prot_S-dermatodea_contig8905.17002.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8905.17002.1
Unique Nameprot_S-dermatodea_contig8905.17002.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length101
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8905.17002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 56..90
e-value: 1.9
score: 17.5
coord: 21..55
e-value: 0.092
score: 21.9
NoneNo IPR availablePFAMPF13432TPR_16coord: 37..90
e-value: 9.6E-7
score: 29.4
NoneNo IPR availablePANTHERPTHR44216FAMILY NOT NAMEDcoord: 3..89
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..100
e-value: 3.1E-24
score: 87.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..100
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..101
score: 19.703

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8905contigS-dermatodea_contig8905:7267..8287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8905.17002.1mRNA_S-dermatodea_contig8905.17002.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8905 7267..8287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8905.17002.1 ID=prot_S-dermatodea_contig8905.17002.1|Name=mRNA_S-dermatodea_contig8905.17002.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=101bp
QDFDGAEEHYRKAISLHWRSPDAHYNLGCLLQHQKDNIAEAEKQYRHAIK
CDPKHGLAQYNLGWVLEKVKEDLAGAEKCYRAAIEADPEDKDASRRLAKV
I
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom