prot_S-dermatodea_contig13688.2129.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig13688.2129.1
Unique Nameprot_S-dermatodea_contig13688.2129.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length238
Homology
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BLAST of mRNA_S-dermatodea_contig13688.2129.1 vs. uniprot
Match: D8LTS1_ECTSI (Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS1_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 1.470e-44
Identity = 122/204 (59.80%), Postives = 140/204 (68.63%), Query Frame = 0 
Query:   29 LREKIAELEKALEGEKAAAKVAVAAAAVGAGQSGDVEMAEH------ERRDEEEMRKVLGELEAALSRERQERERAVLERDRSEELVKRMSKQLKSRGQAAA-------EDADATAITQNGGTTAVASENGDEDGDGLLAGLNNEDMMIGNLTQVLEEEREARRAAEEENTRLQREADNAMDSDRAQAKLVQNLTLELEEARKA 219
            LR  +A+LEK      +A K AVA AA  AG +              E ++   +RK LGELEAALSRERQERERAVL+RDRSEEL KRMSK LK+RG +AA       ED  +   T NG +  + SENGDEDGD LL G+NNEDMMI NL+QVL+EEREARR AEEEN RLQ EAD A D+ RAQAK VQ LTLELE+ARKA
Sbjct: 1216 LRATVAKLEKEXXXXXSALKAAVAKAAGTAGGASKXXXXXXXXXXXXEEKESAFLRKQLGELEAALSRERQERERAVLDRDRSEELAKRMSKSLKNRGMSAAASAGEDGEDGGSLKGTTNG-SAVLGSENGDEDGDDLLVGMNNEDMMISNLSQVLDEEREARRTAEEENARLQTEADAATDAQRAQAKAVQTLTLELEDARKA 1418
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BLAST of mRNA_S-dermatodea_contig13688.2129.1 vs. uniprot
Match: A0A6H5KVF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF9_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 6.620e-42
Identity = 106/152 (69.74%), Postives = 119/152 (78.29%), Query Frame = 0 
Query:   77 MRKVLGELEAALSRERQERERAVLERDRSEELVKRMSKQLKSRGQAAA-------EDADATAITQNGGTTAVASENGDE--DGDGLLAGLNNEDMMIGNLTQVLEEEREARRAAEEENTRLQREADNAMDSDRAQAKLVQNLTLELEEARKA 219
            +RK LGELEAALSRERQERERAVL+RDRSEEL KRMSK LK+RG +AA       ED  +   T NG +  + SENGDE  DGD LL G+NNEDMMI NL+QVL+EEREARR AEEEN RLQ EAD A D+ RAQAK+VQ LTLELE+ARKA
Sbjct:  550 LRKQLGELEAALSRERQERERAVLDRDRSEELAKRMSKSLKNRGMSAAASAGEEGEDGGSPKRTTNG-SGVLGSENGDEASDGDDLLVGMNNEDMMISNLSQVLDEEREARRTAEEENARLQTEADAATDAQRAQAKVVQTLTLELEDARKA 700
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13688.2129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTS1_ECTSI1.470e-4459.80Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5KVF9_9PHAE6.620e-4269.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableCOILSCoilCoilcoord: 164..198
NoneNo IPR availableCOILSCoilCoilcoord: 206..233
NoneNo IPR availableCOILSCoilCoilcoord: 74..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13688contigS-dermatodea_contig13688:283..4759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13688.2129.1mRNA_S-dermatodea_contig13688.2129.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig13688 283..4759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig13688.2129.1 ID=prot_S-dermatodea_contig13688.2129.1|Name=mRNA_S-dermatodea_contig13688.2129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=238bp
SRALASAASVSSNSASSPAGYDGEGDRLLREKIAELEKALEGEKAAAKVA
VAAAAVGAGQSGDVEMAEHERRDEEEMRKVLGELEAALSRERQERERAVL
ERDRSEELVKRMSKQLKSRGQAAAEDADATAITQNGGTTAVASENGDEDG
DGLLAGLNNEDMMIGNLTQVLEEEREARRAAEEENTRLQREADNAMDSDR
AQAKLVQNLTLELEEARKAKDKAEQSAAMAAASAAALV
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