prot_S-dermatodea_contig79755.16168.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig79755.16168.1
Unique Nameprot_S-dermatodea_contig79755.16168.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length145
Homology
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5KSA0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA0_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.690e-31
Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD +LD+L  G+ +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDDAI FD+ P  HV  L  FF RLR+Y L LSP  +R+G T   FLG
Sbjct:   43 VNYKRLNALVDLDGQPLPRVDGILDSLYTGNVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDAICFDEEPLGHVLNLMEFFKRLRQYNLKLSPGKARVGATHASFLG 187          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5KLN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN7_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.860e-31
Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +  VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP  +R+G T  +FLG
Sbjct:   43 VSYKRLNALVDLDGQPLHRVDVILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLG 187          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5KB53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB53_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 4.030e-31
Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++  +    +P VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP   R+G T  +FLG
Sbjct:  169 VNYKRLNALVDSDGQPLPRVDGILDSLHTGKVFSIFDLNSASHQIVCDENTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLG 313          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5K9P3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9P3_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 6.980e-31
Identity = 61/145 (42.07%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L    +YLDD I FDK P  HV  +  FF RL +Y L LSP  +R+  T  +F G
Sbjct:   67 VNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDDETVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLDRVLVYLDDVICFDKEPLRHVLNMIEFFKRLHQYNLKLSPGKARVSATHANFFG 211          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5L4V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V5_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.590e-30
Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP  +R+G T  +FLG
Sbjct:  111 VNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLG 255          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5JVW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW3_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.970e-30
Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP  +R+G T  +FLG
Sbjct:  762 VNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDKDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKARVGATHANFLG 906          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5L5J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J9_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.980e-30
Identity = 64/145 (44.14%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD++LD L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP   R+G T  +FLG
Sbjct:   43 VNYKRLNALVDLDGQPLPRVDDILDFLYTGKVFSIFDLNSAFHQIESDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLG 187          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5L8P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P3_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.610e-30
Identity = 64/145 (44.14%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP   R+G T  +FLG
Sbjct:  244 VNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDAVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLG 388          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5KDC1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC1_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.640e-30
Identity = 64/145 (44.14%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP   R+G T  +FLG
Sbjct:  146 VNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLG 290          
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Match: A0A6H5JSI4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI4_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 2.650e-30
Identity = 64/145 (44.14%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPRSVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDDAIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG 145
            +  ++LN++       +P VD +LD+L  G  +S+ +L S   Q+  D  +V LTAF +PT L+ WL MPQGA  +PSWFV V+  V   L     YLDD I FD+ P  HV  L  FF RLR+Y L LSP   R+G T  +FLG
Sbjct:  621 VNYKRLNALVDLDGQPLPRVDGILDSLYTGKVFSIFDLNSAFHQIVCDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEFFKRLRQYNLKLSPGKGRVGATHANFLG 765          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig79755.16168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSA0_9PHAE1.690e-3144.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KLN7_9PHAE2.860e-3143.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KB53_9PHAE4.030e-3144.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9P3_9PHAE6.980e-3142.07Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L4V5_9PHAE1.590e-3044.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVW3_9PHAE1.970e-3044.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5J9_9PHAE1.980e-3044.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8P3_9PHAE2.610e-3044.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDC1_9PHAE2.640e-3044.14Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JSI4_9PHAE2.650e-3044.14Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 15..145
e-value: 4.5E-28
score: 100.1
NoneNo IPR availableGENE3D3.10.10.10coord: 3..75
e-value: 4.5E-28
score: 100.1
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 3..145
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 59..145
e-value: 7.5E-9
score: 35.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig79755contigS-dermatodea_contig79755:370..804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig79755.16168.1mRNA_S-dermatodea_contig79755.16168.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig79755 370..804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig79755.16168.1 ID=prot_S-dermatodea_contig79755.16168.1|Name=mRNA_S-dermatodea_contig79755.16168.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=145bp
IQLQKLNSITKTSKIAIPGVDEVLDTLGGGSAWSVSNLLSGCSQLTMDPR
SVDLTAFFSPTGLYSWLCMPQGAACAPSWFVNVMRVVTDDLRNFRMYLDD
AIGFDKIPPPHVATLASFFARLRRYRLILSPPSSRIGVTTVDFLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom