prot_S-dermatodea_contig8106.16300.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8106.16300.1
Unique Nameprot_S-dermatodea_contig8106.16300.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length339
Homology
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: D8LRP1_ECTSI (Letm1 RBD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP1_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 4.170e-54
Identity = 134/289 (46.37%), Postives = 174/289 (60.21%), Query Frame = 0
Query:   52 MRLGILLVAANLATLPVGSPGTAAGWARGNGRQSAAESSRRLFG-RHGSSSSGRGSSTCSVLAFGRGPSTRVAEKGAGAAAETAAAREVPDLKAGEAQSTAVDASAAXXXXXXXXXXXAVA-EPGFAQGILNTVKGFLVDAKVGSVSLWTNFKVCQDIRKRVKAGHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLDKQLLDANAKLKGKPKREGSRPAKRIESLEMQREEALKILGTGSKK 338
            MRL   L   NLA +  G  GTA GW     + +A  S RR+F  RH      +  S  +V  FGR P T    +  G++   +A   +PD     A       +AA    XXXXX  A A     AQGI+NT + F   A+ G+ +LW NFK  QDIRKRVKAGH +TYAE+AHL+RG+ DRRKLLQ++I YA+SP+ F YV+ YVP LLPSTF KPH +RSKY +L+ ER +AT   ++ L+ +LL A    KGKP+ EGSR +K++E LE QRE  L +L   SK+
Sbjct:    1 MRLSEFLSVLNLAAVAQGGHGTA-GW---GSKSAAVVSDRRVFNDRHR-----QPQSRSAVAFFGRRPRTST-PRVTGSSEAGSAVDALPDASGAGANGVRGSPAAADTSSXXXXXDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFKTSQDIRKRVKAGHVMTYAEHAHLERGATDRRKLLQYLIAYAVSPQNFVYVVWYVPGLLPSTFVKPHTIRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKPREEGSRQSKKMEKLERQREMVLDVLEADSKR 279          
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A836CMC6_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.030e-14
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 0
Query:  191 KVGSVSLWTNFKVCQDIRKRVKA--GHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLDKQLLDANAK 302
            K G    W +F+ C+ IR+R++A     +TY E+  L RG  DR KLLQ  +V+   PE  P+V+ ++P ++PSTFE       +++  +  RV A LA L  +DK+ L+ N K
Sbjct:   32 KAGMTGQWDSFQRCKAIRERLRAPGAAPVTYEEFMALQRGKEDRNKLLQVGVVWVAVPEAIPFVLSFLPGVIPSTFENDADRAQRFRNFNAARVRAALALLDTVDKECLNKNEK 145          
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A8J5XDY7_DIALT (Letm1 RBD domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDY7_DIALT)

HSP 1 Score: 76.6 bits (187), Expect = 3.810e-12
Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 0
Query:  197 LWTNFKVCQDIRKRVKAGHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLDKQLLDAN 300
            LWTNFKV + IR  +KAG  + +A++ HL RG+ DR K+ Q + + ++   + P V ++VPSLLPSTFE   A  ++ +  ++ R AA L  L + D   L A+
Sbjct:   51 LWTNFKVARAIRTDIKAGAAINFADHFHLTRGTIDRGKVFQLIWMASVIKWSTPLVTIFVPSLLPSTFETSAAAAARLEADANVRKAALLELLQKADAGKLPAD 154          
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A1Y1Z8X8_9FUNG (LETM1-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8X8_9FUNG)

HSP 1 Score: 63.5 bits (153), Expect = 1.190e-7
Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 0
Query:  184 KGFLVDAKVGSVSLWTNFKVCQDIRKRVKAGHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLD 293
            K  LV  K G    ++N K+ + ++K+  AG +LT  EY  + R   D RKL+ F  +  + PE  P+++++ PS++PST      + +K ++++ +R A   + L  L+
Sbjct:   88 KELLVFYKNGIKQTFSNKKMAKGLKKKQAAGQELTRKEYQLISRAFADSRKLVPFAFLLVLFPEAIPFILVFAPSVVPSTCITEKQMENKIKKVNEKRQAIVQSVLDSLE 197          
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A1Z5JSS5_FISSO (LETM1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSS5_FISSO)

HSP 1 Score: 55.5 bits (132), Expect = 6.550e-5
Identity = 40/158 (25.32%), Postives = 69/158 (43.67%), Query Frame = 0
Query:  175 FAQGILNTVKGFLVDAKVGSVS----LWTNFKVCQDIRKRVKAGHQ----------------------------LTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHA-----VRSKYQQLSHERVAATLAGLSQLDKQ 295
            F + ++  V  +  D+ V + +    LWTN + C DIRK+ K+                               +++ +Y  L +G  DR K+L  V +   +P   PY + + P LLPSTF+   A       +  Q+ + ER  + L+ L+ L++Q
Sbjct:   19 FGENVIVQVATYAKDSVVKTATSCKQLWTNHQKCNDIRKQQKSFRDGCIERWESQGAPETRKELQKKASSIQGGISFDDYIFLQKGKEDRGKVLNMVFLMWGAPRFLPYALWFNPDLLPSTFKNDAANADTTYETTAQRFARERTVSILSTLANLERQ 176          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LRP1_ECTSI4.170e-5446.37Letm1 RBD domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CMC6_9STRA5.030e-1437.72LETM1 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A8J5XDY7_DIALT3.810e-1240.38Letm1 RBD domain-containing protein n=1 Tax=Diacro... [more]
A0A1Y1Z8X8_9FUNG1.190e-730.00LETM1-domain-containing protein n=1 Tax=Basidiobol... [more]
A0A1Z5JSS5_FISSO6.550e-525.32LETM1 domain-containing protein n=2 Tax=Fistulifer... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011685LETM1-likePFAMPF07766LETM1coord: 190..296
e-value: 2.1E-10
score: 40.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8106contigS-dermatodea_contig8106:756..5078 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8106.16300.1mRNA_S-dermatodea_contig8106.16300.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8106 756..5078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8106.16300.1 ID=prot_S-dermatodea_contig8106.16300.1|Name=mRNA_S-dermatodea_contig8106.16300.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=339bp
NVLYKVLRLLYPWDIALSGNATACGTATHQQQPTYAAGAPLRVRRERHLY
IMRLGILLVAANLATLPVGSPGTAAGWARGNGRQSAAESSRRLFGRHGSS
SSGRGSSTCSVLAFGRGPSTRVAEKGAGAAAETAAAREVPDLKAGEAQST
AVDASAAAAAAGSTGAAAAVAEPGFAQGILNTVKGFLVDAKVGSVSLWTN
FKVCQDIRKRVKAGHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFP
YVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLDKQLLDAN
AKLKGKPKREGSRPAKRIESLEMQREEALKILGTGSKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011685LETM1