prot_S-dermatodea_contig79745.16165.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig79745.16165.1
Unique Nameprot_S-dermatodea_contig79745.16165.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length78
Homology
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BLAST of mRNA_S-dermatodea_contig79745.16165.1 vs. uniprot
Match: A0A8F0K175_9PHAE (Ribosomal protein S4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K175_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.800e-16
Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 0 
Query:    1 NIFEFCQSFRPYIRKRLLSERSYRIRYANRYKQKPIPWILTEYSSLNFMFISDIKPFLFYPYRFDLDELVSFANFGY 77
            +I EFC SFRP++   L+    +R R ++R  +    W+L +YS+L F+    IKPFLFYPYRF+LDEL+SFAN+GY
Sbjct:  160 DIVEFCPSFRPFMHDYLVYRSKFRYR-SDRLIRLSSRWVLCDYSNLFFIINGSIKPFLFYPYRFELDELISFANYGY 235
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig79745.16165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8F0K175_9PHAE3.800e-1650.65Ribosomal protein S4 n=1 Tax=Protohalopteris sp. T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig79745contigS-dermatodea_contig79745:12..245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig79745.16165.1mRNA_S-dermatodea_contig79745.16165.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig79745 12..245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig79745.16165.1 ID=prot_S-dermatodea_contig79745.16165.1|Name=mRNA_S-dermatodea_contig79745.16165.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=78bp
NIFEFCQSFRPYIRKRLLSERSYRIRYANRYKQKPIPWILTEYSSLNFMF
ISDIKPFLFYPYRFDLDELVSFANFGY*
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