prot_S-dermatodea_contig7992.16179.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig7992.16179.1
Unique Nameprot_S-dermatodea_contig7992.16179.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length495
Homology
BLAST of mRNA_S-dermatodea_contig7992.16179.1 vs. uniprot
Match: A0A6H5K2S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2S4_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 2.280e-123
Identity = 250/506 (49.41%), Postives = 302/506 (59.68%), Query Frame = 0
Query:    8 RVGRTWKEKQRTRVPCVDLDDNPFCIERRVNEELHTIQLNRNPSLAHLTSADVRRTASFVVDDAKPFRDFSRKKRHLLAWSLRSASASEVSPRKPAQKA----TRKSNTVPPRLGGHDVDVNHLFAQKEKRRRR----RDGADVDVDTMPNLEPYRREVVAQQPTTFGHRPISASRMFNPSTMATTF-TPSGGDGNNGSGVNSSRIRGRGAHKQTATNSSKRGGKARRAPGLSAPMLKELLLGNKKRGAGFGMTPALAASRGPGADGGIAQDFESRGKELGRGRFGA-GYVVLDSQDEL------SETLNGSLG-SVDP----GVLQDLKATWLTSSSREGPRKRKHLKGGCIEETELRRIFHADRPPWDETPAPLPVPREVRRAVSSLLMPDPDERLRDKLIKSRKAAAGIPVTASSIKEERERSTQP--ETSSGRWELPPATPRMVIARDEVKRLVEDRRERDSAMARRVRQAELSVFYNKILPSEERYRDTLARGSTRFKPAG 490
            R+  TWK++QRTRVP VDLDDNPFC+ERR NEE H +QLN+                       KPFR+FSRKKR+LLAWS+R+ASAS+ + +  A K      R S TV   L G   D+   F  +     R     D  +VDVDT+P LEPYRREVVAQQP TFGHRP+SASRMFNP TMAT+   PS G   +  G+   R +G G H         R  K RR  GLSAPMLK LL G+   G G       +  +         + FE  G  + R       Y+VLD Q++L      SE L+ S   SVD       L +L++ WL +SS  G    +   G   E  EL RIF ++RPPWD  PAPLP P+  RRA+SSLLMPDPDERLRDKLIKSRKAAAG+PVTASS K+ERER  +P   T  GRWE+ PATPR VIAR E++RL E R ERD AMA++VRQAELSV + KI PSE+ YR+TL     RF+  G
Sbjct:   17 RLAMTWKDRQRTRVPVVDLDDNPFCVERRTNEEWHMMQLNK-----------------------KPFREFSRKKRNLLAWSIRAASASDAAAQSTANKTHMPTRRLSTTVRSDLDG--TDIGEFFNMERGMSGRVLHPTDRVEVDVDTLPTLEPYRREVVAQQPITFGHRPLSASRMFNPCTMATSCGIPSDGHHPSTGGIRG-RKKGGGGHXXXXXXXRGRNSKPRRTTGLSAPMLKALLRGDTPTGEGGAALVTASQHQ--------QELFEPNGNIVSRDSAPKPNYLVLDGQEDLTDSSVNSEKLDESKWRSVDDLGRGEALGELES-WLQTSSHSGLGHGRRRLGNTKEGQELHRIFSSERPPWDGAPAPLPAPQHTRRAISSLLMPDPDERLRDKLIKSRKAAAGVPVTASSTKDERERELRPFNPTPIGRWEVCPATPRAVIARQEIRRLSELREERDRAMAKKVRQAELSVLFKKIAPSEKLYRNTLQIAQERFRHQG 487          
BLAST of mRNA_S-dermatodea_contig7992.16179.1 vs. uniprot
Match: A0A8K1C8G0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8G0_PYTOL)

HSP 1 Score: 58.2 bits (139), Expect = 1.310e-5
Identity = 56/187 (29.95%), Postives = 77/187 (41.18%), Query Frame = 0
Query:   16 KQRTRVPCVDLDDNPFCIERRVNEELHTIQLNRNPSLAHLT--------SADVRRTASFVVDDAKPFRDFSRKKRHLLAWSLRSASASEVSPRKPAQKATRKSNTVPPRLGGHDVDVNHLFAQKEKRRRRRDGADVDVDTMPNLEPYRREVVAQQPTTFGHRPISASRMFNPSTMA-TTFTPSGGDG 193
            K+R RVP VD+D NPFC+ER++ +E      N+NP     T          +    +SF+ D A          R  +     + SA  VS +     A    +  P  L    +  NH  + ++          V     P    Y       QP +FGHRP SASRM++P T   TT   S GDG
Sbjct:   31 KKRVRVPRVDVDANPFCVERQLADEYALHNFNKNPRFYLNTIKQSPPRIEKNPHNHSSFINDAADMMASSGFSPR--IRAEFTTPSAPSVSYKPMDYVAPSVISVDPSDL--RSIPKNHPLSPEKN------AVHVVSKFTPPTHAYYGSHKTTQPVSFGHRPDSASRMYDPLTSGLTTSRSSTGDG 207          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig7992.16179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2S4_9PHAE2.280e-12349.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1C8G0_PYTOL1.310e-529.95Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig7992contigS-dermatodea_contig7992:4282..8618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig7992.16179.1mRNA_S-dermatodea_contig7992.16179.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig7992 4282..8618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig7992.16179.1 ID=prot_S-dermatodea_contig7992.16179.1|Name=mRNA_S-dermatodea_contig7992.16179.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=495bp
MPLPRVGRVGRTWKEKQRTRVPCVDLDDNPFCIERRVNEELHTIQLNRNP
SLAHLTSADVRRTASFVVDDAKPFRDFSRKKRHLLAWSLRSASASEVSPR
KPAQKATRKSNTVPPRLGGHDVDVNHLFAQKEKRRRRRDGADVDVDTMPN
LEPYRREVVAQQPTTFGHRPISASRMFNPSTMATTFTPSGGDGNNGSGVN
SSRIRGRGAHKQTATNSSKRGGKARRAPGLSAPMLKELLLGNKKRGAGFG
MTPALAASRGPGADGGIAQDFESRGKELGRGRFGAGYVVLDSQDELSETL
NGSLGSVDPGVLQDLKATWLTSSSREGPRKRKHLKGGCIEETELRRIFHA
DRPPWDETPAPLPVPREVRRAVSSLLMPDPDERLRDKLIKSRKAAAGIPV
TASSIKEERERSTQPETSSGRWELPPATPRMVIARDEVKRLVEDRRERDS
AMARRVRQAELSVFYNKILPSEERYRDTLARGSTRFKPAGAKDL*
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