prot_S-dermatodea_contig8913.17009.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8913.17009.1
Unique Nameprot_S-dermatodea_contig8913.17009.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length88
Homology
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Match: D7G7I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I2_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.210e-34
Identity = 67/107 (62.62%), Postives = 74/107 (69.16%), Query Frame = 0
Query:    3 YRRIACLKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQEDGDD---------------GDE------AVDFRPRMFQRAFLLRDVQWATWSSTIGWPVQ 88
            YRRIA LKGHSSRV HLDWTEDGRFVHTCGQDY +LHW+ILPP     GDD               GDE      A + RPR+F+RAFL+R+  WATWSSTIGWPVQ
Sbjct: 1478 YRRIAHLKGHSSRVLHLDWTEDGRFVHTCGQDYHLLHWDILPPSSHRQGDDAVRDGGAGRDACNGGGDEEDDEAFAGESRPRIFKRAFLVRNEPWATWSSTIGWPVQ 1584          
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Match: A0A6H5JER7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.860e-33
Identity = 66/107 (61.68%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    3 YRRIACLKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQEDGD----DGDE-----------------AVDFRPRMFQRAFLLRDVQWATWSSTIGWPVQ 88
            YRRIA LKGHSSRV HLDWTEDGRFVHTCGQDY +LHW+ILPP     GD    DG E                 A + RPR+F+RAFL+R+  WATWSSTIGWPVQ
Sbjct:  614 YRRIAHLKGHSSRVLHLDWTEDGRFVHTCGQDYHLLHWDILPPSSHRQGDGAARDGGEDRDASNGXXXXXXDEAFAGESRPRIFKRAFLVRNEPWATWSSTIGWPVQ 720          
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Match: G0QVG1_ICHMG (EF-hand domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QVG1_ICHMG)

HSP 1 Score: 61.6 bits (148), Expect = 4.230e-9
Identity = 27/80 (33.75%), Postives = 45/80 (56.25%), Query Frame = 0
Query:    9 LKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQEDGDDGDEAVDFRPRMFQRAFLLRDVQWATWSSTIGWPVQ 88
            +K HSS + H+D++ DG ++H+  Q Y++L W+                V+   ++   A  L+D  WATW++T+GWPVQ
Sbjct: 1989 MKKHSSAITHIDFSRDGNYIHSTCQAYELLFWD----------------VNIGKQLTSGASHLKDEMWATWTATLGWPVQ 2052          
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Match: A0A835YP67_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP67_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.000e-8
Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    3 YRRIACLKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQEDGDDGDEAVDFR-PRMFQRAFLLRDVQWATWSSTIGWPVQ 88
            YRR    +GH+S +  +D++ DG ++ +     ++L+W         D     EAV +  P     AF LRD +W+TW+ST+GWPV+
Sbjct: 1443 YRRAGVCRGHTSEICSVDFSSDGHWLQSSDASKELLYWHGPHASKLRD-----EAVWYMGPNAVSHAFELRDEEWSTWTSTLGWPVR 1524          
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Match: A0A7R9W6B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6B9_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.410e-7
Identity = 29/82 (35.37%), Postives = 43/82 (52.44%), Query Frame = 0
Query:    7 ACLKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQEDGDDGDEAVDFRPRMFQRAFLLRDVQWATWSSTIGWPVQ 88
            A   GHSS + H+D+T D +F+ +    Y++L W         D + G++           A  LRD +WATW+ T+GWPVQ
Sbjct:   70 ATCSGHSSYITHIDFTADSKFLQSNCGAYELLFW---------DAETGEQDPS-------GATNLRDAEWATWTCTLGWPVQ 135          
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Match: A0A0V0QU31_PSEPJ (WD40-repeat-containing domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QU31_PSEPJ)

HSP 1 Score: 55.8 bits (133), Expect = 4.580e-7
Identity = 26/80 (32.50%), Postives = 42/80 (52.50%), Query Frame = 0
Query:    9 LKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQEDGDDGDEAVDFRPRMFQRAFLLRDVQWATWSSTIGWPVQ 88
            L  H S + H+D++ D  ++H+   DY++L W++             +   F P     A   RD +WATW++T+GWPVQ
Sbjct: 2271 LYKHHSYITHIDFSTDSSYLHSTSGDYELLFWDL-------------DTKKFNP---SGASATRDEEWATWNTTLGWPVQ 2334          
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Match: G0QST4_ICHMG (HELP domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QST4_ICHMG)

HSP 1 Score: 54.3 bits (129), Expect = 1.550e-6
Identity = 26/84 (30.95%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    5 RIACLKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQEDGDDGDEAVDFRPRMFQRAFLLRDVQWATWSSTIGWPVQ 88
            ++  L+ HSS + H+D+++DG  +H+    Y++L+W I                +   ++   A  LR+  WATW++T+GWPVQ
Sbjct:  712 KVKPLRKHSSYITHIDFSQDGNVLHSNCGAYELLYWNI----------------NQAKQITSGATSLRNEFWATWTATLGWPVQ 779          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8913.17009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G7I2_ECTSI2.210e-3462.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JER7_9PHAE1.860e-3361.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
G0QVG1_ICHMG4.230e-933.75EF-hand domain-containing protein n=1 Tax=Ichthyop... [more]
A0A835YP67_9STRA2.000e-834.48SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7R9W6B9_9STRA1.410e-735.37Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A0V0QU31_PSEPJ4.580e-732.50WD40-repeat-containing domain n=1 Tax=Pseudocohnil... [more]
G0QST4_ICHMG1.550e-630.95HELP domain-containing protein n=1 Tax=Ichthyophth... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 2..41
e-value: 0.0044
score: 26.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 9..42
score: 10.575
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..88
e-value: 6.1E-13
score: 50.1
NoneNo IPR availablePANTHERPTHR13720:SF33ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 6coord: 4..88
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 4..88
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 9..50
score: 9.362
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8913contigS-dermatodea_contig8913:1722..1985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8913.17009.1mRNA_S-dermatodea_contig8913.17009.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8913 1722..1985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8913.17009.1 ID=prot_S-dermatodea_contig8913.17009.1|Name=mRNA_S-dermatodea_contig8913.17009.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=88bp
MCYRRIACLKGHSSRVHHLDWTEDGRFVHTCGQDYQVLHWEILPPPPQED
GDDGDEAVDFRPRMFQRAFLLRDVQWATWSSTIGWPVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf