prot_S-dermatodea_contig8829.16956.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8829.16956.1
Unique Nameprot_S-dermatodea_contig8829.16956.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length242
Homology
BLAST of mRNA_S-dermatodea_contig8829.16956.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 1.290e-57
Identity = 127/264 (48.11%), Postives = 152/264 (57.58%), Query Frame = 0
Query:    1 MQLVALTDRISRIREDLIARGLRPVVVLGGDLNSVPRGPVRYLLREVIGPESELWSNVETFQWGDRLFDEVASPKAKTPGSEGQKNGGEKPENGDGATPSPAAIKSNNAVDDLPNLSAG----SAPGRPLCP-PALPGVPYMRLQLGLELASGMPAFTNFTPGFTETLDYVFIEGGAGGEGRXXXXXXXXXXXXXXXXXXXALLAVERAP------------------APVPEEGTLRAITPGLPCEAFPSDHISLVVDLAFSA 241
            MQLV L +RISR+R+DL+ARGLRP V+LGGDLNS P GPVRYL+ ++IGP+S+LW N+ TF+WGDR FDE+ +                     D    S A+ + NNA ++  N +A     S  G    P P LP VPY+R    L+LASG PAFTNFTP FT+TLDYVFIEG     G                    A+LAVE A                   AP+PEEG LRA TPGLP E FPSDH+SLVVDLA SA
Sbjct:  470 MQLVTLVERISRVRKDLLARGLRPAVILGGDLNSPPDGPVRYLMGDLIGPDSDLWENMGTFKWGDRFFDELPTTSGXXXXXXXXXXXXXXSRIPDEKA-STASPRPNNATNNNDNETARASHPSVAGSKAKPSPFLPNVPYLRTPFDLQLASGTPAFTNFTPDFTDTLDYVFIEGAGADSGTPTTAAE-------------AVLAVEGAXXXXXXXXXXXXXXXXXXVAPMPEEGPLRATTPGLPSETFPSDHVSLVVDLALSA 719          
BLAST of mRNA_S-dermatodea_contig8829.16956.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 4.390e-42
Identity = 94/182 (51.65%), Postives = 113/182 (62.09%), Query Frame = 0
Query:    1 MQLVALTDRISRIREDLIARGLRPVVVLGGDLNSVPRGPVRYLLREVIGPESELWSNVETFQWGDRLFDEVASPKAKTPGSEGQKNGGEKPEN----GDGATPSPAAIKS-NNAVDDLPNLSAGSAPGRPLCP-PALPGVPYMRLQLGLELASGMPAFTNFTPGFTETLDYVFIEGGAGGEG 176
            MQLV L +RISR+R+DL+ARGLRP VVLGGDLNS P GPVRYL+ ++IGP+S+LW NV TF+WGDR FDE+ +                 P +    G  +T SP    + NN  ++    S  S  G    P P L  VP +R  L L+LASG PAFTNFTP FTETLDYVFIEG     G
Sbjct:  640 MQLVTLVERISRVRKDLLARGLRPAVVLGGDLNSTPGGPVRYLMGDLIGPDSDLWENVGTFKWGDRFFDELPTTSGAXXXXXXXXXXXXSPTSRIPDGKASTASPRPNNATNNNDNETTRASHHSVAGSKAKPSPFLRNVPCLRTPLDLQLASGTPAFTNFTPEFTETLDYVFIEGAGADNG 821          
BLAST of mRNA_S-dermatodea_contig8829.16956.1 vs. uniprot
Match: A0A836CIF3_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.730e-19
Identity = 75/250 (30.00%), Postives = 106/250 (42.40%), Query Frame = 0
Query:    1 MQLVALTDRISRIREDLIARGLRPVVVLGGDLNSVPRGPVRYLLREVIGPESELWSNVETFQWGDRLFDEVASPKAKTPGSEGQKNGGEKPENGDGATPSPAAIKSNNAVDDLPNLSAGSAP-----------GRPLCPPALPGVPYMRLQLGLELASGMPAFTNFTPGFTETLDYVFIEGGAGGEGRXXXXXXXXXXXXXXXXXXXALLAVERAPAPVPEEGTLRAITPGLPCEAFPSDHISLVVDLAF 239
            +Q+VAL + +  IRE L++ G    VV+ GD+NS P   +RYL  + +  E  +W +V  F+WG+R F    S KAK    +G  +                                               G P+       +P + L L L  ASG P +TNFTP FT+TLDY+F +                           +  AV  AP  VP E  LRAIT GLP   +PSDH+++V D+ +
Sbjct:  553 IQMVALMNAVQGIRERLLSEGQEVGVVVCGDMNSTPLTAIRYLEGDTLSAEHAVWRHVRAFRWGERYF---KSAKAKVAAEDGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGPVS-----AIPTVALPLPLTNASGYPPYTNFTPAFTDTLDYIFAD-------------------------TDSFEAVSSAP--VPPEAELRAITVGLPYRGYPSDHVAVVADIRY 767          
BLAST of mRNA_S-dermatodea_contig8829.16956.1 vs. uniprot
Match: W7T5B9_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5B9_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.040e-11
Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 0
Query:    1 MQLVALTDRISRIREDLIAR-GLRPVVVLGGDLNSVPR-GPVRYLLREVIGPESELWSNVETFQWGDRLFD-------EVASPKAKTPGSEGQKNGGEKPENGDGATPSPAAIKSNNAVDDLPNLSAGSAP-------------GRPLCPPALPG--VPYMRLQLGLELASGMPAFTNFTPGFTETLDYVFIE 169
            MQ+  L   ++  + ++  + G+RP +VL GDLNS P    +RYL  E IGPE E+W ++  F WG R  +         A+  A     EG+K GGE  E GDG   +    + +   + L  LS+ + P              +     A  G  +P + L      A G+P FTN+  GF ETLDY+F+E
Sbjct:   38 MQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKK-GGE--EGGDGKAVAVDVGRESRGRETL--LSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLE 225          
BLAST of mRNA_S-dermatodea_contig8829.16956.1 vs. uniprot
Match: W7TNA6_9STRA (Endonuclease/exonuclease/phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA6_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.960e-11
Identity = 63/193 (32.64%), Postives = 92/193 (47.67%), Query Frame = 0
Query:    1 MQLVALTDRISRIREDLIAR-GLRPVVVLGGDLNSVPR-GPVRYLLREVIGPESELWSNVETFQWGDRLFD-------EVASPKAKTPGSEGQKNGGEKPENGDGATPSPAAIKSNNAVDDLPNLSAGSAP-------------GRPLCPPALPG--VPYMRLQLGLELASGMPAFTNFTPGFTETLDYVFIE 169
            MQ+  L   ++  + ++  + G+RP +VL GDLNS P    +RYL  E IGPE E+W ++  F WG R  +         A+  A     EG+K GGE  E GDG   +    + +   + L  LS+ + P              +     A  G  +P + L      A G+P FTN+  GF ETLDY+F+E
Sbjct:   79 MQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKK-GGE--EGGDGKAVAVDVGRESRGRETL--LSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLE 266          
BLAST of mRNA_S-dermatodea_contig8829.16956.1 vs. uniprot
Match: K8YU24_NANGC (2-phosphodiesterase 12-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YU24_NANGC)

HSP 1 Score: 72.4 bits (176), Expect = 3.530e-11
Identity = 64/205 (31.22%), Postives = 90/205 (43.90%), Query Frame = 0
Query:    2 QLVALTDRISRIREDLIAR--------GLRPVVVLGGDLNSVPR-GPVRYLLREVIGPESELWSNVETFQWGDRLFD-------EVASPKAKTPGSEGQKNGGEKPENGDG---------------------ATPSPAAIKSNNAVDDLPNLSAGSAPGRPLCPPALPGVPYMRLQLGLELASGMPAFTNFTPGFTETLDYVFIE 169
            Q+V L   ++ +  ++ AR        G+RP +VL GDLNS P    +RYL  E IGPE E+W ++  F WG R  +         A+  A     EG+K GGE  E GDG                     ATP   A +      +     + ++ G          +P + L      A G+P FTN+  GF ETLDY+F+E
Sbjct:  100 QIVLLRLEMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKK-GGE--EGGDGKAVAVDDGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDV--------IPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLE 293          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8829.16956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FYP3_ECTSI1.290e-5748.11Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JRV9_9PHAE4.390e-4251.65Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A836CIF3_9STRA1.730e-1930.00Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
W7T5B9_9STRA2.040e-1132.64Endonuclease/exonuclease/phosphatase n=1 Tax=Nanno... [more]
W7TNA6_9STRA2.960e-1132.64Endonuclease/exonuclease/phosphatase n=2 Tax=Monod... [more]
K8YU24_NANGC3.530e-1131.222-phosphodiesterase 12-like protein n=1 Tax=Nannoc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12121:SF372',5'-PHOSPHODIESTERASE 12coord: 1..237
NoneNo IPR availablePANTHERPTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4coord: 1..237
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 2..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8829contigS-dermatodea_contig8829:774..5812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8829.16956.1mRNA_S-dermatodea_contig8829.16956.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8829 714..6454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8829.16956.1 ID=prot_S-dermatodea_contig8829.16956.1|Name=mRNA_S-dermatodea_contig8829.16956.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=242bp
MQLVALTDRISRIREDLIARGLRPVVVLGGDLNSVPRGPVRYLLREVIGP
ESELWSNVETFQWGDRLFDEVASPKAKTPGSEGQKNGGEKPENGDGATPS
PAAIKSNNAVDDLPNLSAGSAPGRPLCPPALPGVPYMRLQLGLELASGMP
AFTNFTPGFTETLDYVFIEGGAGGEGRGGGVGGSVSCRVAAGAGSGALLA
VERAPAPVPEEGTLRAITPGLPCEAFPSDHISLVVDLAFSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf