prot_S-dermatodea_contig8956.17039.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig8956.17039.1
Unique Name	prot_S-dermatodea_contig8956.17039.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	224

Homology

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BLAST of mRNA_S-dermatodea_contig8956.17039.1 vs. uniprot
Match: A0A6H5KAJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAJ9_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 6.890e-56
Identity = 116/235 (49.36%), Postives = 146/235 (62.13%), Query Frame = 0

Query:    1 QLDLVLFNYNEGSESGPDLVGSAFLVELIGNPASNTTGTVNQLAVTSSAATVQSVGGDPLP----------------IIGTGRDLFCFQNDPYECEGYLGDA----TIELAGTLRCSACEGGAFTGIGSAQGAPTLAPVEFDDDDGLSKMGQERAQGGTPSPTPVGGLLSSSGSASGSVDGAALDATSDAELFGVTGSMRWVVVGLIVGLSGAVLVCLCIVTVCRRVPGGPGKRA 215
            +L+L+ FN+N GS S PDLVGSA L+E  G PASNTTG + QL  ++S+A                           ++G   D++CFQNDPY+CE Y GD+     ++L GT+RC+ C+G AFTGIGSA GAPT AP+  DDDDGLS+MGQERAQGGTPSP  V G                 +  S+ EL G TG+MRWVVVGLI  L  A+L+CLC++TVCRR  G  G+RA
Sbjct:  378 ELELLQFNWNGGSASSPDLVGSALLLERTGTPASNTTGPLEQLDPSTSSAXXXXXXXXXXXXXXXXXXXXXXTAGSTLVGVATDIYCFQNDPYDCEAYFGDSDGEIAVQLTGTVRCNVCQGSAFTGIGSAAGAPTPAPIVTDDDDGLSQMGQERAQGGTPSPAGVDGSXXXXXXXXXXXXXVP-EEESEPELLGTTGTMRWVVVGLIAALGSALLICLCMLTVCRRRKG-RGERA 610

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BLAST of mRNA_S-dermatodea_contig8956.17039.1 vs. uniprot
Match: D7G311_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G311_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 1.180e-42
Identity = 86/169 (50.89%), Postives = 109/169 (64.50%), Query Frame = 0

Query:    1 QLDLVLFNYNEGSESGPDLVGSAFLVELIGNPASNTTGTVNQLAVTSSAATVQSVGGDPLP------------------IIGTGRDLFCFQNDPYECEGYLGDA----TIELAGTLRCSACEGGAFTGIGSAQGAPTLAPVEFDDDDGLSKMGQERAQGGTPSPTPVGG 147
            +L+L+ FN+N GS S PDLVGSA L+E  G PASNTTG + Q+  ++S+                              ++G  RD++CFQNDPY+CE Y GD+     ++L GT+RC+AC+G AFTGIGSA GAPT AP+  DDDDGLS+MGQERAQGGTPSP  V G
Sbjct:  399 ELELLQFNWNGGSSSSPDLVGSALLLERTGTPASNTTGPLEQVDPSTSSXXXXXXXXXXXXXXXXXXXXXXXXXTAGSTLVGVARDIYCFQNDPYDCEAYFGDSDGEIAVQLTGTVRCNACQGSAFTGIGSAAGAPTPAPIVADDDDGLSQMGQERAQGGTPSPAGVDG 567

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig8956.17039.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig8956.17039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KAJ9_9PHAE	6.890e-56	49.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G311_ECTSI	1.180e-42	50.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 205..224
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 181..204
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..180
None	No IPR available	TMHMM	TMhelix		coord: 182..204

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig8956	contig	S-dermatodea_contig8956:6227..7992 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig8956.17039.1	mRNA_S-dermatodea_contig8956.17039.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig8956 6227..7992 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig8956.17039.1 ID=prot_S-dermatodea_contig8956.17039.1|Name=mRNA_S-dermatodea_contig8956.17039.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=224bp
QLDLVLFNYNEGSESGPDLVGSAFLVELIGNPASNTTGTVNQLAVTSSAA
TVQSVGGDPLPIIGTGRDLFCFQNDPYECEGYLGDATIELAGTLRCSACE
GGAFTGIGSAQGAPTLAPVEFDDDDGLSKMGQERAQGGTPSPTPVGGLLS
SSGSASGSVDGAALDATSDAELFGVTGSMRWVVVGLIVGLSGAVLVCLCI
VTVCRRVPGGPGKRAGRGAGGGGG