prot_S-dermatodea_contig8928.17018.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8928.17018.1
Unique Nameprot_S-dermatodea_contig8928.17018.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length438
Homology
BLAST of mRNA_S-dermatodea_contig8928.17018.1 vs. uniprot
Match: A0A6H5JTA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTA4_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 2.060e-91
Identity = 214/379 (56.46%), Postives = 245/379 (64.64%), Query Frame = 0
Query:   34 EVLDLRARRAELEQRLAAARSALSSARERREFMEEEAEQAREYGKKLAQEMSRLARIAQALPPDQSSSLEKLRRLAATLSEVEQQEKGVLEDGQAQEDALRAEIDEFTGRQKGS--------------QPPPGPDAASASESTSAPAAGRHSEVENAQGRGGAAGGRARSGGA-TLENSADDPLAAAEAPDRDRGEGGENGGRRARGDPAG------VKRVAVVA---------------RAAKKKTP--EGKALLAEGLHRIEAAHEEAAAEREAVASRLSRLRLAVARRQREEDATPGHAELLQYLLRFEELGQHALEREKQLRRCRTERSTVAQTREFLANEARLLEAIASGAEEAARGGKGARETYLRQLEGILQ 374
            EVL LR R AELE+RL AAR AL+SARERREFMEEEAEQAR+YG KLAQEM+RL RI + LPPD+S+SLEKLRRL ATL+E+E+QE+  LE G+A+E ALR EI EFTG   G                     DAA A+    APA           G GG   G+ R GG   LE + DDPLAA   P   + E     G      PA       V R AVV                RA  +K P  EGKAL AEGLHRIEAA+E A AERE  A+RLSRLRLAVARRQREEDA  GHAELLQYLLRFEELGQH+LER++QLRRCR ER  ++ TRE LA +ARLLE IA G EEA+ GGKG RE YLRQ++GI++
Sbjct:    8 EVLSLRERGAELEERLQAARIALTSARERREFMEEEAEQARDYGDKLAQEMARLGRITRTLPPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRTEIAEFTGETTGDGXXXXXXXXXXXXXXXXXXXDAAPAT--AGAPA-----------GEGGGRAGKGREGGGFVLEKAVDDPLAAMAEPQEHQEEDKSGAGNIVGAVPAAGVGTVSVLRTAVVLGXXXXXXXXXXXPAERANHRKKPALEGKALFAEGLHRIEAAYEVAVAEREESAARLSRLRLAVARRQREEDAALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERLMLSLTRELLAKQARLLETIAGGVEEASTGGKGVREAYLRQIKGIVE 373          
BLAST of mRNA_S-dermatodea_contig8928.17018.1 vs. uniprot
Match: D7G045_ECTSI (Similar to fidipidine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G045_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 4.220e-86
Identity = 206/432 (47.69%), Postives = 239/432 (55.32%), Query Frame = 0
Query:   66 MEEEAEQAREYGKKLAQEMSRLARIAQALPPDQSSSLEKLRRLAATLSEVEQQEKGVLEDGQAQEDALRAEIDEFTGRQKGSQPPPGPDAASASESTSAPAAGRHSEVENAQGRGGAAGGRARSGGAT---------------------------------LENSADDPLAAAEAPDRDRGEGGENGGRRARGD---------------------------PAGVKRVAVVARAAKKKTPEGKALLAEGLHRIEAAHEEAAAEREAVASRLSRLRLAVARRQREEDATPGHAELLQYLLRFEELGQHALEREKQLRRCRTERSTVAQTREFLANEARLLEAIASGAEEAARGGKGARETYLRQLEGILQEVEDSLANQTHRLDAARSRRRXXXXXXXXXSEERKRFLVGSKELTQECYRHEALTAHLVLMRR 437
            MEEEAEQAR+YG KLAQEM+RL RI + L PD+S+SLEKLRRL ATL+E+E+QE+  LE G+A+E ALRAEI EFTG                               E  +  GG   G      A                                  LE + DDPLA                                                  PA  K     A   KK   EGKAL AEGLHRIEAA+E AAAERE  A+RLSRLRLAVARRQREED   GHAELLQYLLRFEELGQH+LER++QLRRCR ERST++ TRE LA +ARLLE IA G EEA++GGKG RE YLRQ++GI++ VEDSL +QT  LD  R RR           E+RKRF  G+KEL+ ECYR+E+L AHL LMRR
Sbjct:    1 MEEEAEQARDYGNKLAQEMARLGRITRTLAPDESASLEKLRRLVATLTEIERQEQAALEQGKAREAALRAEIAEFTG-------------------------------ETTEDVGGGGDGLGEKPAAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVLEKTVDDPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAERK-----ANHRKKPALEGKALFAEGLHRIEAAYEVAAAEREESAARLSRLRLAVARRQREEDVALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERSTLSLTRELLATQARLLETIAGGVEEASKGGKGVREAYLRQIKGIVESVEDSLEDQTRLLDNVRRRRHVAEELQASVREDRKRFFAGTKELSDECYRYESLNAHLALMRR 396          
BLAST of mRNA_S-dermatodea_contig8928.17018.1 vs. uniprot
Match: A0A6J1TL23_FRAOC (Coiled-coil domain-containing protein 93 n=3 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TL23_FRAOC)

HSP 1 Score: 63.5 bits (153), Expect = 4.130e-7
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = 0
Query:  266 AAEREAVAS---RLSRLRLAVARRQREEDATPGHAELLQYLLRFEELGQHALEREKQLRRCRTERSTVAQTREFLANEARLLEAIASGAEEAARGGKGARETYLRQLEGILQEVEDSLANQTHRLDAARSRRRXXXXXXXXXSEERKRFLVGSKELTQECYRHEALTAHL 432
            A+E+EA+ S   RL+R   A A  QR+ D  PG AEL QY  RF EL      + K+ ++  T  +T++ T+ ++  E  LL++I     EA       RE +++Q EGI++ V+ +      R +  R RR           E  + ++   ++LT EC ++  L A L
Sbjct:  436 ASEKEALVSVRLRLARATRAAASLQRQLDDVPGRAELAQYQRRFLELYSQVAAKHKETKQFYTLYNTLSDTKLYMEKELNLLDSILENYHEAL-SSPSMREQFIKQFEGIVENVKQNKMKIEQRRNEERMRRDKLNKQQVALLELERSYVAAVRQLTVECRKNAVLLAQL 604          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8928.17018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JTA4_9PHAE2.060e-9156.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G045_ECTSI4.220e-8647.69Similar to fidipidine n=1 Tax=Ectocarpus siliculos... [more]
A0A6J1TL23_FRAOC4.130e-731.18Coiled-coil domain-containing protein 93 n=3 Tax=F... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 366..407
NoneNo IPR availableCOILSCoilCoilcoord: 35..83
NoneNo IPR availablePANTHERPTHR16441:SF0COILED-COIL DOMAIN-CONTAINING PROTEIN 93coord: 243..432
IPR039116Coiled-coil domain-containing protein 93PANTHERPTHR16441FIDIPIDINEcoord: 243..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8928contigS-dermatodea_contig8928:377..2721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8928.17018.1mRNA_S-dermatodea_contig8928.17018.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8928 375..2721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8928.17018.1 ID=prot_S-dermatodea_contig8928.17018.1|Name=mRNA_S-dermatodea_contig8928.17018.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=438bp
MQEDASPRDAREADQGNHDAQEVTENIPKKANQEVLDLRARRAELEQRLA
AARSALSSARERREFMEEEAEQAREYGKKLAQEMSRLARIAQALPPDQSS
SLEKLRRLAATLSEVEQQEKGVLEDGQAQEDALRAEIDEFTGRQKGSQPP
PGPDAASASESTSAPAAGRHSEVENAQGRGGAAGGRARSGGATLENSADD
PLAAAEAPDRDRGEGGENGGRRARGDPAGVKRVAVVARAAKKKTPEGKAL
LAEGLHRIEAAHEEAAAEREAVASRLSRLRLAVARRQREEDATPGHAELL
QYLLRFEELGQHALEREKQLRRCRTERSTVAQTREFLANEARLLEAIASG
AEEAARGGKGARETYLRQLEGILQEVEDSLANQTHRLDAARSRRRAAEEN
QQSASEERKRFLVGSKELTQECYRHEALTAHLVLMRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039116CCDC93