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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1352 |
| Cds size | 690 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622925315.2020473-CDS-S-dermatodea_contig803:21722..22412 | 1622925315.2020473-CDS-S-dermatodea_contig803:21722..22412 | Saccorhiza dermatodea SderLu1190fm monoicous | CDS | S-dermatodea_contig803 21723..22412 + |
| 1694079849.5990155-CDS-S-dermatodea_contig803:21722..22412 | 1694079849.5990155-CDS-S-dermatodea_contig803:21722..22412 | Saccorhiza dermatodea SderLu1190fm monoicous | CDS | S-dermatodea_contig803 21723..22412 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig803.16215.1 >prot_S-dermatodea_contig803.16215.1 ID=prot_S-dermatodea_contig803.16215.1|Name=mRNA_S-dermatodea_contig803.16215.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=230bp
MDGVTWPASLQRLKFGDRFDQPIDGVTWPASLQQLQFGQDFDQPVDGVTW
PASLQQLWFGDRFNQPIDDVTWPASLQQLIFWHDFNQPIESVTWPTSLEQ
LRLSNDFNQPIDRVTWPASLQQLQFGHCFNQPIDGVTWPTSLQQLHFDCD
FNQPIAGVTWPTSLLCLDFGRHFNQPIESVAWPTSLEQLQFGYDFHRHRP
MDGVFWATWRSGHWAGLKFMPIGNTCWSF* back to topmRNA from alignment at S-dermatodea_contig803:21534..22885+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig803.16215.1 ID=mRNA_S-dermatodea_contig803.16215.1|Name=mRNA_S-dermatodea_contig803.16215.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1352bp|location=Sequence derived from alignment at S-dermatodea_contig803:21534..22885+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTAAAGTGGCCGGCCTCGCTTCAGCGGTTGAGTTTCGGCGACCTCTTCGA
CCAGCCAATCGACGGTGTATCGTGGCCGGCGTCGCTTCAACAGGTGCGCT
TTGGCTGCGGTTTCAACCAGCCGATCGACGGTGTAACTTGGCCGGCGTCG
CTTCAACAGGTGACGTTCGGCTACTGCTTCGGCAAGCCGATGGATGGTGT
AACGTGGCCGGCCTCGCTTCAGCGGTTGAAGTTCGGCGACCGCTTCGACC
AGCCGATCGACGGTGTAACGTGGCCGGCATCGCTTCAGCAGCTGCAGTTC
GGCCAAGATTTCGACCAGCCGGTCGACGGTGTAACGTGGCCGGCGTCGCT
TCAACAGCTGTGGTTCGGCGACCGCTTCAACCAGCCGATCGACGATGTAA
CGTGGCCGGCGTCGCTTCAGCAGCTGATATTCTGGCACGATTTTAACCAG
CCGATCGAGAGTGTAACGTGGCCGACGTCACTTGAACAGCTGCGGCTCAG
CAACGACTTCAACCAGCCGATCGACCGTGTAACGTGGCCGGCGTCGCTTC
AACAGCTGCAGTTCGGCCACTGCTTCAACCAGCCGATCGACGGTGTAACG
TGGCCGACGTCGCTTCAACAGCTCCACTTCGACTGCGATTTCAACCAGCC
GATCGCCGGTGTAACGTGGCCGACGTCGCTTCTATGTCTGGACTTCGGGC
GCCATTTCAACCAGCCGATCGAGAGTGTGGCGTGGCCGACGTCGCTTGAA
CAGCTGCAGTTCGGCTACGACTTCCACCGGCACCGGCCGATGGACGGCGT
GTTTTGGGCGACATGGCGGTCCGGCCATTGGGCTGGCCTAAAATTTATGC
CTATCGGAAATACCTGCTGGAGTTTCTAGGGCATATACAAACTGGTAAAG
TCCCCTCCTGGGGAATCGACCAAATCGTATTGCCATGCGCGTGAAACCGC
GGTGTCCATGGCGGATGCGTATCATACAGCTGTCCGAGAGTGCTTTGGCT
CGACTCTCGGTTCGAAAATATGGGGAGCACGCTTGGGTCGTGTGGTGCAG
AAAAATACGGTAAATGAGAGTGATAAGCTTTCCCGACTGGAGGGTTGCAG
CGAACGGCGCGAGCGGGGAATAACACGCGCCTGGCACACGTAACCCATCC
CTGCCCTAGTAGCCTTATAAATATAATGAGAGGTTAATTGTGTACGCCAC
CACCTGTCGCAGCAGCCGCCTGAGCTCGCAGGTGGCGGCGTTCGCTCACG
CGTGTGTTGCACACGTCGACATGTTGCGTTACGTGTTTAGAACAAATGGC
GGTGGCAGTCTGGCATCCATCACCCGCGTTGCGATCATCTGAGAGCGAGT
GC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig803:21534..22885+ >mRNA_S-dermatodea_contig803.16215.1 ID=mRNA_S-dermatodea_contig803.16215.1|Name=mRNA_S-dermatodea_contig803.16215.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at S-dermatodea_contig803:21534..22885+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGATGGTGTAACGTGGCCGGCCTCGCTTCAGCGGTTGAAGTTCGGCGA
CCGCTTCGACCAGCCGATCGACGGTGTAACGTGGCCGGCATCGCTTCAGC
AGCTGCAGTTCGGCCAAGATTTCGACCAGCCGGTCGACGGTGTAACGTGG
CCGGCGTCGCTTCAACAGCTGTGGTTCGGCGACCGCTTCAACCAGCCGAT
CGACGATGTAACGTGGCCGGCGTCGCTTCAGCAGCTGATATTCTGGCACG
ATTTTAACCAGCCGATCGAGAGTGTAACGTGGCCGACGTCACTTGAACAG
CTGCGGCTCAGCAACGACTTCAACCAGCCGATCGACCGTGTAACGTGGCC
GGCGTCGCTTCAACAGCTGCAGTTCGGCCACTGCTTCAACCAGCCGATCG
ACGGTGTAACGTGGCCGACGTCGCTTCAACAGCTCCACTTCGACTGCGAT
TTCAACCAGCCGATCGCCGGTGTAACGTGGCCGACGTCGCTTCTATGTCT
GGACTTCGGGCGCCATTTCAACCAGCCGATCGAGAGTGTGGCGTGGCCGA
CGTCGCTTGAACAGCTGCAGTTCGGCTACGACTTCCACCGGCACCGGCCG
ATGGACGGCGTGTTTTGGGCGACATGGCGGTCCGGCCATTGGGCTGGCCT
AAAATTTATGCCTATCGGAAATACCTGCTGGAGTTTCTAGATGGATGGTG
TAACGTGGCCGGCCTCGCTTCAGCGGTTGAAGTTCGGCGACCGCTTCGAC
CAGCCGATCGACGGTGTAACGTGGCCGGCATCGCTTCAGCAGCTGCAGTT
CGGCCAAGATTTCGACCAGCCGGTCGACGGTGTAACGTGGCCGGCGTCGC
TTCAACAGCTGTGGTTCGGCGACCGCTTCAACCAGCCGATCGACGATGTA
ACGTGGCCGGCGTCGCTTCAGCAGCTGATATTCTGGCACGATTTTAACCA
GCCGATCGAGAGTGTAACGTGGCCGACGTCACTTGAACAGCTGCGGCTCA
GCAACGACTTCAACCAGCCGATCGACCGTGTAACGTGGCCGGCGTCGCTT
CAACAGCTGCAGTTCGGCCACTGCTTCAACCAGCCGATCGACGGTGTAAC
GTGGCCGACGTCGCTTCAACAGCTCCACTTCGACTGCGATTTCAACCAGC
CGATCGCCGGTGTAACGTGGCCGACGTCGCTTCTATGTCTGGACTTCGGG
CGCCATTTCAACCAGCCGATCGAGAGTGTGGCGTGGCCGACGTCGCTTGA
ACAGCTGCAGTTCGGCTACGACTTCCACCGGCACCGGCCGATGGACGGCG
TGTTTTGGGCGACATGGCGGTCCGGCCATTGGGCTGGCCTAAAATTTATG
CCTATCGGAAATACCTGCTGGAGTTTCTAG back to top
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