prot_S-dermatodea_contig8153.16353.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8153.16353.1
Unique Nameprot_S-dermatodea_contig8153.16353.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length706
Homology
BLAST of mRNA_S-dermatodea_contig8153.16353.1 vs. uniprot
Match: D8LPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM5_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 1.620e-140
Identity = 333/826 (40.31%), Postives = 415/826 (50.24%), Query Frame = 0
Query:    1 VYRSYWRQSEVSLQDLHAFVRAHRLGISPTTLRDMVGKARAKRRDWRAQRRDLPVKVARDSLWVEDVVWALRVRKTRREFDKWEVSEHRDEWVAILEAATPDNPTVFAAPADHRIAPPLSYTELLEEFTHATCTNNAVSAPRSGGFSSYGSSG-----SERQFSRGREGGGTSTESRCAWNVNDRR-GKYFGACVNMRGYPSGKTHRTPRAASGVNSIYRRSGSAGKMWLTLEARAPSSLLLTPRPGSAAAGMAAGAT------------------TAGSNEWEGEGGVRESTLL----WFPNGGSSGAGGRGWGRRGAQAIPGQEWRLFARKPTPIMAARSTCYAPRRRPPCSIDGRRPIPGITSAD-TVELYEMDGDINSSGFAFVEPAAADLSTTATPLCEPRHELGAK---WGSI-TSAATFDENTDPYHIHAAESG---------IEVSNEDNNNDPHASLPINASSSATPSDRRL--PPESRGTPGVNEAPIAPAGGMAAEPCCRDIWNDE-----GDSEVEWWREAMAP-SLRPEIKCPLFGVAAESDVGVWRGEGGAGGDL-------CGD-------------------------RRPATAPTCGFSTELKQRDLEGRLRQRSSISELEGLAWTRVQAREVALTCARSGTRFRHTIGRDSIRKNFDRSMKEKACETLAVDLRGYGNPLIAPET--TSPRGDKIPPPRPRSST------------TQRNAW------------------------LPGKGGASGRALLRNKPPPFRATRGRTLQQDHVTVAVDQADMWGKCAQANFGRFGEKPYVHCF 706
            V RS +        DL  FV AH LGIS  TLR+MVG+AR+KR +WRA+ +DLP++V RD+LWVEDV+WALRVRKTRREFDKWE++E+RDEWV+ILEAATP+N TVFA P DHRIAPPLS+TELL++ + +     +V +   GG S+  S+G          S+ R G    + S    N ++RR G                          + S+  R  S GKMW  LE+R P+SLLLT RPGSAAA  A G T                      NEW GEGG  + T+     W   GGS GA G G    G   +  QE  LF RKP+P   ARST YAPRRRPPCS DGRR  P + S D T ELYEM+ DIN+S FA  +  A DLS TA      R +  +    WGS+ TSA TFD+     H +A  S          I+ S         AS  + A ++A    +R+  P      P  N+      GG                     S  EWW EA+ P S RP  +  L      +  G  +G GG  G         CG                          R  A AP CGFSTE KQR+LE  L++RSS+ + EGLA  RV+  E  L  A+SGTRFRH IGR +IR+N+D+S+++KACETLA+DLRGYG  L+APET  T P        R  S++              + AW                        LP   GA       +KPPPF   RG T+Q+  +T    QA MWGKC+Q +FGRF EKPYVH F
Sbjct:   35 VVRSAFAAISSRFPDLQVFVGAHGLGISQATLREMVGRARSKRSNWRARGKDLPLRVMRDTLWVEDVMWALRVRKTRREFDKWEINEYRDEWVSILEAATPNNHTVFAPPPDHRIAPPLSFTELLQQDSSSL---PSVLSANPGGSSASVSNGXXXXTGSHLTSQSRGGRNDRSGSTGTGNSSERRIGGAXXXXXXXXXXXXXXXXXXXXXXXSMGSV-TRPVSTGKMWTPLESRLPTSLLLTSRPGSAAA--AVGGTGXXXXXDLAXXXXXXXXXXXXGNEWGGEGGAEDPTVWNFSSWTNGGGSGGANGHGSCEEG-HVVTAQERALFGRKPSPATVARSTSYAPRRRPPCSTDGRRHRPEVGSGDDTAELYEMERDINTSSFALAD--ATDLSITAASHKRGRGDGRSAVRAWGSVATSALTFDDAAGLSHANAEASADSATETSDRIDASASGGGRLRRASGTVTAGATAAAGVKRIGVPTFELSCPEDNDDQDDTGGGRQGXXXXXXXXXXXXXXXXAGSAAEWWCEALGPTSRRPVTRRSLDHSGGVAGRGAPQGTGGTWGPWEEDPGGGCGQHERSGCGWTSDGTVQGGEGYRGGRRRASAAAPNCGFSTESKQRNLEDFLKRRSSMDKSEGLASERVRVWEAGLARAQSGTRFRHQIGRGTIRENYDQSLRDKACETLALDLRGYGTHLLAPETATTIPTAGGGASERCASASGAGVAATGTPTRAMKRAWSSTRIGGXXXXXXXXXXXGGVRLLLPSPTGAGADC---SKPPPFGPVRGTTVQEARITAVTHQAGMWGKCSQGHFGRFEEKPYVHSF 848          
BLAST of mRNA_S-dermatodea_contig8153.16353.1 vs. uniprot
Match: A0A6H5JI14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI14_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 1.820e-60
Identity = 158/336 (47.02%), Postives = 190/336 (56.55%), Query Frame = 0
Query:   14 QDLHAFVRAHRLGISPTTLRDMVGKARAKRRDWRAQRRDLPVKVARDSLWVEDVVWALRVRKTRREFDKWEVSEHRDEWVAILEAATPDNPTVFAAPADHRIAPPLSYTELLEEFTHATCTNNAVSAPRSGGFSSYGSSGSERQF-------SRGREGGGTSTESRCAWNVNDRRGKYFGACVNMRGYPSGKTHRTPRAASGVNSIYRRSGSAGKMWLTLEARAPSSLLLTPRPGSAAAGMA---AGA------TTAGS-------NEWEGEGGVRESTLL----WFPNGGSSGAGGRGWGRRGAQAIPGQEWRLFARKPTPIMAARSTCYAPRRR 322
            +DL  FV AH LGIS  TLR+MVGKAR+KR +WRA+ +DLP++V RD+LWVEDV+WALRVRKTRREFDKWE +EHRDEWV+ILEAATP+N TVFA P DHRIAPPLS+TELL++ + +     +V +   GG S+                 SRG + G +     C                               +   V     R  S GKMW+ LE+R P+SLLLT RPGSA AG+    AGA      TT G+       NEW GEGG  + T+     W   GGS GA G G    G  A   QE  LF RKP+P   ARST YAPR R
Sbjct:   30 EDLQVFVGAHGLGISQATLREMVGKARSKRSNWRARGKDLPLRVMRDTLWVEDVMWALRVRKTRREFDKWEFNEHRDEWVSILEAATPNNHTVFAPPPDHRIAPPLSFTELLQQDSSSL---PSVLSANPGGSSAXXXXXXXXXXXSHLTSQSRGGKKGRSGNTGTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESMGSVT----RPVSTGKMWVPLESRLPTSLLLTSRPGSAEAGVGETGAGACGDLATTTGGTPTVVTGGNEWGGEGGAEDPTVWNFSSWTNGGGSGGANGHGSCGEGHVATA-QERALFGRKPSPATVARSTSYAPRLR 357          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8153.16353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPM5_ECTSI1.620e-14040.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI14_9PHAE1.820e-6047.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8153contigS-dermatodea_contig8153:1140..6441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8153.16353.1mRNA_S-dermatodea_contig8153.16353.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8153 1140..6441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8153.16353.1 ID=prot_S-dermatodea_contig8153.16353.1|Name=mRNA_S-dermatodea_contig8153.16353.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=706bp
VYRSYWRQSEVSLQDLHAFVRAHRLGISPTTLRDMVGKARAKRRDWRAQR
RDLPVKVARDSLWVEDVVWALRVRKTRREFDKWEVSEHRDEWVAILEAAT
PDNPTVFAAPADHRIAPPLSYTELLEEFTHATCTNNAVSAPRSGGFSSYG
SSGSERQFSRGREGGGTSTESRCAWNVNDRRGKYFGACVNMRGYPSGKTH
RTPRAASGVNSIYRRSGSAGKMWLTLEARAPSSLLLTPRPGSAAAGMAAG
ATTAGSNEWEGEGGVRESTLLWFPNGGSSGAGGRGWGRRGAQAIPGQEWR
LFARKPTPIMAARSTCYAPRRRPPCSIDGRRPIPGITSADTVELYEMDGD
INSSGFAFVEPAAADLSTTATPLCEPRHELGAKWGSITSAATFDENTDPY
HIHAAESGIEVSNEDNNNDPHASLPINASSSATPSDRRLPPESRGTPGVN
EAPIAPAGGMAAEPCCRDIWNDEGDSEVEWWREAMAPSLRPEIKCPLFGV
AAESDVGVWRGEGGAGGDLCGDRRPATAPTCGFSTELKQRDLEGRLRQRS
SISELEGLAWTRVQAREVALTCARSGTRFRHTIGRDSIRKNFDRSMKEKA
CETLAVDLRGYGNPLIAPETTSPRGDKIPPPRPRSSTTQRNAWLPGKGGA
SGRALLRNKPPPFRATRGRTLQQDHVTVAVDQADMWGKCAQANFGRFGEK
PYVHCF
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