prot_S-dermatodea_contig88709.16985.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig88709.16985.1
Unique Nameprot_S-dermatodea_contig88709.16985.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length44
Homology
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BLAST of mRNA_S-dermatodea_contig88709.16985.1 vs. uniprot
Match: A0A6H5JPT0_9PHAE (Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT0_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.920e-18
Identity = 36/44 (81.82%), Postives = 38/44 (86.36%), Query Frame = 0 
Query:    1 WDKDVCLNFTDRCLSFLKDNVDEGPRYSFKYLDPFDELVLELIG 44
            WDKDVCLNF DRCLSFLKDNVDEG RYSFKYL+PFD L LE + 
Sbjct:  239 WDKDVCLNFADRCLSFLKDNVDEGLRYSFKYLEPFDHLTLEQLA 282
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BLAST of mRNA_S-dermatodea_contig88709.16985.1 vs. uniprot
Match: D8LT56_ECTSI (Decapping nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT56_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.060e-17
Identity = 36/44 (81.82%), Postives = 38/44 (86.36%), Query Frame = 0 
Query:    1 WDKDVCLNFTDRCLSFLKDNVDEGPRYSFKYLDPFDELVLELIG 44
            WDKDVCLNF DRCLSFLKDNVDEG RYSFKYL+PFD L LE + 
Sbjct:  363 WDKDVCLNFADRCLSFLKDNVDEGLRYSFKYLEPFDHLTLEQLA 406
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig88709.16985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPT0_9PHAE4.920e-1881.82Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D8LT56_ECTSI1.060e-1781.82Decapping nuclease n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig88709contigS-dermatodea_contig88709:169..300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig88709.16985.1mRNA_S-dermatodea_contig88709.16985.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig88709 169..300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig88709.16985.1 ID=prot_S-dermatodea_contig88709.16985.1|Name=mRNA_S-dermatodea_contig88709.16985.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=44bp
WDKDVCLNFTDRCLSFLKDNVDEGPRYSFKYLDPFDELVLELIG
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