGGETVEEFSAGETPRQVRLSALLTRKLSARAGECKPMELAMAAWGLAVLGQRDEACLSAIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWQGRVSWEWKEAS----SG------NNGAKGSWKATID 424
            P   P +SEW S+L+ERL+RKLRKP R  R  A               A  S  P  +S PT      +    DV       +  +  + E G  A +A A  R +      AG G        G+A  V  E + E    G  G       G V     PPLK+  PGGPFGASKA AWHAQQVVQSAVTP QAMRAVLDRPLR+NYV+VSTALNRVAKL A RR    +  EEE KYLG+LL+VTE+LV +D+VNARNLAQLLWS+AKLGNP A  GE   HPEEGL E+GPL+FGSGA  +          P + RL +LL  KLS RA ECKP ELAMAAWGLAVL +RDE  LSA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     W+GRVSWEWK+      SG      +N   G WKATID
Sbjct:   87 PTPAPAESEWESILRERLERKLRKPGRRKRARAAAT------------ARTSPNPTFSSPPTQ----WQQQQQDVESHFPANNDNQKKQSEVGGTAEAAAATPRFSGATTSEAGAGTEPETGTYGNAETVKKESLREEANQGRRGGARRAVRGRVSP---PPLKRRPPGGPFGASKAVAWHAQQVVQSAVTPLQAMRAVLDRPLRSNYVSVSTALNRVAKLAASRRRGGGLKGEEEPKYLGILLKVTEELVDADLVNARNLAQLLWSLAKLGNPEASSGEVLEHPEEGLGEVGPLRFGSGAREKGDTPPVPLGPPCEGRLPSLLAGKLSERAMECKPKELAMAAWGLAVLRERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEPLQWRGRVSWEWKQGKKKKKSGRVGKGHDNWTTGFWKATID 513          
BLAST of mRNA_S-dermatodea_contig899.17073.1 vs. uniprot
Match: A0A6H5K8K8_9PHAE (RAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K8_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 6.430e-30
Identity = 65/100 (65.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query:  704 MLAGPGMKAXXXXXXXXXLAVMGEADSVLLADLFRSAEAKRADLTVIDSHQLYQVYLLWKEDIPELWQELDEEFLLELKRRWTDNKERMKRSSFSHLEVS 803
            ML GPGM+A         LAVMGEAD  LL +L RSA+A+R++ T+I+SHQLYQVYLLW +D+PELW+ELD EFL+ LKRRWTDN++R KRSS SHLE+S
Sbjct:    1 MLDGPGMRAQEIANLAWALAVMGEADVELLQELLRSAQAQRSNFTLIESHQLYQVYLLWGKDMPELWKELDGEFLMALKRRWTDNQQRTKRSSCSHLEIS 100          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig899.17073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMC1_ECTSI3.690e-9045.88RAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K364_9PHAE4.900e-7854.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K8K8_9PHAE6.430e-3065.00RAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21228:SF40TRANSFORMING GROWTH FACTOR BETA REGULATOR 4coord: 31..405
NoneNo IPR availablePANTHERPTHR21228FAST LEU-RICH DOMAIN-CONTAININGcoord: 31..405
NoneNo IPR availablePANTHERPTHR21228:SF40TRANSFORMING GROWTH FACTOR BETA REGULATOR 4coord: 428..744
NoneNo IPR availablePANTHERPTHR21228FAST LEU-RICH DOMAIN-CONTAININGcoord: 428..744

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig899contigS-dermatodea_contig899:11236..24350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig899.17073.1mRNA_S-dermatodea_contig899.17073.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig899 11236..24350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig899.17073.1 ID=prot_S-dermatodea_contig899.17073.1|Name=mRNA_S-dermatodea_contig899.17073.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=810bp
PVHLPPDSEWNSLLQERLQRKLRKPKRLARVAAAAAATTAAPAPAPAGAA
LSSTPKVASSPTTETGGTEMGMHDVSCGSDGADGEEIAREEAGAASAGAR
VRVALGVGVTAGLGGHATGVAEGIGEVGRDGHEGAGECQEEGSVFVRRGP
PLKKSSPGGPFGASKARAWHAQQVVQSAVTPTQAMRAVLDRPLRANYVTV
STALNRVAKLKARRSPRDVITEEERKYLGVLLQVTEKLVASDMVNARNLA
QLLWSVAKLGNPTACDGEFGRHPEEGLREIGPLKFGSGAGGETVEEFSAG
ETPRQVRLSALLTRKLSARAGECKPMELAMAAWGLAVLGQRDEACLSAIA
KEISLRAQQFQGKELGNVVWAFAVLDYRDKAMLDAVSSVLSPEPLRWQGR
VSWEWKEASSGNNGAKGSWKATIDPSCSADQDSAPRPAAELAATAAAAQK
AEAELANRGDGCVSTGGPSEDAGIGAEGIGGRLELGRGAGSEAGVAASSG
VGQGGLDGEGGGSSGSFSCAPPRLIAQDSPSASVPEATASASPASPAGVE
SDGGVVTTVGGPGEAVDDAEGEERGQWSSDSEVQVASVVLAPQDLAMLSW
GLSSLCQEWLPGQPAAYRSLAVLAKAARKCVGSFGPQDLSMVSLALARLS
WDDPPLMRAMMAHTTETLRAFKPQELSNMAWACARLYVKDSNFWSSVQTQ
AKRMLAGPGMKAQEIANLAWSLAVMGEADSVLLADLFRSAEAKRADLTVI
DSHQLYQVYLLWKEDIPELWQELDEEFLLELKRRWTDNKERMKRSSFSHL
EVSEVRKILR
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