prot_S-dermatodea_contig803.16215.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig803.16215.1
Unique Nameprot_S-dermatodea_contig803.16215.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length230
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig803.16215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 9..200
e-value: 1.5E-9
score: 38.8
IPR008615FNIPPFAMPF05725FNIPcoord: 7..39
e-value: 4.3E-5
score: 23.6
coord: 85..127
e-value: 5.0E-9
score: 36.2
coord: 151..194
e-value: 4.4E-9
score: 36.4
coord: 41..81
e-value: 4.5E-5
score: 23.5
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 49..153
coord: 7..42
coord: 93..197
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 49..153
coord: 7..42
coord: 93..197
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 45..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig803contigS-dermatodea_contig803:21723..22412 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig803.16215.1mRNA_S-dermatodea_contig803.16215.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig803 21534..22885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig803.16215.1 ID=prot_S-dermatodea_contig803.16215.1|Name=mRNA_S-dermatodea_contig803.16215.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=230bp
MDGVTWPASLQRLKFGDRFDQPIDGVTWPASLQQLQFGQDFDQPVDGVTW
PASLQQLWFGDRFNQPIDDVTWPASLQQLIFWHDFNQPIESVTWPTSLEQ
LRLSNDFNQPIDRVTWPASLQQLQFGHCFNQPIDGVTWPTSLQQLHFDCD
FNQPIAGVTWPTSLLCLDFGRHFNQPIESVAWPTSLEQLQFGYDFHRHRP
MDGVFWATWRSGHWAGLKFMPIGNTCWSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP