mRNA_S-dermatodea_contig8106.16300.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: D8LRP1_ECTSI (Letm1 RBD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP1_ECTSI) HSP 1 Score: 193 bits (491), Expect = 4.170e-54 Identity = 134/289 (46.37%), Postives = 174/289 (60.21%), Query Frame = 1
Query: 154 MRLGILLVAANLATLPVGSPGTAAGWARGNGRQSAAESSRRLFG-RHGSSSSGRGSSTCSVLAFGRGPSTRVAEKGAGAAAETAAAREVPDLKAGEAQSTAVDASAAXXXXXXXXXXXAVA-EPGFAQGILNTVKGFLVDAKVGSVSLWTNFKVCQDIRKRVKAGHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLDKQLLDANAKLKGKPKREGSRPAKRIESLEMQREEALKILGTGSKK 1014
MRL L NLA + G GTA GW + +A S RR+F RH + S +V FGR P T + G++ +A +PD A +AA XXXXX A A AQGI+NT + F A+ G+ +LW NFK QDIRKRVKAGH +TYAE+AHL+RG+ DRRKLLQ++I YA+SP+ F YV+ YVP LLPSTF KPH +RSKY +L+ ER +AT ++ L+ +LL A KGKP+ EGSR +K++E LE QRE L +L SK+
Sbjct: 1 MRLSEFLSVLNLAAVAQGGHGTA-GW---GSKSAAVVSDRRVFNDRHR-----QPQSRSAVAFFGRRPRTST-PRVTGSSEAGSAVDALPDASGAGANGVRGSPAAADTSSXXXXXDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFKTSQDIRKRVKAGHVMTYAEHAHLERGATDRRKLLQYLIAYAVSPQNFVYVVWYVPGLLPSTFVKPHTIRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKPREEGSRQSKKMEKLERQREMVLDVLEADSKR 279
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A836CMC6_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC6_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 5.030e-14 Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 571 KVGSVSLWTNFKVCQDIRKRVKA--GHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLDKQLLDANAK 906
K G W +F+ C+ IR+R++A +TY E+ L RG DR KLLQ +V+ PE P+V+ ++P ++PSTFE +++ + RV A LA L +DK+ L+ N K
Sbjct: 32 KAGMTGQWDSFQRCKAIRERLRAPGAAPVTYEEFMALQRGKEDRNKLLQVGVVWVAVPEAIPFVLSFLPGVIPSTFENDADRAQRFRNFNAARVRAALALLDTVDKECLNKNEK 145
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A8J5XDY7_DIALT (Letm1 RBD domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDY7_DIALT) HSP 1 Score: 76.6 bits (187), Expect = 3.810e-12 Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 589 LWTNFKVCQDIRKRVKAGHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLDKQLLDAN 900
LWTNFKV + IR +KAG + +A++ HL RG+ DR K+ Q + + ++ + P V ++VPSLLPSTFE A ++ + ++ R AA L L + D L A+
Sbjct: 51 LWTNFKVARAIRTDIKAGAAINFADHFHLTRGTIDRGKVFQLIWMASVIKWSTPLVTIFVPSLLPSTFETSAAAAARLEADANVRKAALLELLQKADAGKLPAD 154
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A1Y1Z8X8_9FUNG (LETM1-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8X8_9FUNG) HSP 1 Score: 63.5 bits (153), Expect = 1.190e-7 Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = 1
Query: 550 KGFLVDAKVGSVSLWTNFKVCQDIRKRVKAGHQLTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHAVRSKYQQLSHERVAATLAGLSQLD 879
K LV K G ++N K+ + ++K+ AG +LT EY + R D RKL+ F + + PE P+++++ PS++PST + +K ++++ +R A + L L+
Sbjct: 88 KELLVFYKNGIKQTFSNKKMAKGLKKKQAAGQELTRKEYQLISRAFADSRKLVPFAFLLVLFPEAIPFILVFAPSVVPSTCITEKQMENKIKKVNEKRQAIVQSVLDSLE 197
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Match: A0A1Z5JSS5_FISSO (LETM1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSS5_FISSO) HSP 1 Score: 55.5 bits (132), Expect = 6.550e-5 Identity = 40/158 (25.32%), Postives = 69/158 (43.67%), Query Frame = 1
Query: 523 FAQGILNTVKGFLVDAKVGSVS----LWTNFKVCQDIRKRVKAGHQ----------------------------LTYAEYAHLDRGSNDRRKLLQFVIVYAISPETFPYVILYVPSLLPSTFEKPHA-----VRSKYQQLSHERVAATLAGLSQLDKQ 885
F + ++ V + D+ V + + LWTN + C DIRK+ K+ +++ +Y L +G DR K+L V + +P PY + + P LLPSTF+ A + Q+ + ER + L+ L+ L++Q
Sbjct: 19 FGENVIVQVATYAKDSVVKTATSCKQLWTNHQKCNDIRKQQKSFRDGCIERWESQGAPETRKELQKKASSIQGGISFDDYIFLQKGKEDRGKVLNMVFLMWGAPRFLPYALWFNPDLLPSTFKNDAANADTTYETTAQRFARERTVSILSTLANLERQ 176 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8106.16300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8106.16300.1 >prot_S-dermatodea_contig8106.16300.1 ID=prot_S-dermatodea_contig8106.16300.1|Name=mRNA_S-dermatodea_contig8106.16300.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=339bp NVLYKVLRLLYPWDIALSGNATACGTATHQQQPTYAAGAPLRVRRERHLYback to top mRNA from alignment at S-dermatodea_contig8106:756..5078- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8106.16300.1 ID=mRNA_S-dermatodea_contig8106.16300.1|Name=mRNA_S-dermatodea_contig8106.16300.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4323bp|location=Sequence derived from alignment at S-dermatodea_contig8106:756..5078- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8106:756..5078- >mRNA_S-dermatodea_contig8106.16300.1 ID=mRNA_S-dermatodea_contig8106.16300.1|Name=mRNA_S-dermatodea_contig8106.16300.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at S-dermatodea_contig8106:756..5078- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |